Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-150k17.3

Gene Name Gene ID Reads Annotation
si:dkey-150k17.3 33 si:dkey-150k17.3










Genes with expression patterns similar to si:dkey-150k17.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-150k17.3 33 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 si:dkey-150k17.3
2. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.962 1.000 0.962 - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
3. lrch4 ENSDARG00000068258 24 1.962 1.000 0.962 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
4. BX537137.1 ENSDARG00000092436 77 1.946 - 0.962 - - - 0.984 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
5. iqsec3b ENSDARG00000093091 10 1.883 1.000 - - - 0.883 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
6. CRFA31.2 CRFA31.2 12 1.869 - 0.869 - - - - - 1.000 -
7. CABZ01073740.1 CABZ01073740.1 27 1.859 - - - - 0.867 0.992 - - -
8. dync1i2b ENSDARG00000103195 46 1.85 1.000 0.850 - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
9. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.849 - 0.886 - - - 0.963 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
10. hsdl1 ENSDARG00000041736 171 1.837 - 0.935 - - - 0.902 - - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
11. LRFN2_1 LRFN2_1 17 1.822 1.000 - - - - - - 0.822 -
12. si:busm1-180g5.7 si:busm1-180g5.7 15 1.819 - - - - 0.819 - - 1.000 -
13. cx32.3 ENSDARG00000041787 33 1.819 - 0.962 - - - - - 0.857 - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
14. esyt1a ENSDARG00000034714 129 1.815 - 0.933 - - - 0.882 - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
15. tmprss13b ENSDARG00000077573 47 1.8 - 0.862 - - - 0.938 - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
16. CU467646.3 ENSDARG00000099076 36 1.797 - 0.901 - - - - - 0.896 - mucin-2-like [Source:NCBI gene;Acc:108179180]
17. PLCXD1_2 PLCXD1_2 9 1.796 - 0.962 - - 0.834 - - - -
18. fam151a ENSDARG00000058218 40 1.793 - 0.947 - - - 0.846 - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
19. zgc:101731 ENSDARG00000040965 27 1.792 1.000 - - - 0.792 - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
20. xkr8.1 ENSDARG00000004498 18 1.747 1.000 - - - 0.747 - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
21. kcnk1a ENSDARG00000045067 743 1.746 - 0.816 - - - 0.930 - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
22. C2CD3 ENSDARG00000074137 51 1.732 0.802 - - - - 0.930 - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
23. CSMD1 CSMD1 15 1.729 1.000 - 0.729 - - - - - -
24. csdc2b 82 1.729 0.795 0.934 - - - - - - - cold shock domain containing C2, RNA binding b
25. vegfab ENSDARG00000034700 366 1.727 0.791 0.936 - - - - - - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
26. TOP1 ENSDARG00000086775 48 1.719 - - - - 0.834 0.885 - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
27. CREB3L4 1085 1.717 - 0.885 - - - 0.832 - - - cAMP responsive element binding protein 3-like 4
28. tnfrsf1b ENSDARG00000070165 467 1.716 - 0.837 - - - 0.879 - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
29. nek4 ENSDARG00000040152 147 1.705 0.779 - - - - 0.926 - - - NIMA-related kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1392]
30. CU856237.1 CU856237.1 153 1.695 - 0.793 - - - 0.902 - - -
31. drd4a ENSDARG00000038363 82 1.689 0.737 - - - - 0.952 - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
32. rcbtb1 ENSDARG00000036645 255 1.683 - 0.866 - - - 0.817 - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
33. si:ch211-225b11.1 ENSDARG00000002405 172 1.677 - 0.782 - - - 0.895 - - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
34. htr3a ENSDARG00000089212 51 1.671 0.837 - - - 0.834 - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
35. ZNF784_1 ZNF784_1 155 1.669 - 0.886 - - - 0.783 - - -
36. myo7aa ENSDARG00000099871 23 1.661 0.927 0.734 - - - - - - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
37. im:6904045 ENSDARG00000115174 179 1.66 - 0.932 - - - 0.728 - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
38. ctskl ctskl 17 1.653 - - - - 0.851 - - 0.802 -
39. hoxd13a ENSDARG00000059256 1190 1.653 - 0.773 - - - 0.880 - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
40. strumpellin 212 1.646 - 0.830 - - - 0.816 - - - strumpellin
41. CR478286.1_1 CR478286.1_1 306 1.63 0.765 0.865 - - - - - - -
42. rbfox3l rbfox3l 34 1.612 0.791 - - - 0.821 - - - -
43. rhbdd1 ENSDARG00000021046 120 1.607 - 0.729 - - - 0.878 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
44. PTGER3 ENSDARG00000055781 187 1.581 0.789 0.792 - - - - - - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
45. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.58 0.872 0.708 - - - - - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
46. fbxl3b ENSDARG00000021882 58 1.529 0.799 - - - - 0.730 - - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
47. zdhhc16b ENSDARG00000015989 193 1.515 - 0.727 - - - 0.788 - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
48. acsl3a ENSDARG00000032079 897 1.513 - 0.765 - - - 0.748 - - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
49. arsh ENSDARG00000002299 331 1.511 - 0.792 - - - 0.719 - - - arylsulfatase H [Source:ZFIN;Acc:ZDB-GENE-081104-120]
50. ptger1b ENSDARG00000104847 91 1.508 - 0.723 - - - 0.785 - - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
51. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 1.496 0.747 - - - 0.749 - - - - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
52. insm1b ENSDARG00000053301 2032 1.486 - 0.773 0.713 - - - - - - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
53. ripply1 ENSDARG00000054103 367 1.467 - 0.754 - - - 0.713 - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
54. zgc:66014 817 1.43 - 0.720 - - - 0.710 - - - zgc:66014, transcript variant X6
55. alg14 ENSDARG00000103093, ENSDARG00000114160, ENSDARG00000116808 95 1.406 - 0.700 - - - 0.706 - - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-041010-195]
56. sema7a ENSDARG00000078707 70 1 1.000 - - - - - - - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
57. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
58. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
59. prf1.7 1 1 - - - - - - - 1.000 - perforin 1.7
60. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
61. CABZ01084273.1 CABZ01084273.1 16 1 1.000 - - - - - - - -
62. kcng4 kcng4 37 1 1.000 - - - - - - - -
63. oaz2b ENSDARG00000059815 38 1 - - - - - 1.000 - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
64. DIP2B DIP2B 18 1 1.000 - - - - - - - -
65. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
66. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
67. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
68. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
69. si:dkey-207m2.4 ENSDARG00000089831, ENSDARG00000100654 3 1 1.000 - - - - - - - - si:dkey-207m2.4 [Source:ZFIN;Acc:ZDB-GENE-081103-58]
70. rccd1_1 ENSDARG00000071074 24 1 1.000 - - - - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
71. wfikkn1 ENSDARG00000101364 11 1 1.000 - - - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
72. CABZ01065506.1 CABZ01065506.1 204 1 1.000 - - - - - - - -
73. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
74. ARHGAP18 ENSDARG00000074740 4 1 - - - - - - - 1.000 - Rho GTPase activating protein 18 [Source:ZFIN;Acc:ZDB-GENE-070502-1]
75. si:ch211-260b17.5 2 1 - - - - - - - 1.000 - si:ch211-260b17.5
76. chrm4a ENSDARG00000069254 32 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
77. FAM160A1 FAM160A1 1 1 - - - - - - - 1.000 -
78. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
79. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
80. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
81. ZNF784_2 ZNF784_2 181 1 1.000 - - - - - - - -
82. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
83. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
84. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
85. zgc:174260 ENSDARG00000091800, ENSDARG00000116307 10 1 - - - - - - - 1.000 - zgc:174260 [Source:ZFIN;Acc:ZDB-GENE-080213-9]
86. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
87. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
88. C8H9orf172 C8H9orf172 113 1 1.000 - - - - - - - -
89. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
90. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
91. WDR49 WDR49 6 1 - - - - - - - 1.000 -
92. si:ch211-215c18.3 ENSDARG00000095308 11 1 1.000 - - - - - - - - si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
93. ENSDARG00000096199 ENSDARG00000096199 15 1 1.000 - - - - - - - -
94. lppr4a lppr4a 141 1 1.000 - - - - - - - -
95. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
96. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
97. BICD1 BICD1 9 1 1.000 - - - - - - - -
98. si:dkey-31k12.2 si:dkey-31k12.2 1 1 - - - - - - - 1.000 -
99. U6_30 U6_30 1 1 1.000 - - - - - - - -
100. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]

There are 1330 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA