Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-114b16.5

Gene Name Gene ID Reads Annotation
si:dkey-114b16.5 si:dkey-114b16.5 5










Genes with expression patterns similar to si:dkey-114b16.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-114b16.5 si:dkey-114b16.5 5 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000
2. CABZ01053592.1 ENSDARG00000117388 6 2.83 - - 1.000 - 0.830 1.000 - - -
3. tagln ENSDARG00000045408 48 2.596 - - 1.000 - 0.719 0.877 - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
4. cacna1aa ENSDARG00000037905 4 2 - - 1.000 - - 1.000 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
5. itln1 ENSDARG00000007534 8 1.988 - - 0.988 - - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
6. BX682558.1 ENSDARG00000101975 30 1.944 - - 0.944 - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
7. si:ch211-10p21.1 si:ch211-10p21.1 6 1.929 - - 0.929 - - 1.000 - - -
8. BX465203.1 ENSDARG00000113985 8 1.924 - - - 0.924 - 1.000 - - -
9. IMPG2_1 IMPG2_1 2 1.924 - - - 0.924 - 1.000 - - -
10. polk ENSDARG00000059963 5 1.876 - - - - - 1.000 - - 0.876 polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
11. sh3bp1 ENSDARG00000078119 5 1.83 - - 1.000 - 0.830 - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
12. CR848763.1 CR848763.1 9 1.83 - - - - 0.830 1.000 - - -
13. cox4i1l ENSDARG00000012388 584 1.825 - - 0.866 0.959 - - - - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
14. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.823 - - - - 0.823 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
15. cdk20 ENSDARG00000003867 27 1.81 - - - 0.810 - 1.000 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
16. CPEB4_1 CPEB4_1 1 1.81 - - 1.000 0.810 - - - - -
17. akap8l ENSDARG00000099635 2 1.783 - - 0.953 - 0.830 - - - - A kinase (PRKA) anchor protein 8-like [Source:ZFIN;Acc:ZDB-GENE-040426-2303]
18. znf536 ENSDARG00000103648 6 1.778 - - 0.951 - - - - - 0.827 zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
19. AC024175.21 AC024175.21 10 1.743 - - 0.743 - - 1.000 - - -
20. si:dkey-4j21.1 17 1.72 - - - - 0.720 1.000 - - - si:dkey-4j21.1, transcript variant X2
21. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1.705 - - - 0.924 - - - - 0.781 hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
22. pdcd7 ENSDARG00000038976 420 1.651 - - - 0.909 - 0.742 - - - programmed cell death 7 [Source:ZFIN;Acc:ZDB-GENE-040728-3]
23. ucp3 ENSDARG00000091209 137 1.596 - - 0.809 - - 0.787 - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
24. trpc2 trpc2 10 1.577 - - 0.835 - 0.742 - - - -
25. MVD MVD 32 1.577 - - - - 0.796 - - - 0.781
26. egr3 ENSDARG00000089156 71 1.569 - - 0.739 - 0.830 - - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
27. gpr124 gpr124 25 1.513 - - - - - 0.719 - - 0.794
28. vax2 ENSDARG00000058702 175 1.474 - - 0.703 0.771 - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
29. c6ast1 ENSDARG00000069216 8 1 - - - - - 1.000 - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
30. ANKRD27 ENSDARG00000089207 3 1 - - - - - 1.000 - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
31. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
32. C11H1orf116 C11H1orf116 9 1 - - - - 1.000 - - - -
33. sult1st8 sult1st8 6 1 - - - - - 1.000 - - -
34. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
35. RBBP6_8 RBBP6_8 10 1 - - - - - 1.000 - - -
36. kcne4 ENSDARG00000068257 13 1 - - - - - 1.000 - - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
37. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
38. stm ENSDARG00000035694 1567 1 - - - - - 1.000 - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
39. btf3l4 ENSDARG00000089681 2 1 - - - - - 1.000 - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
40. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - - 1.000 - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
41. si:dkey-14o6.8 ENSDARG00000103239 3 1 - - - - - 1.000 - - - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
42. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
43. tpbgl ENSDARG00000114338 5 1 - - - - - 1.000 - - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
44. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - 1.000 - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
45. kcnh4 kcnh4 6 1 - - - - 1.000 - - - -
46. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
47. SLC39A11 ENSDARG00000098194 23 1 - - - - - 1.000 - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
48. si:ch211-153l6.4 si:ch211-153l6.4 45 1 - - - - - 1.000 - - -
49. tnni1b ENSDARG00000052708 478 1 - - - - - 1.000 - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
50. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - 1.000 - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
51. BX005294.1 ENSDARG00000101338 1 1 - - 1.000 - - - - - -
52. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - - - 1.000 - - -
53. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
54. spef2 ENSDARG00000098330 59 1 - - - - - 1.000 - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
55. cacng7b ENSDARG00000070624 18 1 - - - - - - - - 1.000 calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
56. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
57. aqp9b ENSDARG00000053480 16 1 - - - - - 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
58. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - 1.000 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
59. si:dkey-93l1.4 ENSDARG00000094927 0 1 - - - - - 1.000 - - - si:dkey-93l1.4 [Source:ZFIN;Acc:ZDB-GENE-090311-20]
60. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
61. GMNC ENSDARG00000068719 28 1 - - - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
62. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
63. HTR7 17 1 - - 1.000 - - - - - - 5-hydroxytryptamine receptor 7
64. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
65. irak3 ENSDARG00000053131 16 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
66. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
67. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
68. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
69. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
70. CU984579.1 ENSDARG00000116863 15 1 - - 1.000 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
71. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
72. sytl5 ENSDARG00000062135 11 1 - - - - - 1.000 - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
73. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
74. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
75. si:dkey-13m3.2 ENSDARG00000103424 15 1 - - 1.000 - - - - - - si:dkey-13m3.2 [Source:ZFIN;Acc:ZDB-GENE-121214-42]
76. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - 1.000 - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
77. BX276122.1 BX276122.1 1 1 - - 1.000 - - - - - -
78. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - 1.000 - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
79. TRIM35_1 TRIM35_1 11 1 - - - - - 1.000 - - -
80. mpg ENSDARG00000069729 43 1 - - - - - 1.000 - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
81. zgc:55413 79 1 - - - - - 1.000 - - - zgc:55413
82. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -
83. CALN1 ENSDARG00000088898 114 1 - - - - - 1.000 - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
84. bmp1b ENSDARG00000028053 25 1 - - - - - 1.000 - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
85. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
86. dnaaf3 ENSDARG00000092662 20 1 - - - - - 1.000 - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
87. KCNQ4 ENSDARG00000089490 1 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-120215-132]
88. si:dkey-257e4.2 si:dkey-257e4.2 0 1 - - - - - 1.000 - - -
89. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - - - - - 1.000 - - -
90. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
91. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - - - - - 1.000 - - -
92. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
93. sema6e ENSDARG00000000189 35 1 - - - - - 1.000 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
94. zmynd10 ENSDARG00000002406, ENSDARG00000110880, ENSDARG00000114303 10 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1218]
95. LRFN4_1 LRFN4_1 5 1 - - 1.000 - - - - - -
96. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
97. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
98. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
99. zgc:123068 ENSDARG00000017489 15 1 - - - - - 1.000 - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
100. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - 1.000 - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]

There are 615 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA