Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-103i16.2

Gene Name Gene ID Reads Annotation
si:dkey-103i16.2 si:dkey-103i16.2 492










Genes with expression patterns similar to si:dkey-103i16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-103i16.2 si:dkey-103i16.2 492 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. syt12 ENSDARG00000101776 215 2.978 0.836 0.713 - - - 0.723 0.706 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
3. fbxo41 ENSDARG00000078908 95 2.433 0.730 1.000 - - - 0.703 - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
4. hecw1 hecw1 241 2.425 0.720 0.888 - - - - 0.817 - -
5. si:dkeyp-117h8.4 ENSDARG00000043004 457 2.41 0.733 - - - - - 0.720 0.957 - si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]
6. PEX5L PEX5L 179 2.311 0.772 0.795 - - - - 0.744 - -
7. fam43b ENSDARG00000070222 92 2.302 0.862 - - - - 0.708 0.732 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
8. SPTBN4_1 ENSDARG00000092624 473 2.178 0.763 - - - - 0.705 0.710 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
9. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.958 - 1.000 - - - - - 0.958 - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
10. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1.857 - 1.000 0.857 - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
11. PARP6 PARP6 119 1.84 0.840 1.000 - - - - - - -
12. nell2b ENSDARG00000062797 854 1.816 0.866 0.950 - - - - - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
13. arsa ENSDARG00000042270 74 1.801 - 1.000 0.801 - - - - - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
14. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.794 0.855 - - - - - - 0.939 - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
15. si:ch211-263m18.4 ENSDARG00000093353 27 1.786 - 1.000 0.786 - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
16. si:ch211-237c9.3 si:ch211-237c9.3 17 1.781 - 1.000 - - - - 0.781 - -
17. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.775 0.775 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
18. syt9a ENSDARG00000003994 298 1.772 - 1.000 - - - - 0.772 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
19. CABZ01038313.1 CABZ01038313.1 79 1.743 - 1.000 - - - - 0.743 - -
20. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 1.741 0.784 - - - - - - 0.957 - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
21. bsk146 ENSDARG00000099069 274 1.729 0.729 1.000 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
22. gria2b ENSDARG00000052765 188 1.697 - 0.950 - - - 0.747 - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
23. SASH1 SASH1 274 1.689 - 0.952 - 0.737 - - - - -
24. cacnb4b ENSDARG00000062174 159 1.683 - 0.900 - - - - 0.783 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
25. snx27b ENSDARG00000016977 2768 1.678 - - 0.739 - - - - 0.939 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
26. eno2 ENSDARG00000014287 2162 1.677 0.742 - - - - - - 0.935 - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
27. suz12a ENSDARG00000070256 2229 1.666 - - - - - 0.712 - 0.954 - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
28. FRRS1L ENSDARG00000103940 224 1.662 0.890 - - - - - 0.772 - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
29. atp2a3 ENSDARG00000060978 1408 1.662 - - 0.723 - - - - 0.939 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
30. gmpr ENSDARG00000016160 1537 1.656 - 0.730 - - - - - 0.926 - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
31. puf60a ENSDARG00000032175 5618 1.653 - - - - - - 0.705 0.948 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
32. si:ch211-243a20.3 ENSDARG00000092240 151 1.644 - 0.896 0.748 - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
33. syncripl ENSDARG00000026723 3889 1.634 - - - - - - 0.724 0.910 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
34. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.612 0.908 - - - - 0.704 - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
35. hoxc13b ENSDARG00000113877 549 1.609 - - - - - - - 0.895 0.714 homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
36. tmie ENSDARG00000069423 305 1.608 0.846 - - - - 0.762 - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
37. snap25a ENSDARG00000020609 4537 1.604 0.707 - - - - - - 0.897 - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
38. smarca5 ENSDARG00000052348 15433 1.603 - - - - - 0.757 - 0.846 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
39. CABZ01111926.1 CABZ01111926.1 249 1.6 - 0.873 0.727 - - - - - -
40. her2 ENSDARG00000038205 3219 1.597 0.810 - - - - 0.787 - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
41. sox21b ENSDARG00000008540 1460 1.595 0.864 0.731 - - - - - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
42. lpar6b ENSDARG00000069441 65 1.581 - 0.819 0.762 - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
43. lfng ENSDARG00000037879 11783 1.579 0.713 - - - - - - 0.866 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
44. nova2 ENSDARG00000017673 7685 1.578 0.815 - - - - - - 0.763 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
45. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.571 - - - - - 0.725 - 0.846 - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
46. wu:fb17g07 wu:fb17g07 10567 1.565 - - - - - - 0.726 0.839 -
47. hmp19 2554 1.562 0.858 - 0.704 - - - - - - HMP19 protein
48. pcp4a ENSDARG00000053130 1024 1.554 0.798 - 0.756 - - - - - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
49. SGIP1 SGIP1 236 1.55 0.766 - - - - - 0.784 - -
50. dpysl5a ENSDARG00000011141 1827 1.545 0.748 0.797 - - - - - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
51. snip1 ENSDARG00000087528 275 1.545 0.804 - - 0.741 - - - - - Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
52. TTC9 ENSDARG00000074363 196 1.544 - 0.761 - - - - 0.783 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
53. dfnb31a 166 1.543 - 0.817 - - - 0.726 - - - deafness, autosomal recessive 31a, transcript variant X3
54. thsd7a thsd7a 194 1.537 0.786 0.751 - - - - - - -
55. nhlh2 ENSDARG00000025495 1860 1.537 0.813 - - - - 0.724 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
56. dpysl5b ENSDARG00000059311 600 1.534 0.718 0.816 - - - - - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
57. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.53 - - - - - 0.815 0.715 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
58. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 1.519 0.800 - - - - 0.719 - - - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
59. cdkn2d ENSDARG00000094176 190 1.513 - - - - - 0.752 0.761 - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
60. chico ENSDARG00000019588 77 1.513 - 0.713 0.800 - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
61. kidins220b ENSDARG00000017338 1937 1.511 - - 0.811 - - 0.700 - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
62. BAI1 BAI1 173 1.508 0.795 0.713 - - - - - - -
63. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.508 0.787 - - - - - 0.721 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
64. neurog1 ENSDARG00000056130 3924 1.508 0.774 - - - - 0.734 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
65. epb41a ENSDARG00000099283 860 1.508 0.761 - - - - 0.747 - - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
66. GABRG1 ENSDARG00000101995 201 1.502 0.782 - - - - 0.720 - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
67. gdf11 ENSDARG00000044924 534 1.502 - 0.713 - - - 0.789 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
68. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.496 0.728 - - - - 0.768 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
69. fyna ENSDARG00000011370 1679 1.494 0.762 - - - - 0.732 - - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
70. si:dkey-242k1.6 ENSDARG00000101205 112 1.493 0.779 - - 0.714 - - - - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
71. map1aa ENSDARG00000059601 599 1.488 0.713 - - - - - 0.775 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
72. scn1lab ENSDARG00000062744 155 1.485 0.754 0.731 - - - - - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
73. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.482 0.711 0.771 - - - - - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
74. rtf1 ENSDARG00000008947 6596 1.481 0.720 - - - - - - 0.761 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
75. CABZ01080599.2 CABZ01080599.2 192 1.481 0.764 - - - - 0.717 - - -
76. magi1a ENSDARG00000070145 547 1.481 - - - - - 0.776 0.705 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
77. thsd7ba ENSDARG00000095022 231 1.48 - 0.770 - - - - 0.710 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
78. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.477 0.715 - - - - 0.762 - - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
79. mpp2a ENSDARG00000053453 68 1.474 0.742 - - - - - 0.732 - - membrane protein, palmitoylated 2a (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-071004-82]
80. si:ch211-247j9.1 ENSDARG00000079283 217 1.474 - - - - - 0.764 0.710 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
81. hnrnpa3 ENSDARG00000059351 453 1.473 - - - 0.734 - 0.739 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
82. mllt1 mllt1 974 1.473 - - 0.726 0.747 - - - - -
83. spock2 ENSDARG00000075393 791 1.472 0.741 - - - - - 0.731 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
84. lin7b ENSDARG00000037932 150 1.467 - - - 0.728 - 0.739 - - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
85. clstn3 ENSDARG00000073883 590 1.465 0.741 - - - - - 0.724 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
86. dpysl3 ENSDARG00000002587 4381 1.459 0.719 - - - - - - 0.740 - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
87. GJD2_1 GJD2_1 3045 1.458 - - - - - 0.748 0.710 - -
88. CHRNB4 ENSDARG00000101677 128 1.454 0.718 - - - - - 0.736 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
89. lrrc4.1 ENSDARG00000069402 323 1.45 0.746 0.704 - - - - - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
90. GLRA3 ENSDARG00000011066 242 1.436 0.711 - - - - 0.725 - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
91. foxb1a ENSDARG00000089042 101 1.434 0.730 0.704 - - - - - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
92. syngr3a ENSDARG00000014871 405 1.434 0.732 - - - - - 0.702 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
93. SHARPIN ENSDARG00000076995 235 1.424 - - - - - 0.721 0.703 - - SHANK-associated RH domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-101223-1]
94. MDC1 ENSDARG00000086764 1851 1.423 0.706 - - - - - 0.717 - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
95. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.42 0.719 - - - - - 0.701 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
96. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.413 0.709 - - - - 0.704 - - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
97. zgc:153031 ENSDARG00000068876 73 1.411 - 0.704 - - 0.707 - - - - zgc:153031 [Source:ZFIN;Acc:ZDB-GENE-060929-1190]
98. chd7 ENSDARG00000075211 12085 1.408 0.702 - - - - - 0.706 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
99. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.408 0.705 - - - - - - - 0.703 zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
100. dixdc1a ENSDARG00000025302 716 1.403 - 0.700 - - - - 0.703 - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]

There are 1385 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA