Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-115f9.2

Gene Name Gene ID Reads Annotation
si:dkey-115f9.2 si:dkey-115f9.2 18










Genes with expression patterns similar to si:dkey-115f9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-115f9.2 si:dkey-115f9.2 18 5 - - 1.000 - 1.000 1.000 1.000 1.000 -
2. NMI 3 2 - - - - - - 1.000 1.000 - N-myc (and STAT) interactor
3. slc6a19b ENSDARG00000056719 140 2 - - - - - 1.000 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
4. sc:d0139 sc:d0139 233 1.893 - - - - - 0.995 0.898 - -
5. FOLR1 FOLR1 25 1.89 - - 0.890 - - - 1.000 - -
6. USP43 USP43 14 1.857 - - 0.934 - - - 0.923 - -
7. si:rp71-45g20.6 si:rp71-45g20.6 19 1.834 - - 1.000 - - - 0.834 - -
8. CU929328.1 ENSDARG00000105332 31 1.786 - - 0.788 - - 0.998 - - -
9. mirlet7a-6 15 1.715 - - 0.759 - - - 0.956 - - microRNA let7a-6
10. RBM44 RBM44 25 1.714 - - 0.950 - - - 0.764 - -
11. AC024175.9 AC024175.9 56 1.713 - - - - - 0.991 0.722 - -
12. si:dkey-173l11.3 si:dkey-173l11.3 14 1.71 - - - - 0.710 - 1.000 - -
13. ADAD1 ENSDARG00000089181 9 1.702 - - - - 0.702 - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
14. pla2g4a pla2g4a 7 1.702 - - - - 0.702 - 1.000 - -
15. si:dkey-25o1.4 si:dkey-25o1.4 1 1.702 - - - - 0.702 - 1.000 - -
16. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1.702 - - - - 0.702 - 1.000 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
17. neu4 ENSDARG00000057677 1 1.702 - - 1.000 - 0.702 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
18. CLCN2 CLCN2 8 1.702 - - - - 0.702 - 1.000 - -
19. smpdl3a ENSDARG00000053119 1 1.702 - - 1.000 - 0.702 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
20. CR759816.1 ENSDARG00000098977 27 1.702 - - - - 0.702 1.000 - - -
21. PPHLN1 ENSDARG00000045692 4 1.702 - - - - 0.702 - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
22. CR753866.2 CR753866.2 6 1.695 - - 0.993 - 0.702 - - - -
23. CR387932.2 CR387932.2 3 1.663 - - - - 0.702 - 0.961 - -
24. ENDOD1_4 ENDOD1_4 2 1.567 - - - - 0.702 - 0.865 - -
25. si:rp71-10g3.1 si:rp71-10g3.1 6 1.487 - - 0.785 - 0.702 - - - -
26. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
27. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
28. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
29. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
30. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
31. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
32. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
33. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
34. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - 1.000 -
35. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
36. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
37. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
38. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
39. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
40. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
41. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
42. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
43. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
44. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
45. gper gper 4 1 - - - - - - 1.000 - -
46. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
47. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
48. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
49. samd7 ENSDARG00000060354 15 1 - - 1.000 - - - - - - sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
50. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
51. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
52. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
53. CMAS CMAS 10 1 - - - - - - - 1.000 -
54. SNORD10 SNORD10 71 1 - - - - - - 1.000 - -
55. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
56. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
57. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
58. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
59. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
60. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
61. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
62. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
63. manba_1 ENSDARG00000008238 8 1 - - - - - - - 1.000 - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
64. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -
65. stoml3a ENSDARG00000079914 4 1 - - - - - - - 1.000 - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
66. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
67. si:ch211-150h8.2 si:ch211-150h8.2 0 1 - - - - - - - 1.000 -
68. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
69. sinup ENSDARG00000017163 5 1 - - 1.000 - - - - - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
70. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
71. pnp4b ENSDARG00000029230 6 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
72. CABZ01024686.1 CABZ01024686.1 1 1 - - - - - - - 1.000 -
73. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
74. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
75. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
76. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
77. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
78. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 - - - - - - 1.000 - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
79. CU302326.3 CU302326.3 6 1 - - - - - - 1.000 - -
80. DGKG ENSDARG00000062696 1 1 - - - - - - 1.000 - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
81. CU596012.1 CU596012.1 24 1 - - 1.000 - - - - - -
82. sumo2a ENSDARG00000104390 4 1 - - - - - - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
83. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
84. kcnc2 ENSDARG00000057468 12 1 - - 1.000 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
85. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
86. AL929220.1 ENSDARG00000103323 14 1 - - - - - - 1.000 - -
87. slc2a9l1 ENSDARG00000070672 1 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose transporter), member 9-like 1 [Source:ZFIN;Acc:ZDB-GENE-090915-3]
88. zgc:66484 ENSDARG00000030478 167 1 - - - - - - 1.000 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
89. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - - - 1.000 - -
90. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
91. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
92. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
93. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
94. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
95. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
96. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
97. c1qtnf5 ENSDARG00000056134 729 1 - - - - - - 1.000 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
98. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 1 - - - - 1.000 - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
99. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
100. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4

There are 1416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA