Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-13d5.1

Gene Name Gene ID Reads Annotation
si:dkey-13d5.1 si:dkey-13d5.1 3










Genes with expression patterns similar to si:dkey-13d5.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-13d5.1 si:dkey-13d5.1 3 5 1.000 1.000 1.000 - - 1.000 - - 1.000
2. slc7a14b ENSDARG00000079231 6 2 - 1.000 1.000 - - - - - - solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
3. CABZ01088933.1 CABZ01088933.1 40 2 - 1.000 - - - 1.000 - - -
4. crispld1a ENSDARG00000077275 7 2 - 1.000 1.000 - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
5. si:ch211-207c6.4 si:ch211-207c6.4 7 2 - 1.000 1.000 - - - - - -
6. si:dkey-89j23.3 si:dkey-89j23.3 9 2 - - 1.000 - - 1.000 - - -
7. SRCIN1 SRCIN1 5 2 - 1.000 1.000 - - - - - -
8. ccdc14 ENSDARG00000098734 3 2 - 1.000 - - - - - - 1.000 coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
9. si:dkey-4c15.6 si:dkey-4c15.6 6 1.958 0.958 - - - - - - - 1.000
10. si:dkey-11d20.4 si:dkey-11d20.4 6 1.902 0.902 - 1.000 - - - - - -
11. si:ch211-286b5.9 ENSDARG00000086166 27 1.892 - 1.000 - - - 0.892 - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
12. cyp46a4 cyp46a4 5 1.873 - 1.000 - - - 0.873 - - -
13. txlng ENSDARG00000001969 7 1.873 - - - - - 0.873 - - 1.000 taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
14. sc:d136 sc:d136 2 1.873 - 1.000 - - - 0.873 - - -
15. BX323882.1 ENSDARG00000101656 2 1.873 - - - - - 0.873 - - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
16. rtn4rl2b ENSDARG00000037495 11 1.873 1.000 - - - - 0.873 - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
17. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1.854 1.000 - - - - 0.854 - - -
18. PEG3_35 PEG3_35 52 1.831 0.958 - - - - 0.873 - - -
19. si:dkey-15h8.7 si:dkey-15h8.7 43 1.831 0.958 - - - - 0.873 - - -
20. zte25 zte25 29 1.801 0.801 - - - - 1.000 - - -
21. si:rp71-7l19.6 si:rp71-7l19.6 12 1.764 1.000 - 0.764 - - - - - -
22. DYNC1H1 ENSDARG00000014717 11 1.733 - - 0.733 - - - - - 1.000 dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
23. CACNA2D1 ENSDARG00000073752 6 1.733 - 1.000 - - - - - - 0.733 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
24. pmelb ENSDARG00000033760 206 1.716 0.945 - - - - 0.771 - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
25. OSCP1 ENSDARG00000101888 59 1.712 1.000 - - - - 0.712 - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
26. drc1 ENSDARG00000042182 39 1.642 0.769 - - - - 0.873 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
27. rrnad1 ENSDARG00000089033 69 1.636 0.817 - - - - 0.819 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
28. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
29. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
30. PLEKHD1 ENSDARG00000091349 0 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 [Source:ZFIN;Acc:ZDB-GENE-130926-1]
31. sdhaf1 ENSDARG00000092478 51 1 - 1.000 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
32. MON1B MON1B 1 1 - - - - - - - - 1.000
33. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
34. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
35. ARHGAP40 ARHGAP40 2 1 - - - - - - - - 1.000
36. kif17 ENSDARG00000055238 12 1 - 1.000 - - - - - - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
37. wu:fj49c06 wu:fj49c06 0 1 - 1.000 - - - - - - -
38. GPX2 ENSDARG00000089149 10 1 - - 1.000 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
39. USP43 USP43 14 1 - 1.000 - - - - - - -
40. mir142a 20 1 - - - - - - - - 1.000 microRNA 142a
41. si:dkey-166k12.1 ENSDARG00000054690 0 1 - - - - - - - - 1.000 si:dkey-166k12.1 [Source:ZFIN;Acc:ZDB-GENE-120215-78]
42. ush2a ENSDARG00000029482 10 1 - - 1.000 - - - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
43. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - - - - 1.000
44. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
45. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
46. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
47. BX950868.2 ENSDARG00000104423 4 1 - - 1.000 - - - - - -
48. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
49. BX914198.1 BX914198.1 5 1 - - - - - - - - 1.000
50. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1 - 1.000 - - - - - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
51. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
52. CABZ01084613.1 CABZ01084613.1 22 1 - - - - - - - - 1.000
53. NFATC4 ENSDARG00000054162 44 1 - - - - - 1.000 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
54. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
55. KYNU ENSDARG00000099546 55 1 1.000 - - - - - - - - kynureninase [Source:ZFIN;Acc:ZDB-GENE-120215-204]
56. NTRK3 NTRK3 163 1 - 1.000 - - - - - - -
57. asz1 ENSDARG00000004823, ENSDARG00000116151 8 1 - - - - - - - - 1.000 ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-988]
58. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
59. SNORA32 SNORA32 10 1 - - - - - - - - 1.000
60. KCNG2 ENSDARG00000035961 58 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
61. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
62. ctsl.1 ENSDARG00000003902 25 1 - - - - - - - - 1.000 cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
63. ftr19_1 ENSDARG00000094131 1 1 - - - - - - - - 1.000 finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
64. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 - - 1.000 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
65. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - 1.000 - - - - - - -
66. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
67. CR933818.1 CR933818.1 1 1 - - - - - - - - 1.000
68. spp1 ENSDARG00000044276 34 1 1.000 - - - - - - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
69. NAALADL1 NAALADL1 2 1 - - - - - - - - 1.000
70. si:dkeyp-104h9.7 si:dkeyp-104h9.7 0 1 - - 1.000 - - - - - -
71. mir199-2 mir199-2 38 1 1.000 - - - - - - - -
72. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
73. mir184 48 1 - 1.000 - - - - - - - microRNA 184
74. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
75. si:ch211-30g3.4 si:ch211-30g3.4 3 1 - - - - - - - - 1.000
76. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
77. kcnh3 ENSDARG00000069560 4 1 - - - - - - - - 1.000 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
78. 5S_rRNA_27 5S_rRNA_27 2 1 - - 1.000 - - - - - -
79. ZNF557 ZNF557 1 1 - - - - - - - - 1.000
80. zak ENSDARG00000006978, ENSDARG00000044615 80 1 1.000 - - - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
81. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - 1.000 - - - - - - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
82. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
83. CABZ01079541.1 CABZ01079541.1 0 1 - - 1.000 - - - - - -
84. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - 1.000 - - - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
85. si:busm1-180g5.7 si:busm1-180g5.7 15 1 1.000 - - - - - - - -
86. ptk2ba ENSDARG00000022841 19 1 - - - - - 1.000 - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
87. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - 1.000 - - - - - - -
88. gltpb ENSDARG00000077962 5 1 - 1.000 - - - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
89. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - 1.000 - - - - - -
90. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - - - 1.000
91. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
92. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
93. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
94. PDE1A ENSDARG00000060875 0 1 - - - - - - - - 1.000 phosphodiesterase 1A, calmodulin-dependent [Source:ZFIN;Acc:ZDB-GENE-090831-2]
95. crtac1b ENSDARG00000102517 0 1 - - 1.000 - - - - - - cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]
96. CDKN2B CDKN2B 5 1 1.000 - - - - - - - -
97. si:dkey-14o1.14 si:dkey-14o1.14 142 1 1.000 - - - - - - - -
98. ECT2L 39 1 - - - - - 1.000 - - - epithelial cell transforming 2 like, transcript variant X4
99. atxn1b ENSDARG00000060862 345 1 - 1.000 - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
100. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]

There are 1159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA