Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-115f9.2

Gene Name Gene ID Reads Annotation
si:dkey-115f9.2 si:dkey-115f9.2 18










Genes with expression patterns similar to si:dkey-115f9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-115f9.2 si:dkey-115f9.2 18 5 - - 1.000 - 1.000 1.000 1.000 1.000 -
2. slc6a19b ENSDARG00000056719 140 2 - - - - - 1.000 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
3. NMI 3 2 - - - - - - 1.000 1.000 - N-myc (and STAT) interactor
4. sc:d0139 sc:d0139 233 1.893 - - - - - 0.995 0.898 - -
5. FOLR1 FOLR1 25 1.89 - - 0.890 - - - 1.000 - -
6. USP43 USP43 14 1.857 - - 0.934 - - - 0.923 - -
7. si:rp71-45g20.6 si:rp71-45g20.6 19 1.834 - - 1.000 - - - 0.834 - -
8. CU929328.1 ENSDARG00000105332 31 1.786 - - 0.788 - - 0.998 - - -
9. mirlet7a-6 15 1.715 - - 0.759 - - - 0.956 - - microRNA let7a-6
10. RBM44 RBM44 25 1.714 - - 0.950 - - - 0.764 - -
11. AC024175.9 AC024175.9 56 1.713 - - - - - 0.991 0.722 - -
12. si:dkey-173l11.3 si:dkey-173l11.3 14 1.71 - - - - 0.710 - 1.000 - -
13. pla2g4a pla2g4a 7 1.702 - - - - 0.702 - 1.000 - -
14. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1.702 - - - - 0.702 - 1.000 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
15. si:dkey-25o1.4 si:dkey-25o1.4 1 1.702 - - - - 0.702 - 1.000 - -
16. CLCN2 CLCN2 8 1.702 - - - - 0.702 - 1.000 - -
17. smpdl3a ENSDARG00000053119 1 1.702 - - 1.000 - 0.702 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
18. CR759816.1 ENSDARG00000098977 27 1.702 - - - - 0.702 1.000 - - -
19. ADAD1 ENSDARG00000089181 9 1.702 - - - - 0.702 - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
20. neu4 ENSDARG00000057677 1 1.702 - - 1.000 - 0.702 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
21. PPHLN1 ENSDARG00000045692 4 1.702 - - - - 0.702 - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
22. CR753866.2 CR753866.2 6 1.695 - - 0.993 - 0.702 - - - -
23. CR387932.2 CR387932.2 3 1.663 - - - - 0.702 - 0.961 - -
24. ENDOD1_4 ENDOD1_4 2 1.567 - - - - 0.702 - 0.865 - -
25. si:rp71-10g3.1 si:rp71-10g3.1 6 1.487 - - 0.785 - 0.702 - - - -
26. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - - - - - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
27. RGS14 RGS14 15 1 - - - - - - 1.000 - -
28. si:ch211-244b2.3 ENSDARG00000069244 19 1 - - - - - - 1.000 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
29. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
30. slc5a12 ENSDARG00000005004 15 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
31. CABZ01055343.1 CABZ01055343.1 12 1 - - - - - - 1.000 - -
32. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
33. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
34. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
35. btr29 ENSDARG00000099138 5 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
36. sinup ENSDARG00000017163 5 1 - - 1.000 - - - - - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
37. dock11 ENSDARG00000062485 17 1 - - - - - - 1.000 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
38. CR388416.3 CR388416.3 1 1 - - - - - - 1.000 - -
39. fam207a ENSDARG00000071500 106 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
40. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
41. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
42. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
43. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
44. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - 1.000 - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
45. si:ch211-150h8.2 si:ch211-150h8.2 0 1 - - - - - - - 1.000 -
46. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
47. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
48. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
49. DGKG ENSDARG00000062696 1 1 - - - - - - 1.000 - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
50. efemp2b ENSDARG00000020811 116 1 - - - - - - 1.000 - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
51. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
52. ripply3 ENSDARG00000036974 30 1 - - - - - - 1.000 - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
53. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
54. nfixb ENSDARG00000061836 7 1 - - - - - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
55. si:dkey-211g8.6 ENSDARG00000063088 19 1 - - - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
56. CR339057.1 CR339057.1 7 1 - - - - - - 1.000 - -
57. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
58. si:dkey-13m3.1 si:dkey-13m3.1 45 1 - - - - - - 1.000 - -
59. wdr27_1 ENSDARG00000053386 1 1 - - - - - - 1.000 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
60. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
61. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
62. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - - 1.000 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
63. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
64. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
65. cd74a ENSDARG00000009087 20 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
66. SNORD52 SNORD52 23 1 - - - - - - 1.000 - -
67. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
68. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
69. GPR137B GPR137B 50 1 - - 1.000 - - - - - -
70. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
71. zgc:110286 92 1 - - - - - 1.000 - - - zgc:110286
72. C12H17orf70 C12H17orf70 25 1 - - - - - - 1.000 - -
73. TRIM35_6 TRIM35_6 1 1 - - - - - - 1.000 - -
74. ankar ENSDARG00000000516 3 1 - - 1.000 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
75. CMAS CMAS 10 1 - - - - - - - 1.000 -
76. si:dkey-27n6.5 23 1 - - - - - - 1.000 - - si:dkey-27n6.5
77. ihhb ENSDARG00000058815 31 1 - - - - - - - 1.000 - Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135]
78. 5S_rRNA_16 5S_rRNA_16 10 1 - - - - - - - 1.000 -
79. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
80. gpr158 gpr158 52 1 - - - - - - 1.000 - -
81. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
82. si:dkey-179j5.5 ENSDARG00000074538, ENSDARG00000116016, ENSDARG00000116908 1 1 - - - - - - 1.000 - - si:dkey-179j5.5 [Source:ZFIN;Acc:ZDB-GENE-070705-320]
83. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
84. runx2a ENSDARG00000040261 1 1 - - 1.000 - - - - - - runt-related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-040629-3]
85. AL929220.1 ENSDARG00000103323 14 1 - - - - - - 1.000 - -
86. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
87. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 1 - - - - 1.000 - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
88. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
89. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
90. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - - - 1.000 - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
91. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
92. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - - - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
93. TDRD12 ENSDARG00000075217 3 1 - - 1.000 - - - - - - tudor domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-121214-348]
94. CU302326.3 CU302326.3 6 1 - - - - - - 1.000 - -
95. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - - - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
96. U6_27 U6_27 1 1 - - - - - - 1.000 - -
97. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - - 1.000 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
98. zgc:172014 ENSDARG00000101775 3 1 - - - - - - 1.000 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
99. CIR1 ENSDARG00000099733 66 1 - - - - - 1.000 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
100. mgat3 mgat3 195 1 - - - - - - 1.000 - -

There are 1416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA