Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-173l11.3

Gene Name Gene ID Reads Annotation
si:dkey-173l11.3 si:dkey-173l11.3 14










Genes with expression patterns similar to si:dkey-173l11.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-173l11.3 si:dkey-173l11.3 14 3 - 1.000 - - 1.000 - 1.000 - -
2. TNFRSF11B ENSDARG00000098377 98 1.903 - 0.978 - - - - 0.925 - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
3. elavl2 ENSDARG00000040732 44 1.85 - 1.000 - - - - 0.850 - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
4. si:ch211-222k6.3 ENSDARG00000071578 127 1.741 - 0.915 - - - - 0.826 - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
5. si:dkey-115f9.2 si:dkey-115f9.2 18 1.71 - - - - 0.710 - 1.000 - -
6. msi2a ENSDARG00000033901, ENSDARG00000114442 256 1.653 - 0.870 - - - - 0.783 - - musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]
7. IGFN1_2 IGFN1_2 3 1.588 - - - - 0.824 - 0.764 - -
8. stm ENSDARG00000035694 1567 1.582 - 0.776 - - - - 0.806 - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
9. si:dkey-105h11.2 13 1.561 - - - - 0.711 - 0.850 - - si:dkey-105h11.2
10. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - - - - - 1.000 - -
11. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
12. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
13. VSIG10L ENSDARG00000089237 12 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
14. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
15. CABZ01055343.1 CABZ01055343.1 12 1 - - - - - - 1.000 - -
16. mgat3 mgat3 195 1 - - - - - - 1.000 - -
17. si:ch211-284e13.4 ENSDARG00000060330 6 1 - 1.000 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
18. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
19. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
20. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
21. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
22. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - - - - 1.000 - -
23. dio2 ENSDARG00000094857 17 1 - 1.000 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
24. CR388416.3 CR388416.3 1 1 - - - - - - 1.000 - -
25. pdk2 pdk2 32 1 - - - - - - 1.000 - -
26. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - 1.000 - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
27. BX004816.4 BX004816.4 33 1 - 1.000 - - - - - - -
28. CT573322.1 CT573322.1 38 1 - - - - - - 1.000 - -
29. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
30. wdr27_1 ENSDARG00000053386 1 1 - - - - - - 1.000 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
31. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
32. U6_27 U6_27 1 1 - - - - - - 1.000 - -
33. AL929220.1 ENSDARG00000103323 14 1 - - - - - - 1.000 - -
34. zgc:174153 ENSDARG00000079376 12007 1 - - - - - - 1.000 - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
35. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
36. gper gper 4 1 - - - - - - 1.000 - -
37. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - - - 1.000 - -
38. zgc:66484 ENSDARG00000030478 167 1 - - - - - - 1.000 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
39. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
40. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
41. c1qtnf5 ENSDARG00000056134 729 1 - - - - - - 1.000 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
42. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
43. dand5 ENSDARG00000036471 8 1 - - - - - - 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
44. CU302326.3 CU302326.3 6 1 - - - - - - 1.000 - -
45. grifin ENSDARG00000033382 141 1 - - - - - - 1.000 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
46. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
47. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
48. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - 1.000 - -
49. si:dkey-211g8.6 ENSDARG00000063088 19 1 - - - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
50. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - 1.000 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
51. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
52. GPR97 GPR97 9 1 - 1.000 - - - - - - -
53. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
54. si:ch211-250m6.8 si:ch211-250m6.8 51 1 - - - - - - 1.000 - -
55. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
56. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
57. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
58. CLCN2 CLCN2 8 1 - - - - - - 1.000 - -
59. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
60. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - - - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
61. si:dkey-192i18.3 si:dkey-192i18.3 47 1 - 1.000 - - - - - - -
62. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
63. si:dkey-13m3.1 si:dkey-13m3.1 45 1 - - - - - - 1.000 - -
64. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
65. gpr158 gpr158 52 1 - - - - - - 1.000 - -
66. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
67. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
68. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
69. zgc:92326 zgc:92326 94 1 - 1.000 - - - - - - -
70. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
71. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
72. FOLR1 FOLR1 25 1 - - - - - - 1.000 - -
73. CU929163.1 CU929163.1 11 1 - 1.000 - - - - - - -
74. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
75. aox1 aox1 14 1 - - - - - - 1.000 - -
76. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
77. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
78. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
79. efhb ENSDARG00000069703 9 1 - - - - - - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
80. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
81. btr29 ENSDARG00000099138 5 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
82. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
83. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor
84. tirap ENSDARG00000074371 10 1 - 1.000 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
85. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - 1.000 - -
86. nfixb ENSDARG00000061836 7 1 - - - - - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
87. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
88. sumo2a ENSDARG00000104390 4 1 - - - - - - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
89. tmprss13a ENSDARG00000100969 84 1 - 1.000 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
90. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
91. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
92. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
93. SOX8 SOX8 22 1 - - - - - - 1.000 - -
94. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - 1.000 - - si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
95. CT025934.2 CT025934.2 22 1 - - - - - - 1.000 - -
96. SNORD18_2 SNORD18_2 7 1 - - - - - - 1.000 - -
97. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
98. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
99. slc25a29 ENSDARG00000057352 9 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
100. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]

There are 868 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA