Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-193c22.1

Gene Name Gene ID Reads Annotation
si:dkey-193c22.1 ENSDARG00000093687 104 si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]










Genes with expression patterns similar to si:dkey-193c22.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-193c22.1 ENSDARG00000093687 104 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
2. GPR153 ENSDARG00000087601 48 2.859 0.967 - - - - - 1.000 0.892 - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
3. nrg2b ENSDARG00000086585 100 2.803 0.925 - - - - - 1.000 0.878 - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
4. BX470131.1 BX470131.1 86 2.786 0.958 1.000 - - - - 0.828 - -
5. SMARCA4 ENSDARG00000104339 48 2.771 - 1.000 - - - 0.771 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
6. pdzd4 175 2.72 - 1.000 - - - 0.806 0.914 - - PDZ domain containing 4, transcript variant X2
7. FAXC FAXC 102 2.68 0.958 1.000 - - - 0.722 - - -
8. grik5 ENSDARG00000101449, ENSDARG00000111384 75 2.64 0.958 0.865 - - - 0.817 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
9. evx2 ENSDARG00000059255 317 2.587 0.762 - - - - 0.836 0.989 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
10. mb21d2a mb21d2a 421 2.504 0.778 0.835 - - - - 0.891 - -
11. tmcc2 ENSDARG00000046007 148 2.434 0.817 - - - - 0.771 0.846 - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
12. penka ENSDARG00000004869 161 2.414 0.729 - - - - 0.793 0.892 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
13. elavl4 ENSDARG00000045639 998 2.402 - 0.794 - - - 0.822 0.786 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
14. scn1bb ENSDARG00000105003 239 2.392 0.814 - - - - 0.737 0.841 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
15. scn8aa ENSDARG00000005775 792 2.286 0.727 - - - - 0.711 0.848 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
16. gsx1 ENSDARG00000035735 1243 2.28 0.736 - - - - 0.750 0.794 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
17. rac3a ENSDARG00000090062 394 2.273 0.708 - - - - 0.793 0.772 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
18. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 2.232 0.769 0.728 - - - - 0.735 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
19. scn2b ENSDARG00000101713 796 2.174 0.716 - - - - 0.732 0.726 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
20. cldnd ENSDARG00000006580 17 2 - 1.000 - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
21. cdk5r1a ENSDARG00000037916 46 2 - 1.000 - - - - 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
22. rassf4 ENSDARG00000012460 43 2 - 1.000 - - - - 1.000 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
23. plscr3a ENSDARG00000093078 7 2 - 1.000 - - - - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
24. SNORA31 SNORA31 23 1.958 0.958 1.000 - - - - - - -
25. ZNF337_11 ZNF337_11 11 1.958 0.958 1.000 - - - - - - -
26. nosip ENSDARG00000037958, ENSDARG00000112335 59 1.958 0.958 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
27. xkr8.1 ENSDARG00000004498 18 1.958 0.958 - - - - - 1.000 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
28. CABZ01084273.1 CABZ01084273.1 16 1.958 0.958 - - - - - 1.000 - -
29. si:dkey-266f7.10 ENSDARG00000086613 7 1.958 0.958 - - - - - 1.000 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
30. si:dkey-199m13.8 si:dkey-199m13.8 61 1.958 0.958 1.000 - - - - - - -
31. adgra1a ENSDARG00000054177 19 1.943 0.943 - - - - - 1.000 - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
32. erap2 ENSDARG00000098618 16 1.929 - 1.000 - - - - 0.929 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
33. styxl1 ENSDARG00000026338 29 1.897 - - - - - - 1.000 0.897 - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
34. adcyap1a ENSDARG00000004015 67 1.896 0.896 - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
35. nebl ENSDARG00000021200 40 1.892 - - - - - - 1.000 0.892 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
36. slco4a1 ENSDARG00000075948 74 1.89 - - - - - - 1.000 0.890 - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
37. fez1 ENSDARG00000023174 701 1.889 - 1.000 - - - - 0.889 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
38. LMTK3 LMTK3 222 1.884 - 1.000 - - - - 0.884 - -
39. cacng2a ENSDARG00000032565 99 1.882 - 1.000 - - - - 0.882 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
40. pigf ENSDARG00000032780 7 1.88 - 0.880 - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
41. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.873 - 1.000 - - - - 0.873 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
42. CR524483.1 ENSDARG00000109248 86 1.857 0.958 - - - - - 0.899 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
43. slc1a1 ENSDARG00000020212 104 1.854 0.854 - - - - - 1.000 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
44. zgc:153615 ENSDARG00000038981 105 1.846 - 1.000 - - - - 0.846 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
45. trpc1 ENSDARG00000061203 62 1.845 0.958 - - - - - - 0.887 - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
46. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.843 - 1.000 - - - - 0.843 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
47. pcbp3 ENSDARG00000054378 74 1.842 - 1.000 - - - - 0.842 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
48. CABZ01041804.1 CABZ01041804.1 312 1.838 0.958 0.880 - - - - - - -
49. TENM2 ENSDARG00000037122 48 1.836 0.836 - - - - - 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
50. zic6 ENSDARG00000071496 402 1.832 1.000 - - - - 0.832 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
51. fbxl3b ENSDARG00000021882 58 1.828 0.828 - - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
52. arhgef9a ENSDARG00000061746 58 1.828 - 1.000 - - - - 0.828 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
53. Mar-04 Mar-04 21 1.824 0.824 - - - - - 1.000 - -
54. TMEM57 TMEM57 260 1.82 - 1.000 - - - - 0.820 - -
55. C21H5orf24 C21H5orf24 333 1.819 0.916 - - - - - 0.903 - -
56. kcnd1 ENSDARG00000074746 153 1.805 - - - - - 0.830 0.975 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
57. lhx5 ENSDARG00000057936 785 1.798 - 1.000 - - - - 0.798 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
58. GADD45G_1 GADD45G_1 236 1.79 - 1.000 - - - 0.790 - - -
59. syt4 ENSDARG00000036505 421 1.79 0.835 - - - - - 0.955 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
60. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.786 - - - - - 0.786 1.000 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
61. pcyt1ba ENSDARG00000058162 206 1.785 - 1.000 - - - 0.785 - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
62. ndrg4 ENSDARG00000103937 1234 1.783 0.911 - - - - - 0.872 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
63. hivep3a ENSDARG00000075928 17 1.778 0.778 - - - - - 1.000 - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
64. DOCK4 DOCK4 78 1.776 - 1.000 - - - - 0.776 - -
65. chrna6 ENSDARG00000055559 60 1.775 - 1.000 - - - 0.775 - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
66. lhfpl4a ENSDARG00000111810 206 1.772 - 0.875 - - - - 0.897 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
67. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.766 - - - - - 0.807 0.959 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
68. NPBWR2 NPBWR2 132 1.762 0.958 - - - - 0.804 - - -
69. mir124-6 64 1.762 0.762 - - - - - 1.000 - - microRNA 124-6
70. CABZ01065506.1 CABZ01065506.1 204 1.756 0.958 - - - - - 0.798 - -
71. PRR12 PRR12 38 1.755 - 1.000 - - - 0.755 - - -
72. rbfox3l rbfox3l 34 1.75 0.750 - - - - - 1.000 - -
73. gabrg2 ENSDARG00000053665 434 1.745 0.909 - - - - - 0.836 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
74. RAPGEF4 ENSDARG00000079872 82 1.744 - 1.000 - - - 0.744 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
75. tlx2 ENSDARG00000011273 870 1.74 - - - - - 0.866 0.874 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
76. CABZ01029822.1 ENSDARG00000086931 1654 1.74 0.893 - - - - - 0.847 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
77. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.74 0.826 - - - - - 0.914 - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
78. si:dkey-100n10.2 101 1.739 0.739 1.000 - - - - - - - si:dkey-100n10.2
79. scg2b ENSDARG00000038574 345 1.738 0.738 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
80. AP5Z1 ENSDARG00000078111 91 1.737 0.958 - - - - - - 0.779 - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
81. GPR22 GPR22 33 1.734 0.958 - - - - - 0.776 - -
82. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.734 0.967 - - - - 0.767 - - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
83. gpr61 ENSDARG00000055570 128 1.733 - 1.000 - - - 0.733 - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
84. SKOR2 SKOR2 1041 1.733 0.813 - - - - - 0.920 - -
85. bhlhe22 ENSDARG00000058039 1673 1.731 - 0.954 - - - - 0.777 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
86. gdf10b ENSDARG00000073891 116 1.731 0.958 - - - - - - - 0.773 growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
87. ROBO3_1 ROBO3_1 468 1.727 - 0.893 - - - - 0.834 - -
88. her8a ENSDARG00000016363 996 1.719 0.923 - - - - - 0.796 - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
89. CYP46A1 CYP46A1 16 1.717 - - - - - - 1.000 - 0.717
90. si:dkey-17e6.2 si:dkey-17e6.2 72 1.715 0.958 - - - - - 0.757 - -
91. shank2 ENSDARG00000062325 66 1.713 0.958 - - - - 0.755 - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
92. si:dkey-228i19.32 si:dkey-228i19.32 9 1.713 0.958 - - - - 0.755 - - -
93. sf3b3 ENSDARG00000103553 57 1.712 - - - - - 0.712 1.000 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
94. FGFBP3 FGFBP3 993 1.709 - - - - - 0.808 0.901 - -
95. dtnbp1b ENSDARG00000055206 64 1.705 - - - - - 0.752 0.953 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
96. cdh18 cdh18 64 1.703 - 1.000 - - - 0.703 - - -
97. prdm14 ENSDARG00000045371 106 1.702 - - - - - 0.702 1.000 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
98. nrxn2a ENSDARG00000061454 291 1.694 0.848 - - - - - 0.846 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
99. SAMD14 145 1.689 - - - - - 0.704 0.985 - - sterile alpha motif domain containing 14, transcript variant X3
100. htr3a ENSDARG00000089212 51 1.687 0.794 - - - - - - 0.893 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]

There are 1761 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA