Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-153k10.9

Gene Name Gene ID Reads Annotation
si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]










Genes with expression patterns similar to si:dkey-153k10.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
2. gad2 ENSDARG00000015537 724 2.683 0.889 0.930 - - - - - - 0.864 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
3. jph3 ENSDARG00000102204 175 2.667 - 0.943 - - - - 0.743 - 0.981 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
4. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.545 - 0.943 - - - 0.764 - - 0.838 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
5. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.438 - 0.904 - - - 0.830 0.704 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
6. slc18a3a ENSDARG00000006356 1285 2.394 0.752 0.804 - - - 0.838 - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
7. irx5a ENSDARG00000034043 1694 2.39 - - - - - 0.734 0.744 - 0.912 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
8. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.38 0.728 - - - - 0.809 - - 0.843 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
9. xpr1 xpr1 840 2.37 - 0.730 - - - 0.803 - - 0.837
10. stmn2a ENSDARG00000033234 2272 2.327 - 0.742 - - - 0.817 - - 0.768 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
11. CHL1 CHL1 1553 2.311 0.706 0.785 - - - - - - 0.820
12. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.219 0.731 0.700 - - - 0.788 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
13. CABZ01054405.1 CABZ01054405.1 115 1.927 - 0.943 - - - - - - 0.984
14. pif1 ENSDARG00000020289 216 1.924 - 0.943 - - - - - - 0.981 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
15. TRIP10 TRIP10 1079 1.88 - - - - - - - 0.930 0.950
16. sema4ab ENSDARG00000062352 409 1.856 - 0.873 - - - - - - 0.983 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
17. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.845 - - - - - - - 0.921 0.924 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
18. trim16 ENSDARG00000010673 519 1.818 - - - - - - - 0.847 0.971 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
19. gpr143 ENSDARG00000034572 559 1.809 - - - - - - - 0.831 0.978 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
20. sdad1 ENSDARG00000105117 2819 1.806 - - - - - - - 0.866 0.940 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
21. CR678040.1 CR678040.1 117 1.801 - 0.816 - - - - - - 0.985
22. nrxn3b ENSDARG00000062693 192 1.796 - 0.816 - - - - - - 0.980 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
23. pdcd11 ENSDARG00000052480 2791 1.79 - - - - - - - 0.904 0.886 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
24. lingo1a ENSDARG00000034165 179 1.789 - 0.943 - - - 0.846 - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
25. caly ENSDARG00000036008 1002 1.785 - - - - - 0.856 - - 0.929 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
26. rap2ip rap2ip 681 1.785 - 0.945 - - - 0.840 - - -
27. ikbkb ENSDARG00000079123 498 1.782 - - - - - - - 0.835 0.947 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
28. TUBB2A TUBB2A 142 1.774 - 0.943 - - - 0.831 - - -
29. stmn4 ENSDARG00000030106 518 1.77 - - - - - 0.795 - 0.975 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
30. neflb ENSDARG00000012426 298 1.762 - 0.943 - - - 0.819 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
31. nrxn2a ENSDARG00000061454 291 1.762 - 0.948 - - - 0.814 - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
32. efna5a ENSDARG00000089790 1007 1.76 - - - - - - - 0.837 0.923 ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
33. slc17a6b ENSDARG00000041150 823 1.758 - 0.943 - - - 0.815 - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
34. ubl3b ENSDARG00000021556 1210 1.756 - - - - - - - 0.825 0.931 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
35. st8sia2 ENSDARG00000018788 2183 1.753 - - - - - 0.833 - - 0.920 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
36. yjefn3 ENSDARG00000061692 211 1.746 - 0.943 - - - 0.803 - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
37. pdlim5a ENSDARG00000101777 357 1.737 - - - - - 0.817 - - 0.920 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
38. pkd2l1 ENSDARG00000022503 372 1.736 0.832 0.904 - - - - - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
39. daxx ENSDARG00000000729 734 1.735 - - - - - 0.778 - - 0.957 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
40. her3 ENSDARG00000076857 131 1.735 - 0.943 - - - 0.792 - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
41. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.735 - - - - - - 0.761 - 0.974 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
42. nadl1.2 695 1.734 - - - - - 0.830 - - 0.904 neural adhesion molecule L1.2, transcript variant X1
43. syt11a ENSDARG00000057913 1145 1.731 - 0.878 - - - 0.853 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
44. scrt2 ENSDARG00000056175 4331 1.73 - 0.958 - - - 0.772 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
45. sox12 ENSDARG00000025847 681 1.729 - 0.943 - - - - - - 0.786 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
46. NPAS3 ENSDARG00000109820 362 1.725 - 0.943 - - - - 0.782 - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
47. st8sia5 ENSDARG00000036584 529 1.723 - - - - - 0.738 - - 0.985 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
48. phactr4b ENSDARG00000032221 1389 1.723 - 0.756 - - - - - 0.967 - phosphatase and actin regulator 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1131]
49. isl1 ENSDARG00000004023 981 1.718 0.791 - - - - 0.927 - - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
50. nrsn1 ENSDARG00000111235 123 1.712 - 0.917 - - - 0.795 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
51. atl1 ENSDARG00000060481 251 1.711 - - - - - 0.760 - 0.951 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
52. MAP6 MAP6 643 1.709 - 0.866 - - - 0.843 - - -
53. olig2 ENSDARG00000040946 1405 1.705 0.766 - - - - - - - 0.939 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
54. si:ch211-133l11.10 ENSDARG00000005626 381 1.703 - - - - - 0.726 - - 0.977 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
55. cenpk ENSDARG00000039616 744 1.697 - - - - - 0.717 - - 0.980 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
56. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.689 - - - - - - - 0.769 0.920 StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
57. espn ENSDARG00000076414 343 1.688 0.755 0.933 - - - - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
58. ttc9b ENSDARG00000068421 251 1.685 - 0.851 - - - 0.834 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
59. ncam2 ENSDARG00000017466 175 1.685 - - - - - - 0.702 - 0.983 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
60. tmem91 ENSDARG00000068456 81 1.684 - 0.943 - - - 0.741 - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
61. ndst2b ENSDARG00000060678 453 1.684 - - - - - - - 0.712 0.972 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
62. sez6l2 ENSDARG00000076052 360 1.682 - 0.945 - - - 0.737 - - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
63. CT025910.1 CT025910.1 143 1.678 - 0.943 - - - 0.735 - - -
64. rereb ENSDARG00000075670 136 1.678 0.735 0.943 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
65. mafb ENSDARG00000076520 139 1.675 0.780 - - - - - 0.895 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
66. gad1b ENSDARG00000027419 440 1.672 0.722 - - - - - - - 0.950 glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
67. smad3b ENSDARG00000010207 951 1.671 - - - - - 0.952 0.719 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
68. mex3b ENSDARG00000058369 1867 1.669 - - - - - 0.783 - - 0.886 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
69. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.667 - 0.785 - - - 0.882 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
70. zgc:113531 ENSDARG00000038794 2063 1.667 0.831 - - - - 0.836 - - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
71. KCNS3 KCNS3 82 1.666 - 0.943 - - - 0.723 - - -
72. mir10d-1 mir10d-1 860 1.665 - 0.806 - - - 0.859 - - -
73. cpsf1 ENSDARG00000034178 2036 1.664 - - - - - 0.805 - - 0.859 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
74. kif18a ENSDARG00000008022 546 1.661 - - - - - 0.722 - - 0.939 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
75. SV2B SV2B 208 1.659 - 0.913 - - - 0.746 - - -
76. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.657 0.702 - - - - - - - 0.955 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
77. pspc1 ENSDARG00000006621 966 1.657 - - - - - 0.761 - - 0.896 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
78. rbfox3 rbfox3 1443 1.654 - 0.776 - - - - - - 0.878
79. atxn1b ENSDARG00000060862 345 1.653 - 0.943 - - - 0.710 - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
80. urp2 ENSDARG00000067781 85 1.652 0.769 0.883 - - - - - - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
81. NPPC ENSDARG00000068126 45 1.652 0.709 0.943 - - - - - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
82. FUT9 FUT9 91 1.652 - 0.943 - - - - 0.709 - -
83. phf10 ENSDARG00000070084 1210 1.652 - - - - - 0.712 - - 0.940 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
84. MAP1A MAP1A 847 1.651 - 0.872 - - - 0.779 - - -
85. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.651 - 0.943 - - - - 0.708 - -
86. fam219ab ENSDARG00000013813 591 1.643 - 0.943 - - - 0.700 - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
87. pou3f3a ENSDARG00000042032 2835 1.642 - - - - - 0.734 - 0.908 - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
88. nes ENSDARG00000088805 2710 1.642 - 0.844 - - - 0.798 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
89. ADAMTS3 ENSDARG00000060127 2839 1.638 0.820 - - - - 0.818 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
90. BX088708.1 BX088708.1 6503 1.638 - 0.734 - - - - - - 0.904
91. arhgef4 ENSDARG00000012914 1464 1.634 - - - - - - - 0.786 0.848 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
92. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.634 - - - - - - 0.721 - 0.913 polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
93. ksr2 ENSDARG00000094526 134 1.631 - 0.926 - - - 0.705 - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
94. amph ENSDARG00000007663 599 1.626 - 0.913 - - - 0.713 - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
95. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.623 0.794 - - - - 0.829 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
96. ppt2 ENSDARG00000104542 888 1.623 - - - - - 0.721 - - 0.902 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
97. dtnbb ENSDARG00000013020 280 1.622 - 0.901 - - - 0.721 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
98. hnrnpa3 ENSDARG00000059351 453 1.615 0.762 - - - - - - 0.853 - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
99. eps15l1a ENSDARG00000042670 1565 1.614 - - - - - - - 0.731 0.883 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
100. pcdh18a ENSDARG00000089805 1096 1.608 - - - - - 0.793 - - 0.815 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]

There are 1881 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA