Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-199m13.2

Gene Name Gene ID Reads Annotation
si:dkey-199m13.2 si:dkey-199m13.2 31










Genes with expression patterns similar to si:dkey-199m13.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-199m13.2 si:dkey-199m13.2 31 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. gsdf ENSDARG00000075301 6 2 - 1.000 - - - - 1.000 - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
3. slc44a1a ENSDARG00000015946 10 2 - 1.000 - - - - 1.000 - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
4. SLC44A1 SLC44A1 43 1.955 - 0.955 - - - - 1.000 - -
5. si:dkeyp-80c12.4 ENSDARG00000036479 7 1.862 - 0.947 - - 0.915 - - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
6. si:dkey-241l7.10 si:dkey-241l7.10 38 1.858 - - - - - - 1.000 - 0.858
7. exoc4 ENSDARG00000004336 32 1.851 - - 0.948 - 0.903 - - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
8. rnf145b ENSDARG00000032373 601 1.783 - 0.843 0.940 - - - - - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
9. eva1bb ENSDARG00000100698 223 1.75 - 0.986 - - 0.764 - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
10. crmp1 ENSDARG00000056742 332 1.737 - 0.931 - - - - 0.806 - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
11. sptssb ENSDARG00000091658 42 1.721 - 0.807 - - 0.914 - - - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
12. CABZ01069519.1 CABZ01069519.1 64 1.7 - 0.904 - - - - 0.796 - -
13. TTC9 ENSDARG00000074363 196 1.669 - - 0.943 - 0.726 - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
14. RASIP1 ENSDARG00000074829 113 1.613 - 0.772 0.841 - - - - - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
15. AL929092.1 ENSDARG00000092217 50 1.56 - 0.731 - - 0.829 - - - -
16. aak1 aak1 81 1.546 - - 0.831 - - - 0.715 - -
17. foxp3a ENSDARG00000055750 15 1.522 - - - - - - 0.779 - 0.743 forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
18. MYO5C ENSDARG00000104235 1285 1.504 - - 0.748 - - - 0.756 - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
19. rabl2 ENSDARG00000063321, ENSDARG00000109811, ENSDARG00000112447 301 1.487 - 0.723 0.764 - - - - - - RAB, member of RAS oncogene family-like 2 [Source:ZFIN;Acc:ZDB-GENE-060503-464]
20. zgc:110249 ENSDARG00000035221 68 1.472 - 0.744 - - 0.728 - - - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
21. kctd16b ENSDARG00000020102 83 1.445 - 0.745 - - 0.700 - - - - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
22. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
23. COL9A3 ENSDARG00000037845 1 1 - 1.000 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
24. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
25. tbc1d22b ENSDARG00000026988 18 1 - 1.000 - - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
26. card9 ENSDARG00000067672 33 1 - 1.000 - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
27. pik3r5 ENSDARG00000102762 56 1 - 1.000 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
28. MFAP4_6 MFAP4_6 162 1 - 1.000 - - - - - - -
29. chd5 ENSDARG00000105083 132 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
30. BX511270.1 BX511270.1 25 1 - - - - - - 1.000 - -
31. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 1 - - - - - - 1.000 - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
32. knca7 17 1 - - - - - - 1.000 - - potassium voltage-gated channel, shaker-related subfamily, member 7
33. zgc:92590 ENSDARG00000040282 13 1 - - - - - - 1.000 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
34. CR356223.6 CR356223.6 4 1 - 1.000 - - - - - - -
35. si:ch211-284e13.11 ENSDARG00000091997 3 1 - 1.000 - - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
36. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - 1.000 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
37. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
38. sox11a ENSDARG00000077811 25 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
39. hepacam 73 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule, transcript variant X2
40. scpp8 ENSDARG00000093124 54 1 - 1.000 - - - - - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
41. NEK11 ENSDARG00000087564 40 1 - - - - - - 1.000 - - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
42. radil ENSDARG00000079779 14 1 - 1.000 - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
43. ABCC3 ENSDARG00000096662 15 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
44. SPTBN4 ENSDARG00000092624 6 1 - 1.000 - - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
45. COX5B ENSDARG00000015978 70 1 - 1.000 - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
46. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - 1.000 - - - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
47. slc26a6 ENSDARG00000055835, ENSDARG00000097292 66 1 - - - - - - 1.000 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
48. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - 1.000 - - - - - - -
49. KCNN2 ENSDARG00000014939 25 1 - - - - - - 1.000 - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
50. irx7 ENSDARG00000002601 72 1 - - - - - - 1.000 - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
51. gng2_1 ENSDARG00000056831 113 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
52. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
53. FNDC3A ENSDARG00000105503 11 1 - - - - - - 1.000 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
54. zgc:165525 zgc:165525 207 1 - - - - - - 1.000 - -
55. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 - 1.000 - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
56. hamp2 hamp2 67 1 - 1.000 - - - - - - -
57. CABZ01075242.1 ENSDARG00000114227 9 1 - - - - - - 1.000 - -
58. si:dkey-42p8.3 1117 1 - 1.000 - - - - - - - si:dkey-42p8.3, transcript variant X1
59. si:dkey-69c19.1 si:dkey-69c19.1 37 1 - 1.000 - - - - - - -
60. FAM83F FAM83F 8 1 - - - - - - 1.000 - -
61. CU459152.1 CU459152.1 407 1 - - - - - - 1.000 - -
62. VSTM2A ENSDARG00000021909 0 1 - - - - - - 1.000 - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
63. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - 1.000 - - - - - - -
64. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - - - 1.000 - -
65. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 1 - - - - - - 1.000 - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
66. BX322612.1 BX322612.1 236 1 - - - - - - 1.000 - -
67. TPO 2 1 - 1.000 - - - - - - - thyroid peroxidase
68. syngr2b_1 ENSDARG00000104470 24 1 - - - - - - 1.000 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
69. CABZ01030033.1 ENSDARG00000117613 3 1 - 1.000 - - - - - - -
70. si:ch73-138e16.2 ENSDARG00000104894 1 1 - - - - - - 1.000 - - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
71. zgc:173652 22 1 - 1.000 - - - - - - - zgc:173652
72. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 - 1.000 - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
73. il12a ENSDARG00000038878 3 1 - - - - - - 1.000 - - interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
74. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
75. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - - 1.000 - -
76. si:ch211-57m13.10 ENSDARG00000095902 1 1 - - - - - - 1.000 - - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]
77. PAMR1 ENSDARG00000093480 40 1 - - - - - - 1.000 - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
78. sema6e ENSDARG00000000189 35 1 - 1.000 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
79. rx1 ENSDARG00000071684 247 1 - - - - - - 1.000 - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
80. poln ENSDARG00000103961, ENSDARG00000113911 57 1 - - - - - - 1.000 - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
81. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
82. CCHCR1_1 CCHCR1_1 1 1 - - - - - - 1.000 - -
83. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - - 1.000 - -
84. slc5a5 ENSDARG00000005392 6 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
85. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 1 - 1.000 - - - - - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
86. nisch ENSDARG00000043077 11 1 - 1.000 - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
87. ccr12.3 ccr12.3 79 1 - 1.000 - - - - - - -
88. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - - 1.000 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
89. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
90. KLHL29_1 KLHL29_1 158 1 - 1.000 - - - - - - -
91. figf 48 1 - - - - - - 1.000 - - c-fos induced growth factor, transcript variant X2
92. CABZ01053592.1 ENSDARG00000117388 6 1 - 1.000 - - - - - - -
93. wt1b ENSDARG00000007990 39 1 - 1.000 - - - - - - - wilms tumor 1b [Source:ZFIN;Acc:ZDB-GENE-050420-319]
94. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - 1.000 - - - - - - -
95. man2a1 ENSDARG00000102200 12 1 - 1.000 - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
96. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - 1.000 - - - - - - -
97. fkbp1ab ENSDARG00000033567, ENSDARG00000110465, ENSDARG00000116437 83 1 - - - - - - 1.000 - - FK506 binding protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-040927-9]
98. edn3b ENSDARG00000086669 8 1 - 1.000 - - - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
99. krt1-c5 ENSDARG00000026979 325 1 - 1.000 - - - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
100. KCNJ3 KCNJ3 24 1 - 1.000 - - - - - - -

There are 779 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA