Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-179k24.3

Gene Name Gene ID Reads Annotation
si:dkey-179k24.3 si:dkey-179k24.3 3










Genes with expression patterns similar to si:dkey-179k24.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-179k24.3 si:dkey-179k24.3 3 6 1.000 - 1.000 1.000 1.000 1.000 - - 1.000
2. CR848836.1 ENSDARG00000097508 1 2 - - - 1.000 1.000 - - - -
3. CD44 CD44 11 2 1.000 - - 1.000 - - - - -
4. tecrl2 tecrl2 11 1.944 1.000 - - - - 0.944 - - -
5. myh6 ENSDARG00000090637 66 1.927 - - - 0.933 0.994 - - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
6. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.865 0.865 - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
7. si:dkey-208k22.2 si:dkey-208k22.2 9 1.835 - - - 0.835 1.000 - - - -
8. shox2 ENSDARG00000075713 104 1.818 1.000 - - - 0.818 - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
9. CR848784.2 ENSDARG00000111157 16 1.767 1.000 - 0.767 - - - - - -
10. PIK3R6_1 PIK3R6_1 1 1.767 - - 0.767 - 1.000 - - - -
11. CU570981.1 CU570981.1 9 1.767 - - 0.767 - 1.000 - - - -
12. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1.767 - - 0.767 1.000 - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
13. CABZ01066717.2 CABZ01066717.2 10 1.759 1.000 - 0.759 - - - - - -
14. MPPED1 ENSDARG00000088181 117 1.743 1.000 - - - 0.743 - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
15. si:ch73-335d12.1 si:ch73-335d12.1 1 1.71 - - - - 1.000 0.710 - - -
16. fbxo43 ENSDARG00000104186 40 1.71 1.000 - - - - 0.710 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
17. si:dkey-9c18.1 si:dkey-9c18.1 3 1.71 - - - - 1.000 0.710 - - -
18. pak1_1 ENSDARG00000103959 28 1.71 1.000 - - - - 0.710 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
19. CT027762.3 CT027762.3 17 1.698 0.871 - - 0.827 - - - - -
20. MASP1 ENSDARG00000068726 34 1.654 0.723 - - 0.931 - - - - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
21. GPT GPT 2 1.644 - - 0.767 - 0.877 - - - -
22. BEND2_1 BEND2_1 45 1.558 - - - 0.817 0.741 - - - -
23. si:dkey-250k15.4 ENSDARG00000092169 19 1.521 - - - - 0.811 0.710 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
24. or125-4 ENSDARG00000095417 2 1.482 - - - - - 0.710 - - 0.772 odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
25. gpr158 gpr158 52 1.466 0.720 - - - - 0.746 - - -
26. si:dkeyp-23e4.3 ENSDARG00000074819 42 1.44 0.723 - - - - 0.717 - - - si:dkeyp-23e4.3 [Source:ZFIN;Acc:ZDB-GENE-091118-19]
27. CR854899.1 ENSDARG00000102357 8 1.431 - - - 0.721 - 0.710 - - -
28. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
29. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
30. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
31. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
32. crp6 ENSDARG00000071457 2 1 - - - 1.000 - - - - - C-reactive protein 6 [Source:ZFIN;Acc:ZDB-GENE-060503-881]
33. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
34. dio3a 19 1 - - - - - 1.000 - - - deiodinase, iodothyronine, type IIIa
35. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
36. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
37. CR936540.2 CR936540.2 4 1 1.000 - - - - - - - -
38. slc6a4b ENSDARG00000057017 18 1 - - - 1.000 - - - - - solute carrier family 6 (neurotransmitter transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-060314-2]
39. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
40. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
41. scn1a 8 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
42. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
43. fibcd1 ENSDARG00000060393, ENSDARG00000109954 0 1 - - - - - - - - 1.000 fibrinogen C domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070424-245]
44. SERINC4 ENSDARG00000044815 45 1 1.000 - - - - - - - - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
45. slc45a3 ENSDARG00000075975 1 1 - - - 1.000 - - - - - solute carrier family 45, member 3 [Source:ZFIN;Acc:ZDB-GENE-070509-3]
46. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
47. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
48. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
49. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
50. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
51. si:ch211-191a6.3 si:ch211-191a6.3 6 1 1.000 - - - - - - - -
52. si:dkey-29p23.3 si:dkey-29p23.3 3 1 1.000 - - - - - - - -
53. si:ch211-274p24.4 ENSDARG00000087088 36 1 1.000 - - - - - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
54. si:dkey-4m13.3 6 1 1.000 - - - - - - - - si:dkey-4m13.3
55. BX248582.3 BX248582.3 3 1 - - - 1.000 - - - - -
56. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
57. znf106b ENSDARG00000091947 108 1 1.000 - - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
58. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
59. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 1.000 - - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
60. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
61. map3k8 ENSDARG00000061710 76 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
62. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 1 - - - - - - - - 1.000 retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
63. large 9 1 - - - 1.000 - - - - - like-glycosyltransferase, transcript variant X1
64. ralgapa1 ENSDARG00000076889 36 1 1.000 - - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
65. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
66. MOB2 MOB2 4 1 - - - - 1.000 - - - -
67. tcte1 ENSDARG00000077387 2 1 - - - - - - - - 1.000 t-complex-associated-testis-expressed 1 [Source:ZFIN;Acc:ZDB-GENE-120406-12]
68. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
69. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
70. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
71. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
72. si:dkey-100h21.2 si:dkey-100h21.2 30 1 - - - 1.000 - - - - -
73. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
74. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
75. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
76. men1_1 ENSDARG00000089456 3 1 - - - 1.000 - - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
77. FP103003.1_1 FP103003.1_1 6 1 - - - 1.000 - - - - -
78. FP085391.2 FP085391.2 85 1 1.000 - - - - - - - -
79. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
80. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
81. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
82. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
83. trmt2b ENSDARG00000033967 127 1 1.000 - - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
84. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
85. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
86. bcl11aa ENSDARG00000061352 61 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
87. katnal2 ENSDARG00000012275 0 1 - - - - - - - - 1.000 katanin p60 subunit A-like 2 [Source:ZFIN;Acc:ZDB-GENE-051113-156]
88. CABZ01080434.1 ENSDARG00000102438 4 1 - - - 1.000 - - - - -
89. ccna1 ENSDARG00000043236 13 1 - - 1.000 - - - - - - cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-040311-2]
90. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
91. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
92. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 1.000 - - - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
93. si:dkey-148e22.3 si:dkey-148e22.3 4 1 1.000 - - - - - - - -
94. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
95. prkacbb ENSDARG00000059125 7 1 - - - 1.000 - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
96. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - 1.000 - - - - - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
97. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
98. C18H15orf61 C18H15orf61 104 1 1.000 - - - - - - - -
99. si:ch1073-312b22.1 si:ch1073-312b22.1 6 1 - - - 1.000 - - - - -
100. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]

There are 929 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA