Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-150k17.2

Gene Name Gene ID Reads Annotation
si:dkey-150k17.2 si:dkey-150k17.2 40










Genes with expression patterns similar to si:dkey-150k17.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-150k17.2 si:dkey-150k17.2 40 7 - 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000
2. zgc:110353 ENSDARG00000039443 80 1.976 - - - - - 0.976 1.000 - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
3. pax4 ENSDARG00000021336 29 1.931 - - - - 0.931 - 1.000 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
4. ccrl1a ccrl1a 40 1.903 - 0.972 - - 0.931 - - - -
5. tg ENSDARG00000020084 40 1.871 - 0.871 - - - - 1.000 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
6. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1.839 - 0.839 - - - - 1.000 - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
7. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.713 - - - - - - 1.000 0.713 - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
8. CABZ01078515.1 CABZ01078515.1 25 1.711 - - - - - 0.711 1.000 - -
9. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 1.702 - 0.754 - - 0.948 - - - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
10. GFOD1 ENSDARG00000061363 67 1.686 - 0.973 - - 0.713 - - - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
11. zgc:112001 ENSDARG00000078034 93 1.684 - - - - 0.923 - 0.761 - - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
12. gucy1a3 89 1.666 - 0.774 - - - - 0.892 - - guanylate cyclase 1, soluble, alpha 3
13. ppp1r37 ENSDARG00000078458 49 1.643 - 0.932 - - - 0.711 - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
14. sema3ga ENSDARG00000042545 1603 1.612 - 0.846 - - - 0.766 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
15. BAIAP2 BAIAP2 88 1.603 - 0.831 - - - - 0.772 - -
16. josd2 ENSDARG00000057626, ENSDARG00000111978 273 1.574 - 0.771 - - - 0.803 - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
17. snip1 ENSDARG00000087528 275 1.566 - 0.749 - - - 0.817 - - - Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
18. hcrtr2 ENSDARG00000023722 70 1.543 - - - - - 0.771 0.772 - - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
19. si:dkey-253d23.9 ENSDARG00000074820 24 1.534 - 0.768 - - - - 0.766 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
20. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - - - - - 1.000 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
21. mcph1 ENSDARG00000058372 51 1 - - - - - - 1.000 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
22. v2ra20 ENSDARG00000094862 0 1 - - - - - - 1.000 - - vomeronasal 2 receptor, a20 [Source:ZFIN;Acc:ZDB-GENE-050419-220]
23. ube2l3b ENSDARG00000027141 26 1 - 1.000 - - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
24. igsf5 igsf5 85 1 - - - - - - 1.000 - -
25. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 - - - - - - 1.000 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
26. FCF1 ENSDARG00000102333 59 1 - - - - - - 1.000 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
27. wbscr27 wbscr27 70 1 - - - - - - 1.000 - -
28. prf1.5 ENSDARG00000037598, ENSDARG00000113302 3 1 - - - - - - 1.000 - - perforin 1.5 [Source:ZFIN;Acc:ZDB-GENE-081105-3]
29. ei24 ENSDARG00000053840 78 1 - - - - - - 1.000 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
30. si:ch211-229c8.4 ENSDARG00000056154 1 1 - - - - - - 1.000 - - si:ch211-229c8.4 [Source:ZFIN;Acc:ZDB-GENE-050419-129]
31. elmod3 ENSDARG00000074742 6 1 - - - - - - 1.000 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
32. wu:fb37b09 wu:fb37b09 10685 1 - - - - - - 1.000 - -
33. zgc:101731 ENSDARG00000040965 27 1 - - - - - - 1.000 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
34. CR382327.1 ENSDARG00000088739 56 1 - - - - - - 1.000 - -
35. pappab ENSDARG00000059858 11 1 - - - - - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
36. zeb2b ENSDARG00000078416 23 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
37. zgc:173702_1 ENSDARG00000110229 24 1 - - - - - - 1.000 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
38. fam207a_1 ENSDARG00000071500 1 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
39. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - - - 1.000 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
40. cd44a ENSDARG00000087863 4 1 - - - - - - 1.000 - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
41. NAGK ENSDARG00000099116 6 1 - - - - - - 1.000 - - N-acetylglucosamine kinase [Source:ZFIN;Acc:ZDB-GENE-070928-19]
42. ptgdsb.2 ENSDARG00000071626 105 1 - 1.000 - - - - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
43. PEG3_35 PEG3_35 52 1 - - - - - - 1.000 - -
44. st8sia3 ENSDARG00000045301 3 1 - - - - - - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
45. arf3a ENSDARG00000070539 29 1 - - - - - - 1.000 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
46. CU638737.1 CU638737.1 17 1 - - - - - 1.000 - - -
47. kif17 ENSDARG00000055238 12 1 - - - - - - 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
48. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - - 1.000 - -
49. foxm1 ENSDARG00000003200 8 1 - - - - - - 1.000 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
50. zgc:110434 21 1 - - - - - - 1.000 - - zgc:110434
51. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - - 1.000 - -
52. rhoab ENSDARG00000094673 26 1 - - - - - - 1.000 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
53. GPR116 GPR116 1 1 - - - - - - 1.000 - -
54. lars2 ENSDARG00000075337 31 1 - - - - - - 1.000 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
55. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - - - - - - 1.000 - -
56. brinp3b ENSDARG00000075352 14 1 - - - - - - 1.000 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
57. znf423 ENSDARG00000095732 13 1 - - - - - - 1.000 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
58. ZSWIM2 ENSDARG00000075700 8 1 - - - - - - 1.000 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
59. barx1 ENSDARG00000007407 344 1 - - - - - - 1.000 - - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
60. acoxl ENSDARG00000020149 14 1 - - - - - - 1.000 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
61. wu:fb63a08 38 1 - - - - - - 1.000 - - wu:fb63a08
62. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - 1.000 - -
63. EXD1 ENSDARG00000098669 27 1 - - - - - - 1.000 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
64. mapkap1 ENSDARG00000091777 8 1 - - - - - - 1.000 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
65. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - - - - 1.000 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
66. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
67. PRICKLE2 PRICKLE2 69 1 - - - - - - 1.000 - -
68. tmem179b ENSDARG00000069495 17 1 - - - - - - 1.000 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
69. KIF21B ENSDARG00000009733 53 1 - - - - - - 1.000 - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
70. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 - - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
71. gpsm1a ENSDARG00000092517 784 1 - - - - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
72. si:ch211-213i16.4 8 1 - - - - - - 1.000 - - si:ch211-213i16.4, transcript variant X1
73. si:ch211-113a14.26_4 31 1 - - - - - - 1.000 - - si:ch211-113a14.26
74. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - 1.000 - -
75. BX649394.1 BX649394.1 1 1 - - - - - - 1.000 - -
76. si:dkey-27c15.3 ENSDARG00000056847 37 1 - - - - - - 1.000 - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
77. cplx4a ENSDARG00000059978 6 1 - - - - - - 1.000 - - complexin 4a [Source:ZFIN;Acc:ZDB-GENE-060526-116]
78. EGR4_1 EGR4_1 14 1 - - - - - - 1.000 - -
79. numbl ENSDARG00000101949, ENSDARG00000112946 87 1 - - - - - - 1.000 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
80. BX897671.1 BX897671.1 10 1 - - - - - - 1.000 - -
81. sst3 61 1 - - - - - - 1.000 - - somatostatin 3
82. CU633848.1 CU633848.1 4 1 - - - - - - 1.000 - -
83. zdhhc12b ENSDARG00000052787 43 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
84. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
85. ppp1r37_1 ENSDARG00000078458 36 1 - - - - - - 1.000 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
86. ENSDARG00000086640 ENSDARG00000086640 3 1 - - - - - - 1.000 - -
87. zgc:114041 ENSDARG00000052109 76 1 - - - - - - 1.000 - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
88. CR847847.1 CR847847.1 0 1 - - - - - - 1.000 - -
89. SCAMP5 SCAMP5 19 1 - - - - - - 1.000 - -
90. baiap2l2 baiap2l2 30 1 - - - - - - 1.000 - -
91. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1 - - - - - - 1.000 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
92. FAM150A 14 1 - - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
93. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - 1.000 - -
94. GPC5 GPC5 11 1 - - - - - - 1.000 - -
95. zgc:153345 ENSDARG00000055622 29 1 - - - - - - 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
96. fam151a ENSDARG00000058218 40 1 - 1.000 - - - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
97. URB1 ENSDARG00000060308 78 1 - - - - - - 1.000 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
98. GPR32 GPR32 0 1 - - - - - - 1.000 - -
99. BX004785.2 ENSDARG00000093487 10 1 - - - - - - 1.000 - -
100. CR318653.1 ENSDARG00000104557 29 1 - - - - - - 1.000 - -

There are 869 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA