Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-178e17.3

Gene Name Gene ID Reads Annotation
si:dkey-178e17.3 ENSDARG00000058658 271 si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]










Genes with expression patterns similar to si:dkey-178e17.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-178e17.3 ENSDARG00000058658 271 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
2. nanp ENSDARG00000075143, ENSDARG00000114467 328 2.497 - 0.794 - - - 0.906 0.797 - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
3. wdr35 ENSDARG00000069269 492 1.848 0.944 - - - - - - 0.904 - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
4. swt1 ENSDARG00000094010 472 1.828 0.941 - - - - - - 0.887 - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
5. ppp6r2b ENSDARG00000069654 323 1.819 - - - - - 0.890 - 0.929 - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
6. AL929022.2 AL929022.2 567 1.797 0.929 - - - - - - 0.868 -
7. pex10 ENSDARG00000041511 52 1.797 - 0.881 - - - - - 0.916 - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
8. SPAG5 SPAG5 1117 1.756 0.934 0.822 - - - - - - -
9. nhej1 ENSDARG00000058893 172 1.752 - - - - - - 0.869 0.883 - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
10. chmp3 ENSDARG00000038064 577 1.717 0.908 - - - - 0.809 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
11. brap ENSDARG00000008560 821 1.712 0.981 - - - - - 0.731 - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
12. adamtsl7 ENSDARG00000055439 575 1.697 - - - - - 0.848 0.849 - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
13. hrasb ENSDARG00000005651 662 1.692 - 0.839 - - - - - 0.853 - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
14. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.638 0.918 - - - - 0.720 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
15. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.618 0.895 0.723 - - - - - - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
16. vps13d ENSDARG00000017986 183 1.61 - - 0.724 - - - - 0.886 - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
17. brd9 ENSDARG00000017143 936 1.609 0.873 - - - - - - 0.736 - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
18. LENG9 ENSDARG00000062374, ENSDARG00000111560 182 1.604 - - - - - 0.801 0.803 - - leukocyte receptor cluster (LRC) member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-607]
19. crabp2a_1 ENSDARG00000073978 888 1.583 - 0.832 - - - 0.751 - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
20. fam129aa ENSDARG00000042055 222 1.577 - - - - - 0.715 - 0.862 - family with sequence similarity 129, member Aa [Source:ZFIN;Acc:ZDB-GENE-041014-181]
21. gnav1 ENSDARG00000043006 305 1.569 - 0.747 - - - 0.822 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
22. map2k2b ENSDARG00000068918 676 1.565 - 0.858 - - - 0.707 - - - mitogen-activated protein kinase kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080219-34]
23. CPN2 CPN2 682 1.545 0.839 - - - - - 0.706 - -
24. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.539 - 0.808 - - - 0.731 - - -
25. abcd3a ENSDARG00000104085, ENSDARG00000110888, ENSDARG00000116461 888 1.515 - - - - - 0.733 - 0.782 - ATP-binding cassette, sub-family D (ALD), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2868]
26. bmp2a ENSDARG00000013409 303 1.509 - 0.783 - - - 0.726 - - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
27. mir454b 395 1.5 - 0.705 - - - - - 0.795 - microRNA 454b
28. C8H9orf3 C8H9orf3 414 1.494 - 0.738 0.756 - - - - - -
29. CABZ01049057.1 CABZ01049057.1 479 1.493 - - - - - 0.712 0.781 - -
30. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.461 0.710 - - - - 0.751 - - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
31. sall4 ENSDARG00000044485 1694 1.461 - - 0.747 - - 0.714 - - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
32. SACM1L SACM1L 416 1.451 - - 0.723 - - 0.728 - - -
33. sos1 ENSDARG00000100503 388 1.43 - - - - - - 0.708 0.722 - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
34. vstm4a ENSDARG00000010154 129 1.429 - - - - - - 0.704 0.725 - V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]
35. LTBP1 ENSDARG00000056922 216 1.428 - - 0.706 - - - 0.722 - - latent transforming growth factor beta binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091202-8]
36. si:dkey-92i17.2 ENSDARG00000093612 707 1.426 - 0.706 - - - 0.720 - - - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
37. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.423 - - - - - - 0.718 0.705 - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
38. hyi ENSDARG00000030166 1199 0.988 0.988 - - - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
39. c7a ENSDARG00000042172 716 0.987 0.987 - - - - - - - - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
40. wnt10a ENSDARG00000017155 491 0.986 0.986 - - - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
41. rgs3b ENSDARG00000035132 876 0.98 0.980 - - - - - - - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
42. thap4 ENSDARG00000077323 434 0.978 0.978 - - - - - - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
43. eva1ba ENSDARG00000102701 1480 0.973 0.973 - - - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
44. NFRKB ENSDARG00000091512 646 0.971 0.971 - - - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
45. ap5s1 ENSDARG00000076755 318 0.971 0.971 - - - - - - - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
46. sema3d ENSDARG00000017369 212 0.969 0.969 - - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
47. chd1l ENSDARG00000015471 1142 0.968 0.968 - - - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
48. cpsf5 cpsf5 1841 0.966 0.966 - - - - - - - -
49. pdk1 ENSDARG00000013128 526 0.965 0.965 - - - - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
50. EPS8L2 ENSDARG00000058108 484 0.964 0.964 - - - - - - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
51. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.964 0.964 - - - - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
52. prickle1a ENSDARG00000040649 700 0.963 0.963 - - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
53. osgn1 ENSDARG00000052279 5607 0.961 0.961 - - - - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
54. sh3yl1 ENSDARG00000074393 815 0.961 0.961 - - - - - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
55. zgc:92313 ENSDARG00000040513 790 0.96 0.960 - - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
56. rhov ENSDARG00000070434 808 0.959 0.959 - - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
57. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.957 0.957 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
58. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.957 0.957 - - - - - - - -
59. si:ch211-157l15.4 si:ch211-157l15.4 92 0.957 0.957 - - - - - - - -
60. wu:fc34e06 1793 0.957 0.957 - - - - - - - - wu:fc34e06, transcript variant X10
61. PTPDC1 PTPDC1 30 0.957 0.957 - - - - - - - -
62. pycr1 pycr1 1258 0.957 0.957 - - - - - - - -
63. actr5 ENSDARG00000098235 237 0.956 0.956 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
64. ugt5b4 ENSDARG00000091916 130 0.956 0.956 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
65. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.956 0.956 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
66. si:ch211-270n8.3 87 0.956 0.956 - - - - - - - - si:ch211-270n8.3, transcript variant X2
67. fam155a ENSDARG00000075858 91 0.956 0.956 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
68. ACOT12 ENSDARG00000054534 61 0.955 0.955 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
69. gdap1l1 ENSDARG00000028628 233 0.955 0.955 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
70. trim25l ENSDARG00000020863 292 0.955 0.955 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
71. arhgap19 ENSDARG00000083189 210 0.955 0.955 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
72. chmp6b ENSDARG00000102024 37 0.955 - - - - - - - 0.955 - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
73. arglu1b ENSDARG00000018319 1110 0.954 0.954 - - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
74. C2H7orf25 C2H7orf25 209 0.954 0.954 - - - - - - - -
75. zgc:56585 ENSDARG00000026236 704 0.952 0.952 - - - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
76. MYH9 MYH9 158 0.951 - - - - - - - 0.951 -
77. bub1 ENSDARG00000077029 634 0.951 0.951 - - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
78. ing5a ENSDARG00000022413 268 0.95 0.950 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
79. si:dkey-167k11.1 si:dkey-167k11.1 14 0.95 - - - - - - - 0.950 -
80. CU855931.2 CU855931.2 13 0.95 - - - - - - - 0.950 -
81. vps11 ENSDARG00000036338 421 0.95 0.950 - - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
82. si:dkey-148f24.5 si:dkey-148f24.5 7 0.95 - - - - - - - 0.950 -
83. LONRF2 LONRF2 721 0.95 0.950 - - - - - - - -
84. SLC35A3_1 SLC35A3_1 35 0.95 - - - - - - - 0.950 -
85. rnf170 ENSDARG00000104069 838 0.95 0.950 - - - - - - - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
86. si:dkey-152b24.7 ENSDARG00000099715 26 0.95 - - - - - - - 0.950 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
87. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 0.95 0.950 - - - - - - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
88. CU633477.1 CU633477.1 19 0.95 - - - - - - - 0.950 -
89. CABZ01078944.1 CABZ01078944.1 9 0.95 - - - - - - - 0.950 -
90. lzic ENSDARG00000055899 638 0.95 0.950 - - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
91. cib1 ENSDARG00000103118 291 0.949 0.949 - - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
92. RBM20 74 0.949 - - - - - - - 0.949 - RNA binding motif protein 20, transcript variant X1
93. efnb2b ENSDARG00000074050 77 0.949 0.949 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
94. si:ch211-218c6.8 ENSDARG00000092364 1270 0.949 0.949 - - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
95. bon bon 20 0.949 - - - - - - - 0.949 -
96. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.948 0.948 - - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
97. mrpl16 ENSDARG00000075325 592 0.948 0.948 - - - - - - - - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
98. gmfb ENSDARG00000028327 6522 0.948 0.948 - - - - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
99. rhogb ENSDARG00000004301 358 0.948 0.948 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
100. pvrl3l pvrl3l 943 0.948 0.948 - - - - - - - -

There are 1116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA