Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-13d5.1

Gene Name Gene ID Reads Annotation
si:dkey-13d5.1 si:dkey-13d5.1 3










Genes with expression patterns similar to si:dkey-13d5.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-13d5.1 si:dkey-13d5.1 3 5 1.000 1.000 1.000 - - 1.000 - - 1.000
2. crispld1a ENSDARG00000077275 7 2 - 1.000 1.000 - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
3. CABZ01088933.1 CABZ01088933.1 40 2 - 1.000 - - - 1.000 - - -
4. ccdc14 ENSDARG00000098734 3 2 - 1.000 - - - - - - 1.000 coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
5. slc7a14b ENSDARG00000079231 6 2 - 1.000 1.000 - - - - - - solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
6. si:ch211-207c6.4 si:ch211-207c6.4 7 2 - 1.000 1.000 - - - - - -
7. SRCIN1 SRCIN1 5 2 - 1.000 1.000 - - - - - -
8. si:dkey-89j23.3 si:dkey-89j23.3 9 2 - - 1.000 - - 1.000 - - -
9. si:dkey-4c15.6 si:dkey-4c15.6 6 1.958 0.958 - - - - - - - 1.000
10. si:dkey-11d20.4 si:dkey-11d20.4 6 1.902 0.902 - 1.000 - - - - - -
11. si:ch211-286b5.9 ENSDARG00000086166 27 1.892 - 1.000 - - - 0.892 - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
12. txlng ENSDARG00000001969 7 1.873 - - - - - 0.873 - - 1.000 taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
13. sc:d136 sc:d136 2 1.873 - 1.000 - - - 0.873 - - -
14. rtn4rl2b ENSDARG00000037495 11 1.873 1.000 - - - - 0.873 - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
15. BX323882.1 ENSDARG00000101656 2 1.873 - - - - - 0.873 - - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
16. cyp46a4 cyp46a4 5 1.873 - 1.000 - - - 0.873 - - -
17. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1.854 1.000 - - - - 0.854 - - -
18. si:dkey-15h8.7 si:dkey-15h8.7 43 1.831 0.958 - - - - 0.873 - - -
19. PEG3_35 PEG3_35 52 1.831 0.958 - - - - 0.873 - - -
20. zte25 zte25 29 1.801 0.801 - - - - 1.000 - - -
21. si:rp71-7l19.6 si:rp71-7l19.6 12 1.764 1.000 - 0.764 - - - - - -
22. DYNC1H1 ENSDARG00000014717 11 1.733 - - 0.733 - - - - - 1.000 dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
23. CACNA2D1 ENSDARG00000073752 6 1.733 - 1.000 - - - - - - 0.733 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
24. pmelb ENSDARG00000033760 206 1.716 0.945 - - - - 0.771 - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
25. OSCP1 ENSDARG00000101888 59 1.712 1.000 - - - - 0.712 - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
26. drc1 ENSDARG00000042182 39 1.642 0.769 - - - - 0.873 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
27. rrnad1 ENSDARG00000089033 69 1.636 0.817 - - - - 0.819 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
28. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
29. abcc6a ENSDARG00000016750 10 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
30. gucy1b3 92 1 - 1.000 - - - - - - - guanylate cyclase 1, soluble, beta 3
31. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
32. dnajc5b ENSDARG00000058147 6 1 - - 1.000 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
33. FMN1 ENSDARG00000011975 2 1 - - 1.000 - - - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
34. OTUD7A ENSDARG00000045556 1 1 - - 1.000 - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
35. neu3.1 ENSDARG00000096382 9 1 - - - - - - - - 1.000 sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
36. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
37. LRCH4 ENSDARG00000068258 22 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
38. TRIM35_12 TRIM35_12 2 1 - - - - - - - - 1.000
39. myo5b_1 ENSDARG00000062003 6 1 1.000 - - - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
40. nkiras2_1 ENSDARG00000052594 31 1 - 1.000 - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
41. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
42. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
43. BX927318.2 BX927318.2 5 1 - - 1.000 - - - - - -
44. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
45. AL929092.3 AL929092.3 0 1 - - 1.000 - - - - - -
46. si:ch211-168h21.3 10 1 - - - - - - - - 1.000 si:ch211-168h21.3
47. BRSK2_2 BRSK2_2 3 1 - - - - - - - - 1.000
48. mn1a ENSDARG00000076529 4 1 1.000 - - - - - - - - meningioma 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4968]
49. zgc:174224 ENSDARG00000093875 4 1 - - - - - - - - 1.000 zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
50. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
51. si:dkey-166k12.1 ENSDARG00000054690 0 1 - - - - - - - - 1.000 si:dkey-166k12.1 [Source:ZFIN;Acc:ZDB-GENE-120215-78]
52. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - - - - 1.000 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
53. si:ch211-122l24.4 si:ch211-122l24.4 41 1 - 1.000 - - - - - - -
54. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - - - - - - - - 1.000
55. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
56. C6H3orf18 C6H3orf18 7 1 - - - - - - - - 1.000
57. BX511066.3 BX511066.3 1 1 - - - - - - - - 1.000
58. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
59. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
60. UHRF2_1 UHRF2_1 2 1 - - - - - - - - 1.000
61. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
62. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
63. NPTN_1 NPTN_1 0 1 - - - - - - - - 1.000
64. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - 1.000 - - - - - - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
65. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - 1.000 - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
66. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
67. BX571760.2 BX571760.2 1 1 - - - - - - - - 1.000
68. U6_23 U6_23 0 1 - 1.000 - - - - - - -
69. si:ch211-38m6.6 ENSDARG00000076959 12 1 - 1.000 - - - - - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
70. BX004964.1 ENSDARG00000097134 1 1 - - - - - - - - 1.000
71. si:ch211-262n1.5 12 1 - - 1.000 - - - - - - si:ch211-262n1.5
72. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
73. si:ch211-160d14.9 8 1 - - - - - - - - 1.000 si:ch211-160d14.9, transcript variant X1
74. NCAM2 ENSDARG00000098523 2 1 - - 1.000 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
75. clec3ba ENSDARG00000076541 3 1 - - 1.000 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
76. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
77. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
78. FYB FYB 3 1 - - - - - - - - 1.000
79. map2k4a ENSDARG00000063583 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
80. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
81. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
82. CABZ01044085.1 CABZ01044085.1 3 1 - - - - - - - - 1.000
83. FBXO16 ENSDARG00000033949 10 1 1.000 - - - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
84. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
85. ascc2 ENSDARG00000013058 228 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
86. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 - - 1.000 - - - - - - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
87. si:rp71-26b20.1 si:rp71-26b20.1 11 1 1.000 - - - - - - - -
88. TGM1 ENSDARG00000017799 3 1 - 1.000 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
89. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
90. lrguk ENSDARG00000069698 5 1 - - - - - 1.000 - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
91. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
92. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
93. prg4a ENSDARG00000010482 10 1 - - 1.000 - - - - - - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
94. si:dkey-14o1.14 si:dkey-14o1.14 142 1 1.000 - - - - - - - -
95. U6_20 U6_20 0 1 - 1.000 - - - - - - -
96. BX088603.2 ENSDARG00000099595 2 1 - - 1.000 - - - - - -
97. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
98. CR387932.1 ENSDARG00000097344 2 1 - 1.000 - - - - - - -
99. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - - - - - - 1.000 si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
100. htr3a ENSDARG00000089212 51 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]

There are 1159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA