Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-115f9.2

Gene Name Gene ID Reads Annotation
si:dkey-115f9.2 si:dkey-115f9.2 18










Genes with expression patterns similar to si:dkey-115f9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-115f9.2 si:dkey-115f9.2 18 5 - - 1.000 - 1.000 1.000 1.000 1.000 -
2. NMI 3 2 - - - - - - 1.000 1.000 - N-myc (and STAT) interactor
3. slc6a19b ENSDARG00000056719 140 2 - - - - - 1.000 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
4. sc:d0139 sc:d0139 233 1.893 - - - - - 0.995 0.898 - -
5. FOLR1 FOLR1 25 1.89 - - 0.890 - - - 1.000 - -
6. USP43 USP43 14 1.857 - - 0.934 - - - 0.923 - -
7. si:rp71-45g20.6 si:rp71-45g20.6 19 1.834 - - 1.000 - - - 0.834 - -
8. CU929328.1 ENSDARG00000105332 31 1.786 - - 0.788 - - 0.998 - - -
9. mirlet7a-6 15 1.715 - - 0.759 - - - 0.956 - - microRNA let7a-6
10. RBM44 RBM44 25 1.714 - - 0.950 - - - 0.764 - -
11. AC024175.9 AC024175.9 56 1.713 - - - - - 0.991 0.722 - -
12. si:dkey-173l11.3 si:dkey-173l11.3 14 1.71 - - - - 0.710 - 1.000 - -
13. si:dkey-25o1.4 si:dkey-25o1.4 1 1.702 - - - - 0.702 - 1.000 - -
14. pla2g4a pla2g4a 7 1.702 - - - - 0.702 - 1.000 - -
15. ADAD1 ENSDARG00000089181 9 1.702 - - - - 0.702 - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
16. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1.702 - - - - 0.702 - 1.000 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
17. neu4 ENSDARG00000057677 1 1.702 - - 1.000 - 0.702 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
18. PPHLN1 ENSDARG00000045692 4 1.702 - - - - 0.702 - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
19. smpdl3a ENSDARG00000053119 1 1.702 - - 1.000 - 0.702 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
20. CR759816.1 ENSDARG00000098977 27 1.702 - - - - 0.702 1.000 - - -
21. CLCN2 CLCN2 8 1.702 - - - - 0.702 - 1.000 - -
22. CR753866.2 CR753866.2 6 1.695 - - 0.993 - 0.702 - - - -
23. CR387932.2 CR387932.2 3 1.663 - - - - 0.702 - 0.961 - -
24. ENDOD1_4 ENDOD1_4 2 1.567 - - - - 0.702 - 0.865 - -
25. si:rp71-10g3.1 si:rp71-10g3.1 6 1.487 - - 0.785 - 0.702 - - - -
26. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -
27. stoml3a ENSDARG00000079914 4 1 - - - - - - - 1.000 - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
28. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
29. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
30. manba_1 ENSDARG00000008238 8 1 - - - - - - - 1.000 - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
31. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
32. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
33. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
34. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
35. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
36. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
37. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
38. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
39. CMAS CMAS 10 1 - - - - - - - 1.000 -
40. SNORD10 SNORD10 71 1 - - - - - - 1.000 - -
41. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
42. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
43. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
44. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
45. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
46. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
47. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
48. sinup ENSDARG00000017163 5 1 - - 1.000 - - - - - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
49. pnp4b ENSDARG00000029230 6 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
50. CABZ01024686.1 CABZ01024686.1 1 1 - - - - - - - 1.000 -
51. si:ch211-150h8.2 si:ch211-150h8.2 0 1 - - - - - - - 1.000 -
52. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
53. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
54. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
55. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - 1.000 -
56. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
57. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
58. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
59. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
60. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
61. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
62. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
63. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
64. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
65. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
66. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
67. gper gper 4 1 - - - - - - 1.000 - -
68. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
69. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
70. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
71. samd7 ENSDARG00000060354 15 1 - - 1.000 - - - - - - sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
72. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
73. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
74. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
75. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
76. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
77. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
78. VSIG10L ENSDARG00000089237 12 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
79. zgc:173593 ENSDARG00000077360 10 1 - - - - - - 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
80. U6_27 U6_27 1 1 - - - - - - 1.000 - -
81. mgat3 mgat3 195 1 - - - - - - 1.000 - -
82. CABZ01055343.1 CABZ01055343.1 12 1 - - - - - - 1.000 - -
83. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - 1.000 - -
84. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
85. si:dkey-211g8.6 ENSDARG00000063088 19 1 - - - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
86. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
87. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - - - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
88. zgc:174153 ENSDARG00000079376 12007 1 - - - - - - 1.000 - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
89. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - 1.000 - -
90. ripply3 ENSDARG00000036974 30 1 - - - - - - 1.000 - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
91. TOX4 TOX4 0 1 - - - - - - - 1.000 -
92. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - - 1.000 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
93. si:dkey-27n6.5 23 1 - - - - - - 1.000 - - si:dkey-27n6.5
94. si:ch211-59g22.1 si:ch211-59g22.1 0 1 - - - - - - - 1.000 -
95. GPR137B GPR137B 50 1 - - 1.000 - - - - - -
96. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
97. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
98. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
99. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
100. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]

There are 1416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA