Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-184d2.3

Gene Name Gene ID Reads Annotation
si:dkey-184d2.3 si:dkey-184d2.3 1536










Genes with expression patterns similar to si:dkey-184d2.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-184d2.3 si:dkey-184d2.3 1536 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cwc25 ENSDARG00000003382 2134 2.225 - 0.767 - - - - 0.753 0.705 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
3. uhmk1 ENSDARG00000059575 1486 1.639 - 0.849 - - - - 0.790 - - U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
4. arpc1a ENSDARG00000008383 7353 1.616 - 0.733 - - - - 0.883 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
5. DYNC1I2 DYNC1I2 4131 1.575 - 0.743 - - - - - 0.832 -
6. ptplb ptplb 6135 1.566 - 0.829 - - - - 0.737 - -
7. ctnna1 ENSDARG00000102441 7984 1.556 - - - - - - 0.816 0.740 - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
8. prrg4 ENSDARG00000030753 1008 1.534 - - - - - - 0.797 0.737 - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
9. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.522 - 0.757 - - - - 0.765 - - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
10. ppp1cbl ENSDARG00000102012 2301 1.514 - 0.779 - - - - 0.735 - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
11. TTF1_4 TTF1_4 504 1.504 - 0.724 - - - 0.780 - - -
12. slc38a5b ENSDARG00000014587 8461 1.499 - 0.783 - - - - 0.716 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
13. pabpc1b ENSDARG00000021140 5729 1.496 - 0.714 - - - - 0.782 - - poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]
14. zgc:92360 ENSDARG00000038151 2161 1.496 - 0.789 - - - - 0.707 - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
15. FBXO48 ENSDARG00000086184 110 1.492 - - - - - 0.758 - 0.734 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
16. NUDT12 ENSDARG00000100813 378 1.482 0.740 - - - - - - 0.742 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
17. ccdc3 ccdc3 559 1.477 - - - - - - 0.740 0.737 -
18. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.465 - - - - - - 0.751 0.714 - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
19. ACTR3 ENSDARG00000091138 1739 1.463 - 0.761 - - - - 0.702 - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
20. crkl ENSDARG00000028699 2966 1.46 - - - - - - 0.712 0.748 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
21. sp3a ENSDARG00000001549 1994 1.458 - - - - - 0.735 0.723 - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
22. ugt1b4 ENSDARG00000097024 1848 1.451 - - - - - 0.724 0.727 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
23. arhgef2 ENSDARG00000075819 2173 1.451 - 0.728 - - - - 0.723 - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
24. b3gnt3.1 ENSDARG00000043482 1991 1.449 0.719 0.730 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040625-129]
25. ap1s1 ENSDARG00000056803 3854 1.44 - 0.708 - - - - - 0.732 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
26. e2f7 ENSDARG00000008986 1439 1.41 - - - - - - 0.710 0.700 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
27. RNF169 ENSDARG00000042825 727 0.934 - - - - - - - 0.934 - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
28. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.934 - - - - - - - 0.934 - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
29. C10H21orf91 C10H21orf91 644 0.926 - - - - - - - 0.926 -
30. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.91 - - - - - - - 0.910 - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
31. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 0.905 - - - - - - - 0.905 - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
32. MARK3 MARK3 1767 0.897 - - - - - - - 0.897 -
33. mob1a ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 259 0.891 - 0.891 - - - - - - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
34. CU929431.1 CU929431.1 2234 0.888 - - - - - - - 0.888 -
35. nudc ENSDARG00000104837 1798 0.883 - - - - - - - 0.883 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
36. si:dkey-9i23.16 ENSDARG00000093954 929 0.882 - - - - - - - 0.882 - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
37. fynrk 527 0.877 - - - - - - 0.877 - - fyn-related Src family tyrosine kinase
38. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 0.877 - - - - - - 0.877 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
39. CCNYL1 ENSDARG00000099692 1330 0.875 - - - - - - - 0.875 - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
40. TCEB3 2429 0.874 - 0.874 - - - - - - - transcription elongation factor B (SIII), polypeptide 3
41. alcamb ENSDARG00000058538 5672 0.873 - 0.873 - - - - - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
42. rybpa ENSDARG00000037773 904 0.868 - - - - - - - 0.868 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
43. ptcd3 ENSDARG00000103856 2107 0.867 - - - - - - - 0.867 - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
44. spcs2 ENSDARG00000042823 10032 0.866 - - - - - - 0.866 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
45. eprs ENSDARG00000060494 4729 0.865 - - - - - - - 0.865 - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
46. ctnnd2b ENSDARG00000003779 964 0.863 - - - - - - - 0.863 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
47. AL954146.5 AL954146.5 202 0.862 - - - - - 0.862 - - -
48. rhbdf1 rhbdf1 1608 0.86 - - - - - - - 0.860 -
49. ap1s3b ENSDARG00000027966 1064 0.86 - - - - - - 0.860 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
50. iba57 ENSDARG00000063446 324 0.855 - - - - - 0.855 - - - IBA57, iron-sulfur cluster assembly [Source:ZFIN;Acc:ZDB-GENE-060929-712]
51. si:ch211-210c8.6 ENSDARG00000017811 908 0.853 - - - - - - 0.853 - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
52. aim1a 2981 0.852 - - - - - - 0.852 - - crystallin beta-gamma domain containing 1a, transcript variant X1
53. C3H16orf13 C3H16orf13 652 0.851 - 0.851 - - - - - - -
54. clasp1a ENSDARG00000010280 1158 0.851 - - - - - - 0.851 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
55. kansl3 ENSDARG00000029556 2487 0.848 - - - - - - - 0.848 - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
56. CABZ01064972.1 ENSDARG00000098966 199 0.846 - - - - - 0.846 - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
57. usf1 ENSDARG00000041689 1619 0.846 - 0.846 - - - - - - - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
58. nop2 ENSDARG00000043304 2511 0.844 - - - - - 0.844 - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
59. tax1bp1b ENSDARG00000056856 4526 0.841 - - - - - - 0.841 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
60. TSTD1 TSTD1 608 0.84 - 0.840 - - - - - - -
61. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 0.84 - - - - - - - 0.840 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
62. SLC24A2 ENSDARG00000042988 242 0.84 - - - - - 0.840 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
63. nup188 ENSDARG00000030022 2398 0.838 - 0.838 - - - - - - - nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
64. CR848664.2 CR848664.2 876 0.838 - - - - - - 0.838 - -
65. RNF144B ENSDARG00000024940 1559 0.838 - - - - - - - 0.838 - ring finger protein 144B [Source:ZFIN;Acc:ZDB-GENE-040426-1292]
66. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 0.837 - - - - - - 0.837 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
67. LIMA1 LIMA1 908 0.836 - - - - - - 0.836 - -
68. fam60al 2846 0.836 - 0.836 - - - - - - - family with sequence similarity 60, member A, like
69. exosc1 ENSDARG00000059841 6895 0.834 - 0.834 - - - - - - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
70. ccl-c5a ccl-c5a 217 0.833 - - - - - 0.833 - - -
71. gnb1b ENSDARG00000104372 1077 0.832 - - - - - - - 0.832 - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
72. srrm1 ENSDARG00000001244 4972 0.83 - 0.830 - - - - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
73. ptpn1 ENSDARG00000007923 3647 0.827 - - - - - - 0.827 - - protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
74. TMEM87A TMEM87A 2407 0.827 - - - - - - 0.827 - -
75. aspdh ENSDARG00000038297 39 0.827 - - - - - 0.827 - - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
76. si:ch211-270n8.4 87 0.826 - - - - - 0.826 - - - si:ch211-270n8.4
77. timm10 ENSDARG00000069116 4459 0.825 - - - - - 0.825 - - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
78. fn1 fn1 2538 0.825 - 0.825 - - - - - - -
79. CR354611.2 CR354611.2 2040 0.824 - - - - - - 0.824 - -
80. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 0.824 - 0.824 - - - - - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
81. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 0.824 - - - - - - 0.824 - - dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
82. fam160a2 ENSDARG00000078188 546 0.824 - 0.824 - - - - - - - family with sequence similarity 160, member A2 [Source:ZFIN;Acc:ZDB-GENE-070912-291]
83. pak1ip1 ENSDARG00000044488 1995 0.824 - - - - - - 0.824 - - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
84. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 0.823 - - - - - - - 0.823 - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
85. sepw2b 3942 0.822 - 0.822 - - - - - - - selenoprotein W, 2b
86. tjp2a ENSDARG00000063309 1947 0.822 - 0.822 - - - - - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
87. sec63 ENSDARG00000017740 3789 0.822 - 0.822 - - - - - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
88. mb ENSDARG00000031952 351 0.82 - - - - - 0.820 - - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
89. ptprfa ENSDARG00000103479 1250 0.819 - - - - - - 0.819 - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
90. PTGFRN_1 ENSDARG00000075505 1447 0.819 - 0.819 - - - - - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
91. C16H1orf172 C16H1orf172 909 0.817 - - - - - - 0.817 - -
92. trrap ENSDARG00000100623 3429 0.816 - 0.816 - - - - - - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
93. col6a2 ENSDARG00000061436 5063 0.816 - 0.816 - - - - - - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
94. hsf2 ENSDARG00000053097 1188 0.816 - 0.816 - - - - - - - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
95. alg2 ENSDARG00000070399 772 0.814 - 0.814 - - - - - - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
96. alkbh4 ENSDARG00000052247 306 0.814 - - - - - 0.814 - - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
97. si:ch211-161h7.4 ENSDARG00000087238 4399 0.813 - 0.813 - - - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
98. ENSDARG00000095341 ENSDARG00000095341 488 0.813 - - - - - - 0.813 - -
99. bcap29 ENSDARG00000016231 299 0.813 - - - - - - 0.813 - - B cell receptor associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-050522-468]
100. lgals2b ENSDARG00000038153 2196 0.812 - 0.812 - - - - - - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]

There are 858 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA