Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-193b15.6

Gene Name Gene ID Reads Annotation
si:dkey-193b15.6 si:dkey-193b15.6 1340










Genes with expression patterns similar to si:dkey-193b15.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-193b15.6 si:dkey-193b15.6 1340 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. slc1a5 ENSDARG00000099186 7580 2.799 - 0.969 - - - - - 0.947 0.883 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
3. atp6v1f ENSDARG00000045543 3445 2.741 - - - - - - 0.842 0.923 0.976 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
4. CU915738.1 CU915738.1 3723 2.497 - - - - - 0.812 - 0.839 0.846
5. itm2bb ENSDARG00000041505 2734 2.349 - - - - - 0.862 0.707 0.780 - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
6. vps4b ENSDARG00000069175 1922 1.981 - 0.994 - - - - - 0.987 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
7. esrp1 ENSDARG00000011245 2097 1.975 - 0.991 - - - - - - 0.984 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
8. stxbp5b ENSDARG00000029234 760 1.969 - 0.982 - - - - - - 0.987 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
9. im:7136729 im:7136729 1625 1.966 - 0.985 - - - - - - 0.981
10. cenpl ENSDARG00000038802 696 1.954 - 0.985 - - - - - 0.969 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
11. scaf11 ENSDARG00000045885 3531 1.944 - - - - - - - 0.973 0.971 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
12. cpla2 cpla2 1031 1.942 - - - - - - - 0.955 0.987
13. rgs12b ENSDARG00000036774 5088 1.927 - 0.962 - - - - - 0.965 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
14. srebf2 ENSDARG00000063438 1982 1.92 - - - - - - - 0.982 0.938 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
15. mtpn ENSDARG00000104018 4264 1.897 - 0.984 - - - - - 0.913 - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
16. ptpn23a ENSDARG00000070124 1206 1.88 - - - - - 0.897 - - 0.983 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
17. lepre1 lepre1 5346 1.877 - - - - - - - 0.959 0.918
18. ensab ENSDARG00000061644 2436 1.875 - - - - - 0.896 - - 0.979 endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
19. sult1st4 ENSDARG00000003181 540 1.865 - 0.973 - - - 0.892 - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
20. arcn1b ENSDARG00000031214 4529 1.86 - 0.975 - - - 0.885 - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
21. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.86 - 0.993 - - - - 0.867 - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
22. ptbp3 ENSDARG00000043757 6760 1.854 - 0.970 - - - - - - 0.884 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
23. slit1a ENSDARG00000044954 3810 1.839 - - - - - - - 0.903 0.936 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
24. ovol1 1037 1.835 - 0.970 - - - 0.865 - - - ovo-like zinc finger 1, transcript variant X1
25. hnrnpk ENSDARG00000018914 8841 1.824 - 0.921 - - - - - - 0.903 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
26. si:ch211-191j22.3 ENSDARG00000095459 959 1.822 - - - - - 0.839 - - 0.983 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
27. gbgt1l4 ENSDARG00000068503 1009 1.821 0.841 - - - - - - - 0.980 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
28. capn2b ENSDARG00000055592 5431 1.818 - 0.984 - - - - - 0.834 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
29. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.814 - 0.948 - - - 0.866 - - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
30. arpc5a ENSDARG00000039142 5482 1.812 - - - - - 0.832 - 0.980 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
31. rnf128a ENSDARG00000016867 3146 1.8 - 0.954 - - - 0.846 - - - ring finger protein 128a [Source:ZFIN;Acc:ZDB-GENE-030131-1044]
32. pdxdc1 ENSDARG00000101886 1958 1.787 - - - - - 0.810 - 0.977 - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
33. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.765 - - - - - 0.776 - - 0.989 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
34. sra1 ENSDARG00000053619 2799 1.757 - - - - - 0.781 - - 0.976 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
35. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 1.757 - 0.980 - - - - 0.777 - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
36. casc5 1487 1.752 - - - - - 0.789 - 0.963 - cancer susceptibility candidate 5, transcript variant X3
37. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.751 0.817 - - - - - - - 0.934 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
38. SH3D21 ENSDARG00000099448 1726 1.746 - 0.978 - - - 0.768 - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
39. elovl6l ENSDARG00000038639 1184 1.744 - - - - - 0.775 - 0.969 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
40. rrbp1a ENSDARG00000013763 4723 1.743 - - - - - 0.895 - 0.848 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
41. vimp 4034 1.739 - 0.947 - - - 0.792 - - - VCP-interacting membrane selenoprotein
42. flot2a ENSDARG00000004830 5276 1.734 - 0.926 - - - - - 0.808 - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
43. bcar1 ENSDARG00000056525 6563 1.733 - - - - - 0.820 - 0.913 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
44. tom1 ENSDARG00000104581 1457 1.726 - - - - - 0.770 - 0.956 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
45. nudt17 ENSDARG00000008014 479 1.724 0.762 - - - - - - 0.962 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
46. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 1.718 - - - - - 0.739 - 0.979 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
47. padi2 ENSDARG00000044167 6765 1.718 - 0.951 - - - - - 0.767 - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
48. dhrs9 ENSDARG00000019260 250 1.715 - 0.984 - - - - 0.731 - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
49. C17H15orf57 C17H15orf57 1366 1.714 - - - - - 0.730 - 0.984 -
50. pikfyve ENSDARG00000056112 1583 1.714 - 0.961 - - - - 0.753 - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
51. tpd52l2b ENSDARG00000013655 9460 1.711 - 0.808 - - - - - - 0.903 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
52. fosl2 ENSDARG00000040623 2041 1.706 - 0.983 - - - - 0.723 - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
53. zgc:100918 ENSDARG00000087243 5451 1.703 - - - - - 0.810 - - 0.893 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
54. rnf10 ENSDARG00000079687 6768 1.702 - 0.881 - - - - - 0.821 - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
55. tango2 ENSDARG00000056550 1130 1.701 - 0.977 - - - - 0.724 - - transport and golgi organization 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040808-42]
56. psmd14 ENSDARG00000063100 15711 1.69 - 0.974 - - - - - - 0.716 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
57. cpsf3 ENSDARG00000027649 6897 1.686 - - - - - - - 0.815 0.871 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
58. APOA4_1 APOA4_1 3645 1.686 - 0.918 - - - - 0.768 - -
59. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 1.684 - - - - - - 0.729 0.955 - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
60. si:ch211-160e1.5 5586 1.684 - 0.959 - - - - - - 0.725 si:ch211-160e1.5
61. rabac1 ENSDARG00000004171 2708 1.682 - - - - - 0.730 - 0.952 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
62. CABZ01057013.1 CABZ01057013.1 1308 1.678 - - - - - 0.769 - 0.909 -
63. fermt2 ENSDARG00000020242 9351 1.671 - 0.887 - - - - - - 0.784 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
64. eps8l1 1598 1.669 - - - - - - 0.742 0.927 - eps8-like1, transcript variant X3
65. brox ENSDARG00000013659 1334 1.663 - - - - - 0.729 - - 0.934 BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
66. gabarapl2 ENSDARG00000027200 5120 1.659 - - - - - 0.781 - 0.878 - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
67. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.659 - - - - - 0.716 - 0.943 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
68. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 1.654 0.809 - - - - - 0.845 - - wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
69. tmem45b ENSDARG00000056239 2395 1.652 - - - - - 0.829 0.823 - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
70. pof1b ENSDARG00000054060 2355 1.645 - - - - - - 0.747 - 0.898 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
71. diabloa ENSDARG00000104172 2192 1.644 0.722 0.922 - - - - - - - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
72. serpinh1a ENSDARG00000075954 6488 1.639 - - - - - - - 0.869 0.770 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
73. wbp1lb ENSDARG00000029751 1072 1.634 0.833 - - - - - 0.801 - - WW domain binding protein 1-like b [Source:ZFIN;Acc:ZDB-GENE-050522-112]
74. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.632 - - - - - 0.765 - 0.867 - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
75. ankhd1 ENSDARG00000077860 5510 1.629 - 0.918 - - - - - 0.711 - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
76. frmd6 ENSDARG00000002332 2698 1.629 - - - - - 0.706 - - 0.923 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
77. map2k6 ENSDARG00000099184 8741 1.629 - - - - - 0.700 - 0.929 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
78. zgc:56530 zgc:56530 6300 1.623 - - - - - 0.784 - - 0.839
79. si:ch211-226m16.2 ENSDARG00000036785 2163 1.617 - - - - - - 0.716 0.901 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
80. nfkbiaa ENSDARG00000005481 948 1.612 0.727 - - - - 0.885 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
81. nipa2 ENSDARG00000055912 1574 1.608 - - - 0.719 - 0.889 - - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
82. znf185 ENSDARG00000103917 7195 1.607 - - - - - 0.802 - 0.805 - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
83. slc39a7 ENSDARG00000104451 6368 1.605 - - - - - 0.717 - 0.888 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
84. TSTA3 ENSDARG00000039666 1776 1.604 - - - - - 0.800 0.804 - - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
85. ABI3_1 ABI3_1 511 1.603 0.772 - - - - 0.831 - - -
86. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.589 0.740 - - - - - - - 0.849 calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
87. s100v1 ENSDARG00000070427 6633 1.585 - - - - - 0.852 0.733 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
88. brd4 ENSDARG00000078904 5367 1.581 - - - - - 0.781 - - 0.800 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
89. arl5c ENSDARG00000035719 1257 1.577 - - - - - 0.851 0.726 - - ADP-ribosylation factor-like 5C [Source:ZFIN;Acc:ZDB-GENE-040426-1866]
90. tmem18 ENSDARG00000036704 1784 1.552 - - - - - 0.849 - - 0.703 transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
91. SRGAP3 ENSDARG00000060309 5353 1.549 - - - - - 0.742 - 0.807 - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
92. oclna ENSDARG00000005108 3280 1.545 - - - - - 0.711 0.834 - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
93. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 1.539 - - - - - 0.703 - 0.836 - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
94. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.535 - - - - - 0.745 - 0.790 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
95. si:ch211-139n6.3 ENSDARG00000093230 147 1.526 - - - - - 0.797 0.729 - - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
96. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 1.524 - - - - - 0.729 0.795 - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
97. ntd5 ENSDARG00000040944 4988 1.52 - - - 0.726 - - - 0.794 - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
98. slc25a1b ENSDARG00000076381 6213 1.507 0.757 0.750 - - - - - - - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
99. aco1 ENSDARG00000026376 5034 1.497 0.730 - - - - - 0.767 - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
100. vwde ENSDARG00000103443 5758 1.491 - - - - - - - 0.754 0.737 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]

There are 1301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA