Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-94f11.5

Gene Name Gene ID Reads Annotation
si:ch73-94f11.5 si:ch73-94f11.5 6










Genes with expression patterns similar to si:ch73-94f11.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-94f11.5 si:ch73-94f11.5 6 6 - 1.000 1.000 - 1.000 1.000 - 1.000 1.000
2. ccr6a ENSDARG00000087474 10 2 - 1.000 - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
3. GAS2 18 2 - 1.000 - - - 1.000 - - - growth arrest specific 2, transcript variant X1
4. ZNF337_16 ZNF337_16 22 2 - 1.000 - - - 1.000 - - -
5. BX005294.2 ENSDARG00000109361 3 2 - 1.000 - - - 1.000 - - -
6. sez6l ENSDARG00000100594 35 1.994 - 1.000 - - - 0.994 - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
7. FAXC FAXC 102 1.895 - 1.000 - - - 0.895 - - -
8. pcyt1ba ENSDARG00000058162 206 1.879 - 1.000 - - - 0.879 - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
9. cdh18 cdh18 64 1.864 - 1.000 - - - 0.864 - - -
10. GADD45G_1 GADD45G_1 236 1.84 - 1.000 - - - 0.840 - - -
11. IKZF4 ENSDARG00000037068 36 1.818 - - - - 0.818 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
12. sst6 ENSDARG00000093804, ENSDARG00000116656 31 1.812 - - - - 0.864 0.948 - - - somatostatin 6 [Source:ZFIN;Acc:ZDB-GENE-081022-199]
13. si:dkey-233e3.4 si:dkey-233e3.4 3 1.803 - 1.000 0.803 - - - - - -
14. RAPGEF4 ENSDARG00000079872 82 1.775 - 1.000 - - - 0.775 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
15. dlg2 ENSDARG00000099323 162 1.771 - 0.890 - - - 0.881 - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
16. zgc:153615 ENSDARG00000038981 105 1.762 - 1.000 - - - 0.762 - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
17. rpap2 ENSDARG00000038397 118 1.761 - 0.884 - - - 0.877 - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
18. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1.746 - 1.000 - - - 0.746 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
19. actl6b ENSDARG00000034107 9 1.739 - 1.000 - - - 0.739 - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
20. si:ch211-168h21.3 10 1.733 - - - - 0.733 1.000 - - - si:ch211-168h21.3
21. kcnh1a ENSDARG00000024167 9 1.733 - 1.000 - - 0.733 - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
22. zgc:152698 32 1.711 - 1.000 0.711 - - - - - - zgc:152698
23. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1.71 - 0.710 - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
24. Mar-11 Mar-11 5 1.702 - - - - 1.000 - - 0.702 -
25. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.669 - 0.865 - - - 0.804 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
26. gpr56 gpr56 523 1.667 - 0.823 - - - 0.844 - - -
27. sprn ENSDARG00000056004 128 1.583 - - 0.807 - - 0.776 - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
28. SMUG1 ENSDARG00000101308 236 1.57 - 0.812 - - - 0.758 - - - single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9473]
29. rnf144ab ENSDARG00000042557 136 1.535 - - 0.710 - - 0.825 - - - ring finger protein 144ab [Source:ZFIN;Acc:ZDB-GENE-040718-486]
30. nlgn3a ENSDARG00000104786 91 1.523 - 0.740 - - - 0.783 - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
31. pyya ENSDARG00000053449 134 1.513 - - - - 0.733 0.780 - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
32. Metazoa_SRP_10 Metazoa_SRP_10 5 1.44 - - - - 0.733 - - - 0.707
33. si:ch211-187d1.1 si:ch211-187d1.1 4 1.418 - - 0.711 - - - - - 0.707
34. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
35. trpa1b ENSDARG00000031875 39 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
36. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
37. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
38. trpm2_1 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
39. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
40. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
41. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
42. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
43. CYP27A1 CYP27A1 4 1 - - - - - 1.000 - - -
44. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
45. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
46. grin2ca ENSDARG00000078149 13 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
47. SOX8 SOX8 22 1 - - - - 1.000 - - - -
48. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
49. RIC3_1 ENSDARG00000105549 2 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
50. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
51. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
52. PRKCA_1 ENSDARG00000099841 12 1 - - - - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
53. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
54. hivep3a ENSDARG00000075928 17 1 - - - - - 1.000 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
55. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
56. BX927122.3 BX927122.3 19 1 - 1.000 - - - - - - -
57. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
58. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
59. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
60. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
61. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 - 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
62. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
63. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
64. fermt3a fermt3a 56 1 - 1.000 - - - - - - -
65. GPR114 GPR114 1 1 - - - - - 1.000 - - -
66. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
67. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
68. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
69. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
70. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
71. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
72. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
73. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
74. thbs2a ENSDARG00000060410 0 1 - 1.000 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]
75. CU457778.2 ENSDARG00000109381 2 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
76. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
77. KRT9 KRT9 7 1 - - - - 1.000 - - - -
78. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
79. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
80. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
81. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
82. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
83. si:dkey-234k7.2 si:dkey-234k7.2 4 1 - - - - - 1.000 - - -
84. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
85. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
86. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
87. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - - - - - 1.000 - - -
88. si:dkeyp-98a7.5 0 1 - - - - 1.000 - - - - si:dkeyp-98a7.5
89. traf1 ENSDARG00000069482 50 1 - 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
90. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
91. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
92. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
93. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
94. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
95. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
96. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
97. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
98. dpyda dpyda 12 1 - - - - 1.000 - - - -
99. BX511266.1 BX511266.1 21 1 - - - - - 1.000 - - -
100. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]

There are 881 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA