Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-109m8.1

Gene Name Gene ID Reads Annotation
si:dkey-109m8.1 si:dkey-109m8.1 2










Genes with expression patterns similar to si:dkey-109m8.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-109m8.1 si:dkey-109m8.1 2 3 - - - 1.000 1.000 - - 1.000 -
2. chd3 ENSDARG00000021405, ENSDARG00000115235 17 2 - - - 1.000 1.000 - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
3. BX927253.1 ENSDARG00000096072 1 2 - - - - 1.000 - - 1.000 -
4. si:dkey-273g18.1 ENSDARG00000097405, ENSDARG00000105439 64 1.466 - - - 0.725 - - - 0.741 - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
5. TTC40 TTC40 1 1 - - - - - - - 1.000 -
6. si:ch211-165f21.6 si:ch211-165f21.6 5 1 - - - - - - - 1.000 -
7. gatsl3 7 1 - - - - - - - 1.000 - GATS protein-like 3
8. U1 U1 0 1 - - - - 1.000 - - - -
9. si:ch211-125e6.6 si:ch211-125e6.6 0 1 - - - - 1.000 - - - -
10. si:ch211-213a13.5 ENSDARG00000071618 0 1 - - - - - - - 1.000 - si:ch211-213a13.5 [Source:ZFIN;Acc:ZDB-GENE-050208-711]
11. ZC3H8 ZC3H8 114 1 - - - 1.000 - - - - -
12. ZBED1_4 ZBED1_4 2 1 - - - - 1.000 - - - -
13. si:dkey-20i20.10 ENSDARG00000095455 3 1 - - - - 1.000 - - - - si:dkey-20i20.10 [Source:ZFIN;Acc:ZDB-GENE-060503-905]
14. rad21l1 ENSDARG00000022493 4 1 - - - 1.000 - - - - - RAD21 cohesin complex component like 1 [Source:ZFIN;Acc:ZDB-GENE-061103-505]
15. BX323450.2 BX323450.2 2 1 - - - - 1.000 - - - -
16. SYCP2L 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2-like, transcript variant X3
17. PLXNB2_1 PLXNB2_1 10 1 - - - - - - - 1.000 -
18. SNORA16_1 SNORA16_1 1 1 - - - - 1.000 - - - -
19. PDE4B PDE4B 13 1 - - - - - - - 1.000 -
20. BX569789.4 BX569789.4 3 1 - - - - 1.000 - - - -
21. im:7151068 im:7151068 2 1 - - - - 1.000 - - - -
22. mep1a.1 ENSDARG00000029747 4 1 - - - - 1.000 - - - - meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041001-209]
23. fgl2 fgl2 9 1 - - - - 1.000 - - - -
24. adgra1a ENSDARG00000054177 19 1 - - - - - - - 1.000 - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
25. lhx8b ENSDARG00000042145 0 1 - - - - 1.000 - - - - LIM homeobox 8b [Source:ZFIN;Acc:ZDB-GENE-081105-153]
26. si:dkeyp-116h7.2 si:dkeyp-116h7.2 7 1 - - - 1.000 - - - - -
27. GGT5 GGT5 1 1 - - - - 1.000 - - - -
28. U1_11 U1_11 0 1 - - - - 1.000 - - - -
29. ATG16L2 ENSDARG00000043238, ENSDARG00000109384 0 1 - - - - 1.000 - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
30. casp6l2 ENSDARG00000070368, ENSDARG00000111446 1 1 - - - - - - - 1.000 - caspase 6, apoptosis-related cysteine peptidase, like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-12]
31. olig1 ENSDARG00000040948 1 1 - - - - 1.000 - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
32. si:ch73-91k6.6 si:ch73-91k6.6 1 1 - - - 1.000 - - - - -
33. si:ch211-203b20.7 ENSDARG00000053036, ENSDARG00000113237 0 1 - - - - 1.000 - - - - si:ch211-203b20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-302]
34. tbc1d20 ENSDARG00000032298 1 1 - - - - 1.000 - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
35. TRIM35 TRIM35 100 1 - - - - 1.000 - - - -
36. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - 1.000 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
37. Metazoa_SRP_26 Metazoa_SRP_26 0 1 - - - - 1.000 - - - -
38. si:ch73-196i15.4 si:ch73-196i15.4 0 1 - - - - 1.000 - - - -
39. si:dkey-192p21.6 ENSDARG00000091212 3 1 - - - 1.000 - - - - - si:dkey-192p21.6 [Source:ZFIN;Acc:ZDB-GENE-060503-809]
40. si:dkey-47k20.5 ENSDARG00000115763 0 1 - - - - 1.000 - - - - si:dkey-47k20.5 [Source:ZFIN;Acc:ZDB-GENE-060503-77]
41. si:ch211-229l10.11 ENSDARG00000101223 3 1 - - - - 1.000 - - - - si:ch211-229l10.11 [Source:ZFIN;Acc:ZDB-GENE-110913-131]
42. CABZ01080134.1 CABZ01080134.1 2 1 - - - - 1.000 - - - -
43. amy2a ENSDARG00000013856 13 1 - - - - 1.000 - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
44. U1_36 U1_36 0 1 - - - - 1.000 - - - -
45. BX901974.1 ENSDARG00000067592 2 1 - - - - 1.000 - - - -
46. TMEM132A ENSDARG00000105005 4 1 - - - - 1.000 - - - - transmembrane protein 132A [Source:ZFIN;Acc:ZDB-GENE-140106-237]
47. map3k9 ENSDARG00000013491 1 1 - - - - 1.000 - - - - mitogen-activated protein kinase kinase kinase 9 [Source:ZFIN;Acc:ZDB-GENE-081113-5]
48. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - - - 1.000 - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
49. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - - - 1.000 - - - - -
50. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - - - 1.000 - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
51. CABZ01065246.2 CABZ01065246.2 45 1 - - - - 1.000 - - - -
52. CMA1_7 CMA1_7 1 1 - - - - 1.000 - - - -
53. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - 1.000 - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
54. UBXN11 ENSDARG00000053828 22 1 - - - - - - - 1.000 - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
55. CR391991.2 ENSDARG00000103510 0 1 - - - - 1.000 - - - -
56. sebox ENSDARG00000042526 2 1 - - - - 1.000 - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
57. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - - - 1.000 - - - - -
58. ighv8-3 ENSDARG00000114819 0 1 - - - - 1.000 - - - - immunoglobulin heavy variable 8-3 [Source:ZFIN;Acc:ZDB-GENE-040514-28]
59. 5S_rRNA_11 5S_rRNA_11 1 1 - - - 1.000 - - - - -
60. CNTD1 2 1 - - - - 1.000 - - - - cyclin N-terminal domain containing 1
61. cbln9 ENSDARG00000030254, ENSDARG00000111671 0 1 - - - - 1.000 - - - - cerebellin 9 [Source:ZFIN;Acc:ZDB-GENE-040724-34]
62. GPRIN1 10 1 - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 1
63. calhm1 ENSDARG00000077021 2 1 - - - - 1.000 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
64. U1_12 U1_12 0 1 - - - - 1.000 - - - -
65. DNAI1_1 DNAI1_1 2 1 - - - 1.000 - - - - -
66. si:ch211-57m13.1 ENSDARG00000095927 1 1 - - - - 1.000 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
67. PLA2G4C_2 PLA2G4C_2 10 1 - - - - 1.000 - - - -
68. SNORA53 SNORA53 10 1 - - - - 1.000 - - - -
69. cyp3a65 ENSDARG00000103295 7 1 - - - 1.000 - - - - - cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
70. U2_2 U2_2 2 1 - - - - 1.000 - - - -
71. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - - - - 1.000 - - - -
72. CR376723.1 CR376723.1 8 1 - - - 1.000 - - - - -
73. CABZ01088691.2 CABZ01088691.2 0 1 - - - - 1.000 - - - -
74. BX005106.1 BX005106.1 22 1 - - - - 1.000 - - - -
75. ttll3 ENSDARG00000053728 7 1 - - - - - - - 1.000 - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
76. si:dkeyp-85d8.4 si:dkeyp-85d8.4 1 1 - - - - 1.000 - - - -
77. CABZ01079979.1 CABZ01079979.1 1 1 - - - - 1.000 - - - -
78. CTRL ENSDARG00000068680 1 1 - - - - 1.000 - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
79. RBBP6_12 RBBP6_12 0 1 - - - - 1.000 - - - -
80. CR558302.1 ENSDARG00000115782 0 1 - - - - 1.000 - - - -
81. scospondin ENSDARG00000067859 4 1 - - - - 1.000 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
82. sox32 ENSDARG00000100591 2 1 - - - - 1.000 - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
83. arl10 37 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 10
84. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - 1.000 - - - -
85. zgc:158345 2 1 - - - - 1.000 - - - - zgc:158345
86. DNAI1 DNAI1 11 1 - - - - 1.000 - - - -
87. eef1a2 ENSDARG00000006838, ENSDARG00000111569 2 1 - - - - 1.000 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040718-64]
88. igsf5 igsf5 85 1 - - - 1.000 - - - - -
89. CABZ01075242.1 ENSDARG00000114227 9 1 - - - - 1.000 - - - -
90. cdk20 ENSDARG00000003867 27 1 - - - - - - - 1.000 - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
91. CABZ01039424.1 CABZ01039424.1 15 1 - - - - 1.000 - - - -
92. si:ch73-289h5.4 ENSDARG00000077488 0 1 - - - - 1.000 - - - - si:ch73-289h5.4 [Source:ZFIN;Acc:ZDB-GENE-110913-10]
93. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - 1.000 - - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
94. si:dkey-4c15.17 si:dkey-4c15.17 1 1 - - - 1.000 - - - - -
95. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - 1.000 - - - -
96. si:busm1-228j01.6 ENSDARG00000041705 0 1 - - - - - - - 1.000 - si:busm1-228j01.6 [Source:ZFIN;Acc:ZDB-GENE-030616-396]
97. TRIM35_2 TRIM35_2 0 1 - - - - - - - 1.000 -
98. avp ENSDARG00000058567 4 1 - - - - 1.000 - - - - arginine vasopressin [Source:ZFIN;Acc:ZDB-GENE-030407-2]
99. arhgef19 ENSDARG00000078853 17 1 - - - 1.000 - - - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
100. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - - - 1.000 - - - -

There are 164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA