Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-167i21.4

Gene Name Gene ID Reads Annotation
si:dkey-167i21.4 si:dkey-167i21.4 12










Genes with expression patterns similar to si:dkey-167i21.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-167i21.4 si:dkey-167i21.4 12 6 - 1.000 1.000 1.000 1.000 - - 1.000 1.000
2. pdk3a ENSDARG00000014527 15 1.94 - - 0.940 - - - - - 1.000 pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
3. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 1.935 - 1.000 0.935 - - - - - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
4. ptx3b ENSDARG00000079515 10 1.935 - 1.000 0.935 - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
5. si:dkey-58f10.4 ENSDARG00000094820 3 1.916 - 1.000 - - - - - 0.916 - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
6. RUNDC3A RUNDC3A 204 1.773 - 0.953 0.820 - - - - - -
7. wisp1a ENSDARG00000054331 26 1.772 - 1.000 - - - - - - 0.772 WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
8. si:ch211-209p16.1 si:ch211-209p16.1 1 1.772 - 1.000 - - - - - - 0.772
9. PEG3_13 PEG3_13 5 1.772 - 1.000 - - - - - - 0.772
10. si:dkey-53f14.2 si:dkey-53f14.2 4 1.772 - 1.000 - - - - - - 0.772
11. nanog ENSDARG00000075113 10 1.764 - 1.000 - 0.764 - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
12. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.764 - 1.000 - 0.764 - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
13. wu:fb63c12 26 1.764 - 1.000 - 0.764 - - - - - wu:fb63c12
14. AL929220.1 ENSDARG00000103323 14 1.764 - 1.000 - 0.764 - - - - -
15. si:dkey-14d8.2 38 1.745 - 1.000 0.745 - - - - - - si:dkey-14d8.2
16. BX470083.4 ENSDARG00000115059 8 1.726 - 1.000 - - 0.726 - - - -
17. foxg1b ENSDARG00000032705 354 1.71 - 1.000 - - - - - - 0.710 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
18. si:ch211-117m20.4 ENSDARG00000094286 7 1.702 - - 0.930 - - - - - 0.772 si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
19. MAP3K2 ENSDARG00000062884 34 1.556 - - - 0.739 - - - 0.817 - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
20. atp1a3b ENSDARG00000104139 14 1.538 - - - - - - - 0.760 0.778 ATPase Na+/K+ transporting subunit alpha 3b [Source:ZFIN;Acc:ZDB-GENE-001212-8]
21. si:rp71-81e14.2 ENSDARG00000103077, ENSDARG00000109312 8 1.508 - - - 0.736 - - - - 0.772 si:rp71-81e14.2 [Source:ZFIN;Acc:ZDB-GENE-060503-95]
22. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 1.459 - - 0.747 0.712 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
23. smtna ENSDARG00000074652 6 1 - 1.000 - - - - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
24. CR538726.1 ENSDARG00000097179 321 1 - 1.000 - - - - - - -
25. CABZ01090303.1 CABZ01090303.1 2 1 - 1.000 - - - - - - -
26. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - 1.000 - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
27. CU464087.2 CU464087.2 15 1 - 1.000 - - - - - - -
28. CPNE8 ENSDARG00000025189 11 1 - 1.000 - - - - - - - copine VIII [Source:ZFIN;Acc:ZDB-GENE-100809-1]
29. PSTPIP2 ENSDARG00000089569 1 1 - 1.000 - - - - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
30. CU984579.1 ENSDARG00000116863 15 1 - 1.000 - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
31. slco1f3 ENSDARG00000105691 6 1 - 1.000 - - - - - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
32. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 - 1.000 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
33. slc34a1b ENSDARG00000054658 1 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
34. INPP5A 1 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase A
35. si:dkey-246g23.2 ENSDARG00000062964 5 1 - 1.000 - - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
36. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1 - 1.000 - - - - - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
37. ifitm5 ENSDARG00000105153 132 1 - 1.000 - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
38. lgi3 ENSDARG00000041358 46 1 - 1.000 - - - - - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
39. dvr1 dvr1 24 1 - 1.000 - - - - - - -
40. MORC4 MORC4 4 1 - 1.000 - - - - - - -
41. SLC22A14 SLC22A14 24 1 - 1.000 - - - - - - -
42. trhrb ENSDARG00000036159 11 1 - 1.000 - - - - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
43. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - 1.000 - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
44. zgc:174688 zgc:174688 170 1 - 1.000 - - - - - - -
45. sept5b ENSDARG00000036031 188 1 - 1.000 - - - - - - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
46. CABZ01012080.1 CABZ01012080.1 10 1 - 1.000 - - - - - - -
47. diras1b ENSDARG00000009372 0 1 - 1.000 - - - - - - - DIRAS family, GTP-binding RAS-like 1b [Source:ZFIN;Acc:ZDB-GENE-070912-620]
48. CNTNAP3 ENSDARG00000067824 25 1 - 1.000 - - - - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
49. hs6st1a ENSDARG00000054754 1 1 - - - - - - - - 1.000 heparan sulfate 6-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050524-1]
50. ZNF768 ZNF768 1 1 - 1.000 - - - - - - -
51. cdc42ep2 ENSDARG00000053959 32 1 - 1.000 - - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
52. tatdn2 ENSDARG00000070618 10 1 - 1.000 - - - - - - - TatD DNase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081022-51]
53. SLITRK4 ENSDARG00000079781 54 1 - 1.000 - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
54. ipp ENSDARG00000075339 3 1 - 1.000 - - - - - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
55. DMXL2 ENSDARG00000091293 3 1 - 1.000 - - - - - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
56. omga ENSDARG00000086573 3 1 - 1.000 - - - - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
57. hmgb2a ENSDARG00000029722 28 1 - 1.000 - - - - - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
58. KCNN2 ENSDARG00000014939 25 1 - 1.000 - - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
59. tnni2a.3 ENSDARG00000013752 15 1 - 1.000 - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
60. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - 1.000 - - - - - - -
61. ahr1a ENSDARG00000020046 2 1 - 1.000 - - - - - - - aryl hydrocarbon receptor 1a [Source:ZFIN;Acc:ZDB-GENE-020531-2]
62. neurod6a ENSDARG00000040008 17 1 - 1.000 - - - - - - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
63. gabrr2a ENSDARG00000052982 21 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
64. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - 1.000 - - - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
65. si:ch211-10h8.1 si:ch211-10h8.1 10 1 - 1.000 - - - - - - -
66. CABZ01112850.1 CABZ01112850.1 7 1 - 1.000 - - - - - - -
67. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - 1.000 - - - - - - -
68. TRIM14_10 TRIM14_10 9 1 - 1.000 - - - - - - -
69. atad1b ENSDARG00000056609 40 1 - 1.000 - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
70. CABZ01073380.1 CABZ01073380.1 5 1 - 1.000 - - - - - - -
71. myh11a ENSDARG00000009782 80 1 - 1.000 - - - - - - - myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1]
72. si:ch211-11p18.6 ENSDARG00000077068, ENSDARG00000102360 0 1 - 1.000 - - - - - - - si:ch211-11p18.6 [Source:ZFIN;Acc:ZDB-GENE-070912-24]
73. zgc:173652_1 4 1 - 1.000 - - - - - - - zgc:173652
74. SLC41A2_1 SLC41A2_1 69 1 - 1.000 - - - - - - -
75. zgc:92249 14 1 - 1.000 - - - - - - - zgc:92249
76. ampd2 ampd2 6 1 - 1.000 - - - - - - -
77. CT573248.1 ENSDARG00000074029 10 1 - 1.000 - - - - - - -
78. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - 1.000 - - - - - - -
79. si:dkey-2j6.4 si:dkey-2j6.4 0 1 - 1.000 - - - - - - -
80. XYLT2 ENSDARG00000059557 1 1 - 1.000 - - - - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
81. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - 1.000 - - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
82. lrp2b ENSDARG00000007906 23 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
83. AKNA_1 AKNA_1 2 1 - 1.000 - - - - - - -
84. CIT_1 CIT_1 6 1 - 1.000 - - - - - - -
85. fam154b fam154b 2 1 - 1.000 - - - - - - -
86. ENSDARG00000077328 ENSDARG00000077328 1 1 - 1.000 - - - - - - -
87. IL17RA_1 IL17RA_1 39 1 - 1.000 - - - - - - -
88. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - 1.000 - - - - - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
89. BX927064.1 BX927064.1 46 1 - 1.000 - - - - - - -
90. ZNF337_20 ZNF337_20 65 1 - 1.000 - - - - - - -
91. AVPR1A AVPR1A 116 1 - 1.000 - - - - - - -
92. NETO2 121 1 - 1.000 - - - - - - - neuropilin and tolloid like 2, transcript variant X2
93. bai3 bai3 92 1 - 1.000 - - - - - - -
94. AL935174.1 ENSDARG00000109674 18 1 - 1.000 - - - - - - -
95. adamts22 adamts22 79 1 - 1.000 - - - - - - -
96. zgc:173716 9 1 - 1.000 - - - - - - - zgc:173716
97. si:dkey-30f3.2 ENSDARG00000098087 6 1 - - - - - - - - 1.000 si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
98. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 1 - 1.000 - - - - - - - ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
99. CU457819.2 ENSDARG00000105374 8 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
100. arhgef19 ENSDARG00000078853 17 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]

There are 614 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA