Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-19f21.8

Gene Name Gene ID Reads Annotation
si:dkey-19f21.8 si:dkey-19f21.8 12










Genes with expression patterns similar to si:dkey-19f21.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-19f21.8 si:dkey-19f21.8 12 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. FAM184A ENSDARG00000014081 34 2.722 - 1.000 - - - 0.722 1.000 - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
3. CU914780.1 ENSDARG00000114023 105 2 - 1.000 - - - 1.000 - - -
4. FRMPD1 34 1.956 - 1.000 - - - 0.956 - - - FERM and PDZ domain containing 1, transcript variant X3
5. st8sia1_1 ENSDARG00000098221 16 1.94 - 1.000 - - - 0.940 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
6. lingo1b ENSDARG00000035899 86 1.939 - 1.000 - - - 0.939 - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
7. otpb ENSDARG00000058379 1143 1.922 - 1.000 - - - 0.922 - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
8. si:ch73-127m5.1 ENSDARG00000060680 253 1.916 - 1.000 - - - 0.916 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
9. penka ENSDARG00000004869 161 1.909 - 0.991 - - - 0.918 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
10. hoxc9a ENSDARG00000092809 18 1.847 - 1.000 - - - - - - 0.847 homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
11. si:ch211-113a14.15_1 2 1.836 - 1.000 - - - - 0.836 - - si:ch211-113a14.15
12. SNORA81_1 SNORA81_1 8 1.836 - 1.000 - - - - 0.836 - -
13. sox17 ENSDARG00000101717 11 1.836 - 1.000 - - - - 0.836 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
14. TMEM74 26 1.822 - 1.000 - - - 0.822 - - - transmembrane protein 74, transcript variant X3
15. C18H15orf59 C18H15orf59 80 1.816 - 1.000 - - - 0.816 - - -
16. mir219-1 101 1.794 - - - - 0.848 0.946 - - - microRNA 219-1
17. cyp46a4 cyp46a4 5 1.774 - 1.000 0.774 - - - - - -
18. RNF214_1 RNF214_1 5 1.773 - 1.000 0.773 - - - - - -
19. BX548000.1 ENSDARG00000099044 45 1.764 - 1.000 - - - 0.764 - - -
20. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1.764 - 1.000 - - - 0.764 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
21. GJD2_1 GJD2_1 3045 1.762 - 1.000 - - - 0.762 - - -
22. kcnk10b ENSDARG00000045956 43 1.756 - 1.000 - - - 0.756 - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
23. hbaa2 ENSDARG00000069735 10 1.755 - - - 0.919 - - 0.836 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
24. fam219ab ENSDARG00000013813 591 1.741 - 1.000 - - - 0.741 - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
25. fkbp5 ENSDARG00000028396 20 1.74 - - - 0.830 0.910 - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
26. si:ch211-38m6.6 ENSDARG00000076959 12 1.728 - 1.000 - - - - - - 0.728 si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
27. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.725 - 1.000 - - - 0.725 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
28. AGAP2 ENSDARG00000099874 151 1.721 - 1.000 - - - 0.721 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
29. ENSDARG00000074422 ENSDARG00000074422 61 1.717 - - - - 0.881 - 0.836 - -
30. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.709 - 1.000 - - - 0.709 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
31. zic6 ENSDARG00000071496 402 1.704 - 0.907 - - - 0.797 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
32. si:ch211-113a14.26_1 5 1.703 - - - 0.793 0.910 - - - - si:ch211-113a14.26
33. si:rp71-1f1.4 ENSDARG00000092476 11 1.687 - - - 0.891 - 0.796 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
34. EFCAB6 ENSDARG00000020735 34 1.612 - 0.816 - - - 0.796 - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
35. spo11 ENSDARG00000013837 7 1.61 - - 0.774 - - - 0.836 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
36. zgc:153846 ENSDARG00000040738 1 1.6 - - - - - 0.764 0.836 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
37. C24H8orf34 C24H8orf34 1 1.6 - - - - - 0.764 0.836 - -
38. DIP2B DIP2B 18 1.6 - - - - - 0.764 0.836 - -
39. matn1 ENSDARG00000030215 11 1.595 - 0.889 - - - - - - 0.706 matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
40. si:dkey-253d23.9 ENSDARG00000074820 24 1.582 - - - - 0.818 0.764 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
41. nek1 ENSDARG00000022350 158 1.578 - 0.802 - - - 0.776 - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
42. fgf20a ENSDARG00000007356, ENSDARG00000114219 25 1.555 - 0.704 - - 0.851 - - - - fibroblast growth factor 20a [Source:ZFIN;Acc:ZDB-GENE-060110-1]
43. nitr3a_1 ENSDARG00000110676 44 1.541 - - - - 0.777 0.764 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
44. syngr3a ENSDARG00000014871 405 1.526 - 0.806 - - - 0.720 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
45. ZNF512B ENSDARG00000071055 7 1.511 - - 0.740 - - - - 0.771 - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
46. gpr158 gpr158 52 1.509 - - - 0.773 - 0.736 - - -
47. AL935272.2 AL935272.2 37 1.508 - - - 0.716 - 0.792 - - -
48. st3gal2 ENSDARG00000112898 370 1.505 - 0.742 - - - 0.763 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
49. RBM20 74 1.503 - - - 0.739 - 0.764 - - - RNA binding motif protein 20, transcript variant X1
50. nes ENSDARG00000088805 2710 1.501 - 0.770 - - 0.731 - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
51. dbx2 2971 1.49 - 0.781 - - - 0.709 - - - developing brain homeobox 2
52. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.485 - 0.783 - - - 0.702 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
53. si:ch211-93g21.1 ENSDARG00000093602 5 1.485 - - - - - 0.764 - 0.721 - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
54. six7 ENSDARG00000070107 140 1.473 - - 0.709 - - 0.764 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
55. lgi2a ENSDARG00000111069 965 1.46 - 0.743 - - - 0.717 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
56. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.446 - 0.704 - - - 0.742 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
57. gsx1 ENSDARG00000035735 1243 1.417 - - - - 0.700 0.717 - - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
58. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.415 - 0.713 - - - 0.702 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
59. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - 1.000 - - - - - - -
60. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
61. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
62. cdh10 cdh10 38 1 - 1.000 - - - - - - -
63. cdk20 ENSDARG00000003867 27 1 - 1.000 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
64. si:dkeyp-79c2.1 42 1 - 1.000 - - - - - - - si:dkeyp-79c2.1, transcript variant X2
65. si:dkey-106c17.1 si:dkey-106c17.1 26 1 - 1.000 - - - - - - -
66. fancg ENSDARG00000024967, ENSDARG00000113462 82 1 - - - - - - 1.000 - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
67. BX004785.5 BX004785.5 35 1 - - - - - - 1.000 - -
68. gucy1b3 92 1 - 1.000 - - - - - - - guanylate cyclase 1, soluble, beta 3
69. CACNA2D1 ENSDARG00000073752 6 1 - 1.000 - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
70. morn4 ENSDARG00000039062 145 1 - - - - - - 1.000 - - MORN repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-7]
71. pdia2 ENSDARG00000018263 74 1 - 1.000 - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
72. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
73. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
74. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
75. arl11l arl11l 31 1 - 1.000 - - - - - - -
76. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
77. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
78. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
79. si:ch211-195h23.4 ENSDARG00000093337 1 1 - 1.000 - - - - - - - si:ch211-195h23.4 [Source:ZFIN;Acc:ZDB-GENE-070912-175]
80. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
81. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
82. AGO3 AGO3 12 1 - 1.000 - - - - - - -
83. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
84. hcst ENSDARG00000092074 172 1 - 1.000 - - - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
85. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
86. tekt1 ENSDARG00000101331 27 1 - 1.000 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
87. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
88. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
89. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
90. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
91. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
92. PLCXD1_3 PLCXD1_3 35 1 - 1.000 - - - - - - -
93. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1 - 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
94. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
95. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
96. krt15 ENSDARG00000036840, ENSDARG00000111896 580 1 - 1.000 - - - - - - - keratin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2931]
97. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
98. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - 1.000 - - - - - - -
99. SRCIN1_1 SRCIN1_1 11 1 - 1.000 - - - - - - -
100. CR388095.2 ENSDARG00000117604 76 1 - 1.000 - - - - - - -

There are 1238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA