Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkey-19e4.5

Gene Name Gene ID Reads Annotation
si:dkey-19e4.5 ENSDARG00000089886 2562 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]










Genes with expression patterns similar to si:dkey-19e4.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-19e4.5 ENSDARG00000089886 2562 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
2. mier1a ENSDARG00000041072 1690 2.694 - - - - 0.966 - - 0.874 0.854 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
3. ncalda ENSDARG00000070688 5069 2.622 - - 0.944 - - - 0.851 - 0.827 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
4. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 2.568 - - 0.963 - - - 0.778 - 0.827 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
5. prr12a ENSDARG00000074229 1668 2.549 - - 0.968 - - 0.733 - - 0.848 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
6. carm1 ENSDARG00000018698 5599 2.516 - - 0.954 - - - 0.718 - 0.844 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
7. gnao1a ENSDARG00000016676 8184 2.511 - - - - 0.982 - 0.708 - 0.821 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
8. cdan1 ENSDARG00000042261 658 2.51 - - - - 0.985 - - 0.786 0.739 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
9. kdm1a ENSDARG00000060679 6152 2.508 - 0.805 - - - - 0.734 0.969 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
10. dpysl3 ENSDARG00000002587 4381 2.507 - - - - 0.959 0.812 - - 0.736 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
11. nup98 ENSDARG00000074955 3998 2.49 - 0.771 - - 0.976 - - 0.743 - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
12. srsf6b ENSDARG00000016783 9926 2.479 - - - 0.732 - - - 0.831 0.916 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
13. cspg5a ENSDARG00000069981 1699 2.474 - - - - - 0.779 - 0.835 0.860 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
14. cldn5a ENSDARG00000043716 3865 2.461 - - 0.865 - - - 0.741 0.855 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
15. aqr ENSDARG00000016775 1581 2.459 - - 0.966 - - - 0.728 - 0.765 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
16. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.453 - - - - - 0.792 - 0.875 0.786 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
17. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.443 - - - - 0.926 0.810 0.707 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
18. tcea1 ENSDARG00000003531 2912 2.442 - 0.740 - - 0.944 - - 0.758 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
19. bri3bp ENSDARG00000010108 6295 2.433 - - 0.892 - - 0.807 - - 0.734 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
20. znf292b ENSDARG00000043973 3791 2.427 - - 0.934 - - 0.777 - - 0.716 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
21. syncripl ENSDARG00000026723 3889 2.424 - - 0.815 - - - 0.710 - 0.899 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
22. plcg1 ENSDARG00000038442 5324 2.401 - - - - - 0.728 - 0.832 0.841 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
23. rqcd1 2301 2.393 - - 0.956 - - 0.718 0.719 - - RCD1 required for cell differentiation1 homolog (S. pombe)
24. CCDC106 CCDC106 1908 2.387 - - - - - - 0.775 0.819 0.793
25. nova2 ENSDARG00000017673 7685 2.385 - - - - 0.766 0.785 - - 0.834 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
26. lmnb2 ENSDARG00000101624 11304 2.38 - - - 0.733 0.877 - - 0.770 - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
27. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.365 0.781 - - - - - 0.719 - 0.865 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
28. IM:7163548 IM:7163548 6540 2.36 - - - - - 0.773 0.864 - 0.723
29. whsc1l1 8544 2.35 0.798 - - - - 0.701 0.851 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
30. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.349 - - 0.840 - - 0.731 - 0.778 - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
31. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.345 - - - - - 0.789 0.723 0.833 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
32. MZT1 ENSDARG00000096668 2514 2.337 - - - - - 0.785 0.787 - 0.765 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
33. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.336 - - - - - 0.779 0.784 - 0.773 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
34. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.309 - - - - - 0.730 0.707 - 0.872 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
35. TTYH3 TTYH3 1841 2.305 0.730 - - - - - 0.764 0.811 -
36. sarnp ENSDARG00000059357 4768 2.275 - - - - - 0.708 0.712 - 0.855 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
37. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.266 - - - - - 0.744 0.711 - 0.811 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
38. FP016176.1 FP016176.1 7030 2.263 - - - - - 0.732 0.817 - 0.714
39. hmgb3a ENSDARG00000056725 15668 2.249 - - - - - 0.792 0.748 - 0.709 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
40. arnt2 ENSDARG00000103697 5731 2.244 - - - - - 0.789 0.712 - 0.743 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
41. AGO1 ENSDARG00000092644 4521 2.226 - - - - - 0.772 0.735 0.719 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
42. khsrp ENSDARG00000026489 15738 2.226 - - - - - 0.728 0.735 - 0.763 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
43. TNRC6B ENSDARG00000074161 2464 2.22 - 0.747 - - - - 0.716 - 0.757 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
44. ephb4a ENSDARG00000100725 1749 2.161 - 0.754 - - - - 0.701 0.706 - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
45. ddx49 ENSDARG00000012899 1604 1.916 - - 0.944 - 0.972 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
46. COLGALT1 ENSDARG00000073974 5069 1.864 - - 0.892 - 0.972 - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
47. fibpa ENSDARG00000016058 2148 1.848 - - 0.878 - 0.970 - - - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
48. pcdh18a ENSDARG00000089805 1096 1.829 - - - - 0.988 - - - 0.841 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
49. sf3a3 ENSDARG00000100114 4511 1.828 - - 0.937 - - - - 0.891 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
50. dlb ENSDARG00000004232 5120 1.808 - - 0.936 - - - - 0.872 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
51. tmed4 ENSDARG00000024954 3476 1.805 - - 0.953 - - - - 0.852 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
52. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.802 - - 0.963 - - - - 0.839 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
53. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.801 - - 0.954 - - - - 0.847 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
54. utp3 ENSDARG00000056720 922 1.8 - - - - 0.983 - - 0.817 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
55. ZNF576 ZNF576 1447 1.8 - - 0.968 - - - - 0.832 -
56. emc3 ENSDARG00000020607 3406 1.796 - - 0.960 - - - - - 0.836 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
57. bag6 ENSDARG00000075892 3782 1.788 - - 0.951 - - - - - 0.837 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
58. znf207a ENSDARG00000015538 2630 1.785 - - 0.967 - - - - - 0.818 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
59. KIF1A KIF1A 1686 1.779 - - - - 0.971 - - - 0.808
60. AL844567.1 AL844567.1 1605 1.778 - - 0.970 - - 0.808 - - -
61. ints8 ENSDARG00000057986 1063 1.778 - - 0.974 - - - - - 0.804 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
62. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.775 - - 0.967 - - - - 0.808 - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
63. arpp19b ENSDARG00000039880 4823 1.772 - - 0.923 - 0.849 - - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
64. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.772 - - 0.934 - - - - 0.838 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
65. sh3bp5lb 1090 1.765 - - - - 0.983 0.782 - - - SH3-binding domain protein 5-like, b
66. ncaph2 ENSDARG00000033757 1042 1.759 - - - - 0.985 - - 0.774 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
67. smurf2 ENSDARG00000038067 2057 1.759 - - - - 0.978 - - 0.781 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
68. fam135a ENSDARG00000059843 2352 1.756 - 0.789 0.967 - - - - - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
69. ppm1da ENSDARG00000009273 7713 1.751 - - 0.895 - - - - - 0.856 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
70. eya3 ENSDARG00000036100 1965 1.75 - - - - 0.961 - - - 0.789 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
71. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.749 - - - - 0.976 - 0.773 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
72. tdg tdg 3269 1.747 - - - - 0.951 - 0.796 - -
73. ranbp9 ENSDARG00000061048 2687 1.746 - - - - 0.963 - - - 0.783 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
74. brd3a ENSDARG00000006527 1636 1.745 - - - - - - 0.949 - 0.796 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
75. PRRG1 ENSDARG00000043283 2779 1.743 - - - - 0.959 - - 0.784 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
76. nf1b ENSDARG00000004184 548 1.743 - - 0.972 - - - - 0.771 - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
77. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.743 - - - - 0.940 - 0.803 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
78. mcrs1 ENSDARG00000020840 3232 1.742 - - - - 0.957 - - - 0.785 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
79. hoxc4a ENSDARG00000070338 1382 1.741 - - - - 0.980 0.761 - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
80. psd3l ENSDARG00000104820 1201 1.74 - 0.773 0.967 - - - - - - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
81. prep ENSDARG00000057151 3016 1.74 - - 0.973 - - - 0.767 - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
82. tnks tnks 1695 1.738 - - - - 0.966 - - 0.772 -
83. CCDC88C ENSDARG00000053713 1026 1.737 - - 0.962 - - - - - 0.775 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
84. myo1b ENSDARG00000024694 1761 1.734 - - 0.966 - - - - - 0.768 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
85. polr2j ENSDARG00000035146 1493 1.734 - - 0.962 - - - 0.772 - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
86. top1l ENSDARG00000070545 40529 1.731 - - 0.840 - - - 0.891 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
87. atp1a3a ENSDARG00000018259 5393 1.729 - - 0.922 - - 0.807 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
88. ercc2 ENSDARG00000021985 678 1.729 0.761 - 0.968 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
89. her4.3 ENSDARG00000070770 613 1.729 - - - - 0.988 0.741 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
90. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.728 - - 0.931 - - - - - 0.797 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
91. hnrnpul1 ENSDARG00000040564 6550 1.727 - - 0.963 - - - - 0.764 - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
92. wfikkn2a ENSDARG00000013460 859 1.725 - - - - 0.987 0.738 - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
93. zmiz1a ENSDARG00000074502 3920 1.724 - - 0.943 - - 0.781 - - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
94. zgc:111974 zgc:111974 1386 1.722 - - - - 0.977 - - 0.745 -
95. hgs ENSDARG00000020960 3574 1.719 - - - - 0.955 - - - 0.764 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
96. samm50l ENSDARG00000039681 2465 1.712 - - - - 0.954 - 0.758 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
97. smg7 ENSDARG00000060767 2759 1.711 - - - - 0.980 - 0.731 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
98. efnb3b ENSDARG00000042277 5823 1.71 - - 0.948 - - 0.762 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
99. phf16 phf16 1116 1.71 - - - - 0.975 - 0.735 - -
100. gfap ENSDARG00000025301 5584 1.709 - - 0.962 - - 0.747 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]

There are 2312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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