Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-11e23.3

Gene Name Gene ID Reads Annotation
si:dkey-11e23.3 si:dkey-11e23.3 3










Genes with expression patterns similar to si:dkey-11e23.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-11e23.3 si:dkey-11e23.3 3 5 - - 1.000 1.000 1.000 1.000 - 1.000 -
2. psmb11 psmb11 5 2.929 - - 0.929 - - 1.000 - 1.000 -
3. FAM120B ENSDARG00000030804 1 2 - - 1.000 - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
4. ttc25 ENSDARG00000058140 2 2 - - 1.000 - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
5. si:dkeyp-82a1.2 ENSDARG00000094192 2 2 - - - - 1.000 1.000 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
6. shank3a ENSDARG00000063332 5 2 - - - - - 1.000 - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
7. mxa ENSDARG00000021688 14 1.931 - - - 0.931 1.000 - - - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
8. LRFN4_1 LRFN4_1 5 1.931 - - 1.000 0.931 - - - - -
9. asz1 ENSDARG00000004823, ENSDARG00000116151 8 1.9 - - - 0.923 0.977 - - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-988]
10. pde4d ENSDARG00000032761 8 1.841 - - 0.929 - 0.912 - - - - phosphodiesterase 4D, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-081105-16]
11. xcr1a xcr1a 3 1.745 - - - 0.745 - 1.000 - - -
12. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1.731 - - - - 0.731 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
13. CABZ01063402.1 CABZ01063402.1 64 1.725 - - - - - 1.000 - 0.725 -
14. ARHGEF10L ARHGEF10L 18 1.7 - - - 0.700 - 1.000 - - -
15. TMEM121 TMEM121 4 1.67 - - - 0.931 - 0.739 - - -
16. cyb561a3b ENSDARG00000028257 60 1.622 - - - - 0.778 0.844 - - - cytochrome b561 family, member A3b [Source:ZFIN;Acc:ZDB-GENE-091204-222]
17. sycp1 ENSDARG00000003904 8 1.534 - - 0.780 0.754 - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
18. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
19. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
20. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
21. ccr7 ENSDARG00000044561 2 1 - - - - - 1.000 - - - chemokine (C-C motif) receptor 7 [Source:ZFIN;Acc:ZDB-GENE-060522-2]
22. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - - - - - 1.000 - - -
23. CABZ01059421.1 CABZ01059421.1 1 1 - - 1.000 - - - - - -
24. trpm2_1 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
25. CABZ01031738.1 CABZ01031738.1 1 1 - - 1.000 - - - - - -
26. CYP27A1 CYP27A1 4 1 - - - - - 1.000 - - -
27. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - 1.000 - - - - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
28. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
29. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - - - 1.000 - - -
30. CABZ01044048.1 ENSDARG00000011463 20 1 - - - - - 1.000 - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
31. fgf11b ENSDARG00000043907 16 1 - - - - - 1.000 - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
32. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - - 1.000 - - - - - -
33. si:dkey-234k7.2 si:dkey-234k7.2 4 1 - - - - - 1.000 - - -
34. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
35. CPEB4_1 CPEB4_1 1 1 - - 1.000 - - - - - -
36. fibinb ENSDARG00000087196, ENSDARG00000110737 53 1 - - 1.000 - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
37. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - 1.000 - - - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
38. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
39. ASCC3_1 ASCC3_1 1 1 - - - - 1.000 - - - -
40. dab1b ENSDARG00000003290 7 1 - - - - - 1.000 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
41. rgs9a ENSDARG00000037925 3 1 - - 1.000 - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
42. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
43. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
44. BX571823.1 BX571823.1 2 1 - - 1.000 - - - - - -
45. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
46. allc ENSDARG00000042562 12 1 - - 1.000 - - - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
47. BX927369.2 BX927369.2 9 1 - - 1.000 - - - - - -
48. fars2 ENSDARG00000091247 1 1 - - 1.000 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
49. rbp1b rbp1b 36 1 - - - - - 1.000 - - -
50. crygm2d14 ENSDARG00000087301 66 1 - - - - - 1.000 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
51. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1 - - 1.000 - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
52. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
53. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
54. mir15a-1 36 1 - - - - - 1.000 - - - microRNA 15a-1
55. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - - 1.000 - - -
56. CR388129.1 ENSDARG00000097173 89 1 - - - - - 1.000 - - -
57. ENSDARG00000086653 ENSDARG00000086653 14 1 - - 1.000 - - - - - -
58. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - - - - 1.000 - - - -
59. ncanb ENSDARG00000005783 22 1 - - - - - 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
60. gabbr1a ENSDARG00000018967 2 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
61. CABZ01073654.1 CABZ01073654.1 16 1 - - - - - 1.000 - - -
62. PGF PGF 3 1 - - - - 1.000 - - - -
63. JAKMIP1 ENSDARG00000076090 55 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
64. si:ch211-274p24.3 si:ch211-274p24.3 72 1 - - - - - 1.000 - - -
65. hivep3a ENSDARG00000075928 17 1 - - - - - 1.000 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
66. OSBPL1A ENSDARG00000105147 16 1 - - - - - 1.000 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
67. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
68. zgc:194686 ENSDARG00000076388 1 1 - - - - 1.000 - - - - zgc:194686 [Source:ZFIN;Acc:ZDB-GENE-080721-26]
69. PHKA1 PHKA1 10 1 - - 1.000 - - - - - -
70. map3k12 ENSDARG00000103651 3 1 - - - - 1.000 - - - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
71. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - 1.000 - - - - - -
72. FHL5 ENSDARG00000014805 3 1 - - - - 1.000 - - - - four and a half LIM domains 5 [Source:ZFIN;Acc:ZDB-GENE-040822-3]
73. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - 1.000 - - -
74. RIC3_1 ENSDARG00000105549 2 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
75. TNPO1 ENSDARG00000035390 1 1 - - 1.000 - - - - - - transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
76. CR318629.1 CR318629.1 7 1 - - - - - 1.000 - - -
77. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
78. ighd ENSDARG00000096248 1 1 - - 1.000 - - - - - - immunoglobulin heavy constant delta [Source:ZFIN;Acc:ZDB-GENE-040513-9]
79. CABZ01009626.1 CABZ01009626.1 2 1 - - - - - 1.000 - - -
80. pcsk5a ENSDARG00000067537 44 1 - - 1.000 - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
81. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
82. MYO7B MYO7B 8 1 - - 1.000 - - - - - -
83. CR388164.2 ENSDARG00000096885 1 1 - - 1.000 - - - - - -
84. BX927362.1 ENSDARG00000097469 13 1 - - - - - 1.000 - - -
85. CHST7 ENSDARG00000044341 3 1 - - - - 1.000 - - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:ZFIN;Acc:ZDB-GENE-131121-150]
86. ptgfr ENSDARG00000074016 1 1 - - 1.000 - - - - - - prostaglandin F receptor (FP) [Source:ZFIN;Acc:ZDB-GENE-120919-6]
87. PFKFB1 ENSDARG00000037140 5 1 - - - - 1.000 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
88. THBD ENSDARG00000092470 1 1 - - 1.000 - - - - - - thrombomodulin [Source:ZFIN;Acc:ZDB-GENE-110411-281]
89. HIST1H4J HIST1H4J 31 1 - - - - - 1.000 - - -
90. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - 1.000 - - -
91. si:ch211-255f4.11 ENSDARG00000102099, ENSDARG00000117185 2 1 - - 1.000 - - - - - - si:ch211-255f4.11 [Source:ZFIN;Acc:ZDB-GENE-050208-387]
92. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
93. GABRA3 ENSDARG00000090883 5 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
94. TDRD6 ENSDARG00000070052 1 1 - - - - - 1.000 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
95. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
96. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
97. sh3bp1 ENSDARG00000078119 5 1 - - 1.000 - - - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
98. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
99. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - 1.000 - - -
100. znf804b ENSDARG00000103396 11 1 - - 1.000 - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]

There are 669 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA