Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-114b16.5

Gene Name Gene ID Reads Annotation
si:dkey-114b16.5 si:dkey-114b16.5 5










Genes with expression patterns similar to si:dkey-114b16.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-114b16.5 si:dkey-114b16.5 5 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000
2. CABZ01053592.1 ENSDARG00000117388 6 2.83 - - 1.000 - 0.830 1.000 - - -
3. tagln ENSDARG00000045408 48 2.596 - - 1.000 - 0.719 0.877 - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
4. cacna1aa ENSDARG00000037905 4 2 - - 1.000 - - 1.000 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
5. itln1 ENSDARG00000007534 8 1.988 - - 0.988 - - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
6. BX682558.1 ENSDARG00000101975 30 1.944 - - 0.944 - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
7. si:ch211-10p21.1 si:ch211-10p21.1 6 1.929 - - 0.929 - - 1.000 - - -
8. IMPG2_1 IMPG2_1 2 1.924 - - - 0.924 - 1.000 - - -
9. BX465203.1 ENSDARG00000113985 8 1.924 - - - 0.924 - 1.000 - - -
10. polk ENSDARG00000059963 5 1.876 - - - - - 1.000 - - 0.876 polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
11. CR848763.1 CR848763.1 9 1.83 - - - - 0.830 1.000 - - -
12. sh3bp1 ENSDARG00000078119 5 1.83 - - 1.000 - 0.830 - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
13. cox4i1l ENSDARG00000012388 584 1.825 - - 0.866 0.959 - - - - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
14. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.823 - - - - 0.823 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
15. CPEB4_1 CPEB4_1 1 1.81 - - 1.000 0.810 - - - - -
16. cdk20 ENSDARG00000003867 27 1.81 - - - 0.810 - 1.000 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
17. akap8l ENSDARG00000099635 2 1.783 - - 0.953 - 0.830 - - - - A kinase (PRKA) anchor protein 8-like [Source:ZFIN;Acc:ZDB-GENE-040426-2303]
18. znf536 ENSDARG00000103648 6 1.778 - - 0.951 - - - - - 0.827 zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
19. AC024175.21 AC024175.21 10 1.743 - - 0.743 - - 1.000 - - -
20. si:dkey-4j21.1 17 1.72 - - - - 0.720 1.000 - - - si:dkey-4j21.1, transcript variant X2
21. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1.705 - - - 0.924 - - - - 0.781 hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
22. pdcd7 ENSDARG00000038976 420 1.651 - - - 0.909 - 0.742 - - - programmed cell death 7 [Source:ZFIN;Acc:ZDB-GENE-040728-3]
23. ucp3 ENSDARG00000091209 137 1.596 - - 0.809 - - 0.787 - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
24. trpc2 trpc2 10 1.577 - - 0.835 - 0.742 - - - -
25. MVD MVD 32 1.577 - - - - 0.796 - - - 0.781
26. egr3 ENSDARG00000089156 71 1.569 - - 0.739 - 0.830 - - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
27. gpr124 gpr124 25 1.513 - - - - - 0.719 - - 0.794
28. vax2 ENSDARG00000058702 175 1.474 - - 0.703 0.771 - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
29. pdzrn3a ENSDARG00000073757 1 1 - - 1.000 - - - - - - PDZ domain containing RING finger 3a [Source:ZFIN;Acc:ZDB-GENE-090313-307]
30. spef2 ENSDARG00000098330 59 1 - - - - - 1.000 - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
31. mir142a 20 1 - - - - - 1.000 - - - microRNA 142a
32. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
33. rilpl1 0 1 - - - - - 1.000 - - - Rab interacting lysosomal protein-like 1
34. c1ql3a ENSDARG00000010350 179 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
35. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - - 1.000 - - - - -
36. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
37. crygs2 ENSDARG00000041171, ENSDARG00000111780 0 1 - - - - - 1.000 - - - crystallin, gamma S2 [Source:ZFIN;Acc:ZDB-GENE-050126-3]
38. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
39. mpg ENSDARG00000069729 43 1 - - - - - 1.000 - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
40. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
41. ccdc127a 39 1 - - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
42. ehf ENSDARG00000052115, ENSDARG00000112589 24 1 - - - - - 1.000 - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
43. CR388164.2 ENSDARG00000096885 1 1 - - 1.000 - - - - - -
44. si:dkey-182i3.11 ENSDARG00000069270 3 1 - - - - - 1.000 - - - si:dkey-182i3.11 [Source:ZFIN;Acc:ZDB-GENE-121214-258]
45. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
46. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - 1.000 - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
47. TRIM35_1 TRIM35_1 11 1 - - - - - 1.000 - - -
48. BX276122.1 BX276122.1 1 1 - - 1.000 - - - - - -
49. CU861664.1 CU861664.1 53 1 - - - - - 1.000 - - -
50. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
51. scn1a 8 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
52. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - 1.000 - - - - - -
53. LOXL2 LOXL2 2 1 - - - - - 1.000 - - -
54. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
55. zgc:55413 79 1 - - - - - 1.000 - - - zgc:55413
56. znf804b ENSDARG00000103396 11 1 - - 1.000 - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
57. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - 1.000 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
58. SLC39A11 ENSDARG00000098194 23 1 - - - - - 1.000 - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
59. fars2 ENSDARG00000091247 1 1 - - 1.000 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
60. si:ch211-202c21.7 ENSDARG00000094126 2 1 - - - - - 1.000 - - - si:ch211-202c21.7 [Source:ZFIN;Acc:ZDB-GENE-081031-16]
61. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - - 1.000 - - - - - -
62. allc ENSDARG00000042562 12 1 - - 1.000 - - - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
63. LBH ENSDARG00000111701 1 1 - - 1.000 - - - - - - limb bud and heart development [Source:ZFIN;Acc:ZDB-GENE-040426-1613]
64. CABZ01115881.1 ENSDARG00000086539 2 1 - - 1.000 - - - - - - SH2 domain containing 3A [Source:NCBI gene;Acc:100331568]
65. U6_12 U6_12 0 1 - - - - - 1.000 - - -
66. PEG3_24 PEG3_24 5 1 - - 1.000 - - - - - -
67. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
68. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
69. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
70. tnnc1a ENSDARG00000011400 165 1 - - - - - 1.000 - - - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
71. agfg1a ENSDARG00000030020 6 1 - - - - - 1.000 - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
72. si:ch211-278p9.1 ENSDARG00000087532 18 1 - - - - - 1.000 - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
73. tpbgl ENSDARG00000114338 5 1 - - - - - 1.000 - - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
74. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - - 1.000 - - - - - -
75. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
76. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1 - - 1.000 - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
77. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1 - - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
78. THBD ENSDARG00000092470 1 1 - - 1.000 - - - - - - thrombomodulin [Source:ZFIN;Acc:ZDB-GENE-110411-281]
79. nceh1a ENSDARG00000020427 35 1 - - - - - 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
80. RECK ENSDARG00000090039 15 1 - - - - - 1.000 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
81. GMNC ENSDARG00000068719 28 1 - - - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
82. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
83. stm ENSDARG00000035694 1567 1 - - - - - 1.000 - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
84. irak3 ENSDARG00000053131 16 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
85. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - 1.000 - - -
86. supt7l ENSDARG00000013461 41 1 - - - - - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
87. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - 1.000 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
88. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
89. aqp9b ENSDARG00000053480 16 1 - - - - - 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
90. zgc:123068 ENSDARG00000017489 15 1 - - - - - 1.000 - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
91. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
92. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
93. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
94. CABZ01048675.1 CABZ01048675.1 4 1 - - 1.000 - - - - - -
95. rc3h2 ENSDARG00000063050 7 1 - - - - - 1.000 - - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
96. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
97. zgc:123060_1 5 1 - - - - - 1.000 - - - zgc:123060
98. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
99. si:dkeyp-85d8.5 ENSDARG00000103346 3 1 - - - - 1.000 - - - - si:dkeyp-85d8.5 [Source:ZFIN;Acc:ZDB-GENE-110913-144]
100. itih6 ENSDARG00000056037 3 1 - - 1.000 - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]

There are 615 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA