Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-187a12.4

Gene Name Gene ID Reads Annotation
si:dkey-187a12.4 127 si:dkey-187a12.4










Genes with expression patterns similar to si:dkey-187a12.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-187a12.4 127 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-187a12.4
2. prr14 ENSDARG00000089232 495 1.681 0.826 0.855 - - - - - - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
3. MMADHC ENSDARG00000005870 212 1.54 - 0.705 - - - - 0.835 - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
4. atp1b2b ENSDARG00000034424, ENSDARG00000113354 56 1.534 - - - - - 0.801 - - 0.733 ATPase Na+/K+ transporting subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-010718-1]
5. rtn4rl1b ENSDARG00000098528 31 1.446 - 0.701 - - - - - - 0.745 reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
6. TMEM27 TMEM27 261 1.407 - 0.705 - - - 0.702 - - -
7. chst12b ENSDARG00000077198, ENSDARG00000094981 15 0.958 - - - - - - 0.958 - - carbohydrate (chondroitin 4) sulfotransferase 12b [Source:ZFIN;Acc:ZDB-GENE-090312-144]
8. fzd3a ENSDARG00000021664 1958 0.956 - 0.956 - - - - - - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
9. il6st ENSDARG00000104693 55 0.955 - - - - - - 0.955 - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
10. exd2 ENSDARG00000016117 342 0.941 - 0.941 - - - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
11. GTPBP8 ENSDARG00000075033 231 0.94 - 0.940 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
12. plod3 ENSDARG00000076317 46 0.913 - - - - - - 0.913 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
13. si:ch211-255g12.7 si:ch211-255g12.7 44 0.906 - 0.906 - - - - - - -
14. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 0.897 - - - - - 0.897 - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
15. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 0.896 0.896 - - - - - - - - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
16. fut11 ENSDARG00000102402 56 0.895 - - - - - - 0.895 - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
17. hormad1 ENSDARG00000040254 12 0.895 - - - - - - 0.895 - - HORMA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-49]
18. zgc:174563 zgc:174563 198 0.893 - 0.893 - - - - - - -
19. proza ENSDARG00000037783, ENSDARG00000116864 500 0.893 - 0.893 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
20. smad3b ENSDARG00000010207 951 0.893 - 0.893 - - - - - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
21. BX664721.1 ENSDARG00000051804 21 0.889 - - - - - - 0.889 - -
22. ugt5e1 ENSDARG00000058048 25 0.889 - - - - - - 0.889 - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
23. si:dkey-32n7.7 ENSDARG00000063444 4 0.889 - - - - - - 0.889 - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
24. CR762483.1 ENSDARG00000114454 44 0.889 - - - - - - 0.889 - - growth-regulated alpha protein-like [Source:NCBI gene;Acc:101883994]
25. SNORA73_2 SNORA73_2 31 0.889 - - - - - - 0.889 - -
26. pstpip1a ENSDARG00000060860 23 0.889 - - - - - - 0.889 - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
27. ENDOD1_4 ENDOD1_4 2 0.889 - - - - - - 0.889 - -
28. OTOG ENSDARG00000068460 60 0.889 - - - - - - 0.889 - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
29. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 0.889 - - - - - - 0.889 - -
30. plat ENSDARG00000062707 491 0.888 - - - - - - 0.888 - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
31. spsb4a ENSDARG00000016084, ENSDARG00000116235 544 0.887 0.887 - - - - - - - - splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]
32. enpp5 ENSDARG00000070625 550 0.885 - 0.885 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
33. col15a1b ENSDARG00000061848 398 0.883 - 0.883 - - - - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
34. USP6 USP6 613 0.877 - 0.877 - - - - - - -
35. palmda ENSDARG00000001913 26 0.876 - - - - - 0.876 - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
36. FP102801.1 FP102801.1 294 0.875 - - - - - - 0.875 - -
37. mfsd4a mfsd4a 179 0.875 - - - - - - 0.875 - -
38. TIMM21 ENSDARG00000071594 722 0.875 - 0.875 - - - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
39. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.875 - 0.875 - - - - - - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
40. polr3gla ENSDARG00000012044 148 0.874 - - - - - 0.874 - - - polymerase (RNA) III (DNA directed) polypeptide G like a [Source:ZFIN;Acc:ZDB-GENE-040912-67]
41. arhgap4b ENSDARG00000015003 451 0.873 - 0.873 - - - - - - - Rho GTPase activating protein 4b [Source:ZFIN;Acc:ZDB-GENE-090311-38]
42. BX470189.1 ENSDARG00000067658 399 0.872 - - - - - - 0.872 - - uncharacterized LOC100150296 [Source:NCBI gene;Acc:100150296]
43. TC2N ENSDARG00000095067 146 0.871 0.871 - - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
44. slc8a3 ENSDARG00000004931 338 0.868 - 0.868 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
45. lcn15 ENSDARG00000067851 140 0.868 - - - - - 0.868 - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
46. asb2a asb2a 845 0.863 - 0.863 - - - - - - -
47. six1b ENSDARG00000026473 1908 0.863 - 0.863 - - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
48. FRMD5 ENSDARG00000075942 569 0.856 - 0.856 - - - - - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
49. tmcc2 ENSDARG00000046007 148 0.852 - 0.852 - - - - - - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
50. zgc:174222 ENSDARG00000103078 84 0.852 - - - - - - 0.852 - - zgc:174222 [Source:ZFIN;Acc:ZDB-GENE-080220-40]
51. rev3l ENSDARG00000058801 784 0.849 - 0.849 - - - - - - - REV3-like, polymerase (DNA directed), zeta, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050302-55]
52. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.848 - - - - - - 0.848 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
53. dachb ENSDARG00000034785, ENSDARG00000111845 109 0.846 - 0.846 - - - - - - - dachshund b [Source:ZFIN;Acc:ZDB-GENE-020402-4]
54. SMG9 ENSDARG00000076627 525 0.845 - 0.845 - - - - - - - smg9 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9385]
55. slc30a4 ENSDARG00000007180 158 0.842 - 0.842 - - - - - - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
56. grem2 grem2 743 0.841 - 0.841 - - - - - - -
57. col5a3a_1 ENSDARG00000098294 271 0.837 0.837 - - - - - - - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
58. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 0.836 - 0.836 - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
59. chp2 ENSDARG00000025788, ENSDARG00000113942 460 0.835 - 0.835 - - - - - - - calcineurin-like EF-hand protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5810]
60. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 0.834 - 0.834 - - - - - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
61. CCDC167 ENSDARG00000045850 1024 0.83 - 0.830 - - - - - - - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
62. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.829 - - - - - - 0.829 - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
63. s100t ENSDARG00000055589 453 0.829 - - - - - 0.829 - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
64. AL935046.1 AL935046.1 89 0.829 - 0.829 - - - - - - -
65. YRDC ENSDARG00000041428 221 0.828 - 0.828 - - - - - - - yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]
66. trmt5 ENSDARG00000069278 228 0.825 0.825 - - - - - - - - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
67. CU856173.1 CU856173.1 26 0.825 - - - - - 0.825 - - -
68. si:dkeyp-13d11.1 ENSDARG00000076343, ENSDARG00000096802 181 0.825 - - - - - 0.825 - - - si:dkeyp-13d11.1 [Source:ZFIN;Acc:ZDB-GENE-090313-377]
69. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 0.825 - - - - - 0.825 - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
70. myf5 ENSDARG00000007277 1051 0.824 - 0.824 - - - - - - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
71. ndufaf1 ENSDARG00000025549 42 0.821 0.821 - - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
72. kifap3b ENSDARG00000006862 613 0.821 - 0.821 - - - - - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
73. CR387932.2 CR387932.2 3 0.819 - - - - - - 0.819 - -
74. CU694319.1 CU694319.1 72 0.819 - - - - - - 0.819 - -
75. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.818 - 0.818 - - - - - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
76. taok3b ENSDARG00000094052 36 0.818 - - - - - - - - 0.818 TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
77. azi1 azi1 507 0.818 - 0.818 - - - - - - -
78. wu:fd55e03 wu:fd55e03 41 0.818 - - - - - - - - 0.818
79. me2 ENSDARG00000100718, ENSDARG00000114435 138 0.817 0.817 - - - - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
80. BX640547.1_1 ENSDARG00000092775 76 0.817 - 0.817 - - - - - - - uncharacterized LOC110439536 [Source:NCBI gene;Acc:110439536]
81. six4a ENSDARG00000004695 413 0.817 - 0.817 - - - - - - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
82. CELF6 ENSDARG00000101933 228 0.816 - - - - - - 0.816 - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
83. trim2b ENSDARG00000076174 250 0.815 0.815 - - - - - - - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
84. si:ch211-225p5.9 si:ch211-225p5.9 9 0.815 - - - - - - - - 0.815
85. trim3b ENSDARG00000005397 680 0.813 - 0.813 - - - - - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
86. dachd ENSDARG00000069440 271 0.813 - 0.813 - - - - - - - dachshund d [Source:ZFIN;Acc:ZDB-GENE-070427-2]
87. KEL ENSDARG00000076950 159 0.812 - 0.812 - - - - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
88. mkln1 ENSDARG00000025576 1122 0.812 - 0.812 - - - - - - - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
89. wdr62 ENSDARG00000060312 554 0.812 - 0.812 - - - - - - - WD repeat domain 62 [Source:ZFIN;Acc:ZDB-GENE-060503-291]
90. zgc:91811 zgc:91811 186 0.811 - 0.811 - - - - - - -
91. ugt2b3 46 0.811 - - - - - - - - 0.811 UDP glucuronosyltransferase 2 family, polypeptide B3
92. POLRMT ENSDARG00000101220 215 0.811 0.811 - - - - - - - - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
93. ifi35 ENSDARG00000075643 62 0.811 - 0.811 - - - - - - - interferon-induced protein 35 [Source:ZFIN;Acc:ZDB-GENE-100311-2]
94. daw1 ENSDARG00000021462 283 0.81 - 0.810 - - - - - - - dynein assembly factor with WDR repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-050419-255]
95. siva1 ENSDARG00000114552 624 0.809 0.809 - - - - - - - - SIVA1, apoptosis-inducing factor [Source:ZFIN;Acc:ZDB-GENE-050506-57]
96. arxa ENSDARG00000058011 440 0.809 - 0.809 - - - - - - - aristaless related homeobox a [Source:ZFIN;Acc:ZDB-GENE-990415-15]
97. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 0.808 - - - - - 0.808 - - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
98. myoz2a ENSDARG00000012311 1373 0.807 - 0.807 - - - - - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
99. emilin2a ENSDARG00000061196 57 0.804 0.804 - - - - - - - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
100. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 0.803 - 0.803 - - - - - - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]

There are 543 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA