Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-18f7.2

Gene Name Gene ID Reads Annotation
si:dkey-18f7.2 si:dkey-18f7.2 895










Genes with expression patterns similar to si:dkey-18f7.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-18f7.2 si:dkey-18f7.2 895 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cpeb3 ENSDARG00000060103 2367 1.579 - 0.867 - - - 0.712 - - - cytoplasmic polyadenylation element binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-090312-68]
3. si:ch1073-441p17.1 ENSDARG00000095861 1212 1.567 - 0.762 - - - 0.805 - - - si:ch1073-441p17.1 [Source:ZFIN;Acc:ZDB-GENE-110411-140]
4. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.549 - - - - - - 0.746 0.803 - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
5. rint1 ENSDARG00000005547 898 1.548 - 0.823 - - - - - 0.725 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
6. ccnt2b ENSDARG00000036510 3353 1.525 - 0.714 - - - - 0.811 - - cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
7. slka ENSDARG00000061525 1678 1.521 - 0.764 - - - - 0.757 - - STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
8. mmd ENSDARG00000040387 4522 1.515 - 0.719 - - - 0.796 - - - monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]
9. REXO4 ENSDARG00000088619 655 1.507 - 0.739 - - - - - 0.768 - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
10. pdpk1b ENSDARG00000018285 957 1.501 - 0.780 - - - 0.721 - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
11. si:dkey-57k17.1 ENSDARG00000104697 442 1.499 - - - - - - 0.779 0.720 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
12. SEMA4C ENSDARG00000079611 610 1.498 - - - 0.778 - - 0.720 - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
13. slc35d2 ENSDARG00000089837 1606 1.497 - 0.702 - - - 0.795 - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
14. zgc:63831 ENSDARG00000009313 895 1.496 - 0.727 - - - - - 0.769 - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
15. ctr9 ENSDARG00000009170 1265 1.495 - 0.781 - - - - 0.714 - - CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
16. si:ch211-10d23.5 ENSDARG00000095510 2632 1.493 - 0.708 - - - - - 0.785 - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
17. smc5 ENSDARG00000044282 779 1.485 - 0.736 - 0.749 - - - - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
18. CU683898.1 CU683898.1 203 1.465 - - - 0.731 - - 0.734 - -
19. atf7ip ENSDARG00000069619 5495 1.463 - - - - - 0.744 0.719 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
20. kdsr ENSDARG00000012021 1560 1.46 - - - - - - 0.716 0.744 - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
21. pggt1b ENSDARG00000103464 441 1.456 - 0.729 - - - - - 0.727 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
22. C25H11orf49 C25H11orf49 287 1.453 - 0.713 - 0.740 - - - - -
23. brd2a ENSDARG00000022280 3481 1.452 - 0.711 - - - - 0.741 - - bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
24. POLD4 POLD4 626 1.448 - 0.701 - - - - 0.747 - -
25. PLEKHH3 ENSDARG00000070174 2117 1.447 - - - - - 0.729 - 0.718 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
26. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.444 - 0.737 - - - - 0.707 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
27. scaf4b ENSDARG00000018854 734 1.427 - - - - - - 0.710 0.717 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
28. ubl3b ENSDARG00000021556 1210 1.426 - 0.704 - - - - 0.722 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
29. E2F6 E2F6 1271 1.416 - - - - - 0.702 0.714 - -
30. taf3 ENSDARG00000045513 1819 1.414 - - - - - 0.702 0.712 - - TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
31. LPHN3 LPHN3 195 1.411 - - - - - - 0.706 0.705 -
32. cald1 cald1 147 1.409 - - - - - 0.703 0.706 - -
33. slc16a9b ENSDARG00000104687 826 0.919 - 0.919 - - - - - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
34. CPLX1 CPLX1 386 0.915 - - - - - - - 0.915 -
35. SLC22A23 ENSDARG00000078856 2921 0.907 - - - - - - - 0.907 - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
36. zdhhc8a ENSDARG00000042872 306 0.903 - - - - - - - 0.903 - zinc finger, DHHC-type containing 8a [Source:ZFIN;Acc:ZDB-GENE-091118-26]
37. NUP54 ENSDARG00000103296 433 0.889 - - - - - - - 0.889 - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
38. ampd3a ENSDARG00000005800 498 0.888 - - - - - - - 0.888 - adenosine monophosphate deaminase 3a [Source:ZFIN;Acc:ZDB-GENE-110407-2]
39. prpsap2 ENSDARG00000019326 1463 0.876 - - - - - - 0.876 - - phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
40. foxp1b ENSDARG00000014181 2594 0.875 - - - - - - 0.875 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
41. PCDH9 ENSDARG00000063264 1309 0.873 - - - - - 0.873 - - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
42. gmfb ENSDARG00000028327 6522 0.871 - 0.871 - - - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
43. prkx ENSDARG00000060716 530 0.868 - - - - - - - 0.868 - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
44. tspan18a ENSDARG00000056656 530 0.868 - - - - - - - 0.868 - tetraspanin 18a [Source:ZFIN;Acc:ZDB-GENE-040718-232]
45. mrpl15 ENSDARG00000101306 2796 0.864 - - - - - - - 0.864 - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
46. paip2b ENSDARG00000008706 4255 0.859 - 0.859 - - - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
47. FBXO33 ENSDARG00000075400 1164 0.859 - - - - - - - 0.859 - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
48. si:ch73-46j18.5 ENSDARG00000092467 6002 0.858 - 0.858 - - - - - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
49. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.857 - - - - - - 0.857 - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
50. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.853 - - - - - - - 0.853 - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
51. bloc1s4 ENSDARG00000007597 365 0.85 - - - - - - 0.850 - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
52. sbds ENSDARG00000027803 846 0.844 - 0.844 - - - - - - - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
53. klhl18 ENSDARG00000004306 448 0.844 - - - - - - - 0.844 - kelch-like family member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5785]
54. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 0.843 - 0.843 - - - - - - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
55. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 0.843 - - - - - - - 0.843 - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
56. lpar1 ENSDARG00000099840 2010 0.842 - - - - - - 0.842 - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
57. her8a ENSDARG00000016363 996 0.839 - - - - - - - 0.839 - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
58. snx27a ENSDARG00000033804 2249 0.839 - 0.839 - - - - - - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
59. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 0.838 - 0.838 - - - - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
60. shroom1 ENSDARG00000094181 2325 0.837 - 0.837 - - - - - - - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
61. Mar-07 Mar-07 2926 0.837 - 0.837 - - - - - - -
62. wdr54 ENSDARG00000010248 245 0.834 - - - - - - 0.834 - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
63. srrm2 ENSDARG00000037965 1967 0.833 - 0.833 - - - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
64. trim71 ENSDARG00000075593 2750 0.833 - 0.833 - - - - - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
65. mapk3 ENSDARG00000070573 6842 0.832 - 0.832 - - - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
66. ryk ENSDARG00000007231 1611 0.832 - - - - - - 0.832 - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
67. cplx4b ENSDARG00000059486 3192 0.83 - 0.830 - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
68. hs3st3b1b ENSDARG00000086645, ENSDARG00000113233 1194 0.829 - - - - - 0.829 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b [Source:ZFIN;Acc:ZDB-GENE-070202-5]
69. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 0.829 - 0.829 - - - - - - - pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
70. grb10a ENSDARG00000002013 1349 0.829 - 0.829 - - - - - - - growth factor receptor-bound protein 10a [Source:ZFIN;Acc:ZDB-GENE-040822-32]
71. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.828 - - - - - - 0.828 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
72. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.826 - 0.826 - - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
73. UQCC2 ENSDARG00000011272 1337 0.824 - 0.824 - - - - - - - ubiquinol-cytochrome c reductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1726]
74. cnp_1 ENSDARG00000070822 249 0.824 - - - - - - 0.824 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
75. PPP1R16A ENSDARG00000076980 40 0.822 - - - - - - 0.822 - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
76. fyco1a ENSDARG00000104500 652 0.821 0.821 - - - - - - - - FYVE and coiled-coil domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-110411-276]
77. MXD4 ENSDARG00000054031 1165 0.819 - 0.819 - - - - - - - MAX dimerization protein 4 [Source:ZFIN;Acc:ZDB-GENE-050208-44]
78. chd4b ENSDARG00000025789 14299 0.818 - 0.818 - - - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
79. CU459160.1 CU459160.1 104 0.817 - - - - - - - 0.817 -
80. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 0.817 - - - - - - - 0.817 - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
81. syncripl ENSDARG00000026723 3889 0.816 - - - - - - 0.816 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
82. kctd16b ENSDARG00000020102 83 0.816 - - - - - - - 0.816 - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
83. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 0.815 - 0.815 - - - - - - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
84. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.815 - - - - - - 0.815 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
85. CABZ01073168.1 CABZ01073168.1 280 0.814 - - - - - - - 0.814 -
86. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 0.814 - - - - - - - 0.814 - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
87. sp3a ENSDARG00000001549 1994 0.813 - 0.813 - - - - - - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
88. rnf14 ENSDARG00000043905 862 0.813 - 0.813 - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
89. ENSDARG00000087348 ENSDARG00000087348 2870 0.813 - - - - - - 0.813 - -
90. foxp4 ENSDARG00000076120 9458 0.813 - 0.813 - - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
91. CU019652.1 CU019652.1 665 0.811 - - - - - - - 0.811 -
92. srcap ENSDARG00000005236 1740 0.811 - - - - - - 0.811 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
93. TSPAN4 TSPAN4 941 0.811 - - - - - - - 0.811 -
94. ZC3H4 ENSDARG00000078355 1888 0.81 - 0.810 - - - - - - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
95. erbb2ip 403 0.81 - - - - - - 0.810 - - erbb2 interacting protein, transcript variant X3
96. zgc:112175 ENSDARG00000037810 402 0.809 - - - - - 0.809 - - - zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
97. actr1 ENSDARG00000011611 3879 0.809 - 0.809 - - - - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
98. ITFG3 ITFG3 1803 0.808 - 0.808 - - - - - - -
99. NBEAL1 ENSDARG00000099547 1112 0.808 - 0.808 - - - - - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
100. zgc:112962 ENSDARG00000069102 431 0.808 - - - - - 0.808 - - - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]

There are 784 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA