Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-193p11.2

Gene Name Gene ID Reads Annotation
si:dkey-193p11.2 ENSDARG00000096712 3500 si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]










Genes with expression patterns similar to si:dkey-193p11.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-193p11.2 ENSDARG00000096712 3500 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
2. FAM110D FAM110D 3632 3.35 - 0.890 0.814 - - 0.742 0.904 - -
3. tmem181 ENSDARG00000045910 2288 2.696 0.793 0.974 - - - - 0.929 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
4. frem2a ENSDARG00000076856 11022 2.595 - 0.844 0.902 - 0.849 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
5. BX511245.1 ENSDARG00000096871 7523 2.556 - 0.943 0.763 - - - 0.850 - -
6. im:7150988 ENSDARG00000109310 28520 2.282 0.756 - - - 0.730 - - 0.796 - im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
7. atl3 ENSDARG00000004270 2806 1.906 - 0.986 - - - - 0.920 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
8. idh3g ENSDARG00000023648 4877 1.894 - - - - - - 0.926 - 0.968 isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
9. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.888 - 0.957 - - - - 0.931 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
10. abcb7 ENSDARG00000062795 1404 1.885 - 0.962 - - - - 0.923 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
11. glyr1 ENSDARG00000099213 6906 1.858 - 0.944 - - - - 0.914 - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
12. lyrm2 ENSDARG00000033138 5597 1.857 - - - - - - 0.887 - 0.970 LYR motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-040914-27]
13. uqcrfs1 ENSDARG00000007745 4654 1.842 - 0.969 - - - - 0.873 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
14. eppk1 ENSDARG00000096359 4315 1.827 0.901 - - - - - - - 0.926 epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
15. mrpl12 ENSDARG00000038768 5539 1.819 - - - - - - 0.844 - 0.975 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
16. calm2b 3890 1.814 - 0.964 - - - - 0.850 - - calmodulin 2b, (phosphorylase kinase, delta)
17. hoxc3a ENSDARG00000070339 3379 1.804 - 0.958 - - - - 0.846 - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
18. myo9al1 myo9al1 1194 1.792 - 0.970 - - - - - 0.822 -
19. myo1c myo1c 4978 1.77 - 0.894 - - - - 0.876 - -
20. si:dkey-87o1.2 ENSDARG00000095796 6602 1.766 - 0.901 - - - - 0.865 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
21. COL13A1 1565 1.758 - - - - 0.859 - 0.899 - - collagen, type XIII, alpha 1, transcript variant X1
22. gltscr2 gltscr2 5763 1.755 - 0.939 - - - - 0.816 - -
23. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 1.75 - 0.965 0.785 - - - - - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
24. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.725 - - - - - - 0.915 0.810 - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
25. NDUFA3 ENSDARG00000041400 7939 1.712 - 0.936 - - - - 0.776 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
26. ifrd1 ENSDARG00000068708 2858 1.704 0.767 - - - - - 0.937 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
27. creb3l1 ENSDARG00000015793 1988 1.702 - - - - - - 0.921 0.781 - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
28. fstl1a ENSDARG00000015559 1687 1.693 - - 0.815 - - - - 0.878 - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
29. tspan7 ENSDARG00000015759 13891 1.691 - 0.888 - - - - 0.803 - - tetraspanin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5435]
30. PVRL4 1691 1.689 - - 0.752 - - - 0.937 - - poliovirus receptor-related 4
31. serpinh1b ENSDARG00000019949 11693 1.688 - 0.955 - - - - - 0.733 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
32. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 1.685 - 0.969 0.716 - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
33. ZFYVE1 ENSDARG00000078652 631 1.685 - - - - - - 0.894 0.791 - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
34. zgc:162608 ENSDARG00000069375 2881 1.681 0.705 - - - - - - - 0.976 zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
35. gstal gstal 1865 1.681 - - 0.719 - - - 0.962 - -
36. zc3h18 ENSDARG00000062506 1676 1.68 - - - - - - 0.908 0.772 - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
37. NDNF ENSDARG00000062936 7287 1.675 - - - - 0.702 - - - 0.973 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
38. snrnp27 ENSDARG00000035625 9080 1.675 - - 0.701 - - - - - 0.974 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
39. cux1b ENSDARG00000043134 641 1.668 - - - - - - 0.907 0.761 - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
40. tspo ENSDARG00000026655 12517 1.665 0.848 - - - - - 0.817 - - translocator protein [Source:ZFIN;Acc:ZDB-GENE-041010-125]
41. b3gnt2b ENSDARG00000091902 4125 1.662 - 0.939 0.723 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
42. s100u ENSDARG00000071014 4754 1.661 0.704 0.957 - - - - - - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
43. and3 ENSDARG00000056873 22650 1.656 - - 0.889 - 0.767 - - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
44. si:ch211-243g18.2 ENSDARG00000044261 4483 1.653 - - - - 0.742 - - 0.911 - si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
45. PSD PSD 367 1.641 0.742 - - - - - 0.899 - -
46. sdpra sdpra 4594 1.641 0.710 - - - - - 0.931 - -
47. krt8 ENSDARG00000058358, ENSDARG00000109279 85624 1.635 - 0.893 0.742 - - - - - - keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
48. serping1 ENSDARG00000058053 1344 1.622 0.746 - - - - - 0.876 - - serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1262]
49. ogn 5002 1.62 - - 0.856 - 0.764 - - - - osteoglycin
50. zdhhc5a ENSDARG00000016263 625 1.619 - - - - - 0.710 0.909 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
51. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 1.615 - - - - - - 0.899 0.716 - dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
52. and2 ENSDARG00000079302 20939 1.607 - - 0.778 - 0.829 - - - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
53. efemp2a ENSDARG00000094324 39261 1.606 - - - - 0.736 - - - 0.870 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
54. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.606 - - - - - 0.718 0.888 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
55. cebpa ENSDARG00000036074 751 1.604 0.742 - - - - - - 0.862 - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
56. rasd1 ENSDARG00000019274 1898 1.595 0.772 - - - - 0.823 - - - RAS, dexamethasone-induced 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1473]
57. sar1b ENSDARG00000103403 1699 1.594 - - 0.737 - - - - 0.857 - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
58. hsd11b3a hsd11b3a 1388 1.592 - - - - - - 0.863 0.729 -
59. lmnb2 ENSDARG00000101624 11304 1.587 - 0.873 - - - - 0.714 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
60. si:dkey-235d18.5 ENSDARG00000039652 667 1.58 - - - - - 0.713 0.867 - - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
61. MAL 9331 1.571 0.858 - - - - - - 0.713 - mal, T-cell differentiation protein
62. jupa ENSDARG00000070787, ENSDARG00000112777 20968 1.551 0.799 - - - - - 0.752 - - junction plakoglobin a [Source:ZFIN;Acc:ZDB-GENE-991207-22]
63. cd9b ENSDARG00000016691 15573 1.55 - - - - - - 0.761 0.789 - CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
64. tram1 ENSDARG00000019137, ENSDARG00000109629 8309 1.55 - 0.829 - - - - 0.721 - - translocation associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-021011-1]
65. TMEM54 TMEM54 1882 1.542 - - - - - 0.756 - 0.786 -
66. mrpl17 ENSDARG00000075677 1840 1.537 - 0.830 - - - 0.707 - - - mitochondrial ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-040912-133]
67. rbp4l ENSDARG00000044684 3292 1.535 0.800 0.735 - - - - - - - retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
68. oclnb ENSDARG00000003091 3729 1.534 - - - - - 0.798 0.736 - - occludin b [Source:ZFIN;Acc:ZDB-GENE-041212-43]
69. unc5b ENSDARG00000033327 3432 1.533 - - - - - 0.797 0.736 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
70. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.525 - - 0.736 - - - - 0.789 - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
71. ptplb ptplb 6135 1.524 0.824 - - - - 0.700 - - -
72. FBLN1 ENSDARG00000103311 877 1.521 - - 0.707 - - - - 0.814 - fibulin 1 [Source:NCBI gene;Acc:30240]
73. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.521 - - - - 0.764 - 0.757 - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
74. lhfp 700 1.502 - - 0.766 - 0.736 - - - - lipoma HMGIC fusion partner
75. si:ch211-232i5.3 ENSDARG00000086874 1256 1.501 0.712 - - - - - - 0.789 - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
76. rnf114 ENSDARG00000009886 725 1.496 - - 0.734 - - - - 0.762 - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
77. bmp4 ENSDARG00000019995 2038 1.496 0.708 - 0.788 - - - - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
78. sepw2b 3942 1.493 - - 0.726 - - - 0.767 - - selenoprotein W, 2b
79. hoxc12a ENSDARG00000070352 7409 1.485 - - 0.715 - 0.770 - - - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
80. kdelr2a ENSDARG00000005254 13871 1.473 - - - - - - 0.767 0.706 - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
81. cdx4 ENSDARG00000036292 1225 1.461 - - - 0.730 0.731 - - - - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
82. mid1ip1a ENSDARG00000041051 5425 1.448 0.718 - - - - - 0.730 - - MID1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-990415-81]
83. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.437 - - 0.732 - 0.705 - - - - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
84. colgalt2 ENSDARG00000014670 1932 1.42 - - 0.718 - 0.702 - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
85. vps29 ENSDARG00000069521 5599 0.987 - 0.987 - - - - - - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
86. nup50 ENSDARG00000017454 4425 0.987 - - - - - - - - 0.987 nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
87. rdh10b ENSDARG00000012369 980 0.987 - 0.987 - - - - - - - retinol dehydrogenase 10b [Source:ZFIN;Acc:ZDB-GENE-030909-7]
88. tfe3a ENSDARG00000098903 1530 0.985 - 0.985 - - - - - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
89. tmed9 ENSDARG00000004261 10013 0.985 - - - - - - - - 0.985 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
90. fkbp11 ENSDARG00000037000, ENSDARG00000111059 2888 0.983 - 0.983 - - - - - - - FK506 binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-030616-357]
91. cylda ENSDARG00000060058 768 0.98 - 0.980 - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
92. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 0.98 - 0.980 - - - - - - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
93. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 0.979 - - - - - - - - 0.979 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
94. lemd3 ENSDARG00000015824 2868 0.979 - - - - - - - - 0.979 LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
95. ATP10B ENSDARG00000076230 989 0.977 - - - - - - - - 0.977 ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
96. rab5aa ENSDARG00000018602 8947 0.977 - 0.977 - - - - - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
97. tra2a ENSDARG00000007863 4449 0.976 - 0.976 - - - - - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
98. SHROOM2 SHROOM2 934 0.976 - - - - - - - - 0.976
99. kif3cb ENSDARG00000079500 935 0.976 - - - - - - - - 0.976 kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
100. snapin ENSDARG00000062382 1531 0.976 - - - - - - - - 0.976 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]

There are 1121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA