Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-62b13.1

Gene Name Gene ID Reads Annotation
si:ch73-62b13.1 ENSDARG00000093269 11 si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]










Genes with expression patterns similar to si:ch73-62b13.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-62b13.1 ENSDARG00000093269 11 6 - 1.000 1.000 1.000 - - 1.000 1.000 1.000 si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
2. CR383676.3_2 CR383676.3_2 9 2.511 - 0.917 0.856 0.738 - - - - -
3. prph2a ENSDARG00000038018 2 2 - 1.000 - - - - 1.000 - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
4. adcyap1a ENSDARG00000004015 67 2 - 1.000 - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
5. slc2a5 ENSDARG00000077875 5 2 - 1.000 - - - - 1.000 - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
6. taok3b ENSDARG00000094052 36 2 - 1.000 - - - - 1.000 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
7. CABZ01060813.1 CABZ01060813.1 12 2 - 1.000 - - - - 1.000 - -
8. mkks ENSDARG00000016139 70 2 - 1.000 - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
9. CCNO 21 2 - 1.000 - - - - 1.000 - - cyclin O
10. BX248582.3 BX248582.3 3 2 - 1.000 - - - - 1.000 - -
11. si:ch211-120c15.3 ENSDARG00000101807 19 2 - 1.000 - - - - 1.000 - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
12. CU694952.2 CU694952.2 3 2 - 1.000 - - - - 1.000 - -
13. gria4a ENSDARG00000037496 88 1.985 - 1.000 - - - - 0.985 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
14. ATXN1 ATXN1 12 1.943 - 1.000 0.943 - - - - - -
15. pgap1 ENSDARG00000062465 30 1.835 - - 0.835 - - - 1.000 - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
16. cldnd ENSDARG00000006580 17 1.828 - - 0.828 - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
17. c6ast3 ENSDARG00000024503 2 1.819 - - - 0.819 - - 1.000 - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
18. lrrn3 lrrn3 137 1.794 - 1.000 - - - - 0.794 - -
19. sphkap ENSDARG00000017429 60 1.792 - 1.000 - - - - 0.792 - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
20. ndrg1b ENSDARG00000010420 116 1.778 - - - 0.778 - - 1.000 - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
21. slc43a3a ENSDARG00000059682 27 1.766 - 1.000 0.766 - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
22. GRIN3A ENSDARG00000075802 27 1.759 - 1.000 - - - - 0.759 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
23. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1.747 - 0.747 - - - - 1.000 - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
24. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1.747 - 0.747 - - - - 1.000 - -
25. mpz ENSDARG00000038609 1740 1.719 - 1.000 - - - - 0.719 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
26. PIAS1 PIAS1 13 1.701 - - - - - - 1.000 0.701 -
27. CABZ01063077.1 CABZ01063077.1 22 1.65 - - - - - - 0.923 0.727 -
28. ODF2 ODF2 6 1.56 - - 0.822 - - - - 0.738 -
29. SPOCK1 ENSDARG00000074644 794 1.556 - 0.850 - - - - 0.706 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
30. ndel1a ENSDARG00000010953 292 1.533 - 0.820 - - - - 0.713 - - nudE neurodevelopment protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040115-2]
31. sema3c ENSDARG00000034300 881 1.522 - 0.818 - - - - 0.704 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
32. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1.499 - 0.729 - 0.770 - - - - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
33. kcnk9 ENSDARG00000104563 92 1.497 - - 0.754 - - - 0.743 - - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
34. cbln1 ENSDARG00000057296 165 1.464 - 0.721 - - - - 0.743 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
35. map7d2a ENSDARG00000068480 513 1.444 - 0.729 - - - - 0.715 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
36. ccdc129 37 1 - 1.000 - - - - - - - coiled-coil domain containing 129, transcript variant X2
37. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
38. sebox ENSDARG00000042526 2 1 - 1.000 - - - - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
39. kiaa0947l kiaa0947l 61 1 - - - - - - 1.000 - -
40. si:dkey-25i10.6 si:dkey-25i10.6 2 1 - - - - - - 1.000 - -
41. DHX32 DHX32 181 1 - 1.000 - - - - - - -
42. pcdh8 ENSDARG00000006467 317 1 - 1.000 - - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
43. APEX2 ENSDARG00000008472 7 1 - 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
44. si:dkey-193c22.1 ENSDARG00000093687 104 1 - - - - - - 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
45. sftpbb ENSDARG00000067566 13 1 - - - - - - 1.000 - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
46. il21 ENSDARG00000067847 2 1 - - - - - - 1.000 - - interleukin 21 [Source:ZFIN;Acc:ZDB-GENE-120510-4]
47. elk4 ENSDARG00000077092 19 1 - 1.000 - - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
48. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
49. fgd5a ENSDARG00000088801 3 1 - 1.000 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
50. b3gat2 ENSDARG00000030733 348 1 - 1.000 - - - - - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
51. mei4 ENSDARG00000043912 10 1 - - - - - - 1.000 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
52. BX511034.2 ENSDARG00000071636 31 1 - 1.000 - - - - - - - novel protein similar to vertebrate amiloride-sensitive cation channel 2 neuronal (ACCN2) [Source:NCBI gene;Acc:100151078]
53. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
54. b3gntl1 ENSDARG00000043431 50 1 - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
55. ctskl ctskl 17 1 - 1.000 - - - - - - -
56. erbb4a ENSDARG00000063207 55 1 - - - - - - 1.000 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
57. CU459094.1 ENSDARG00000110517 17 1 - 1.000 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
58. gng2 ENSDARG00000056831 81 1 - - - - - - 1.000 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
59. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
60. SYNDIG1 ENSDARG00000100751 165 1 - 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
61. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
62. SHANK1_1 SHANK1_1 0 1 - - - - - - 1.000 - -
63. rnf217 ENSDARG00000060944 10 1 - 1.000 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
64. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
65. si:dkey-70b24.7 si:dkey-70b24.7 5 1 - 1.000 - - - - - - -
66. prdm14 ENSDARG00000045371 106 1 - - - - - - 1.000 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
67. caps2 ENSDARG00000058486 4 1 - 1.000 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
68. SMARCA4 ENSDARG00000104339 48 1 - - - - - - 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
69. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - 1.000 - - - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
70. nptx2b ENSDARG00000045164 5 1 - - - - - - 1.000 - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
71. NAV1_1 NAV1_1 35 1 - - - - - - 1.000 - -
72. mpp7b ENSDARG00000025168 0 1 - - - - - - 1.000 - - membrane protein, palmitoylated 7b (MAGUK p55 subfamily member 7) [Source:ZFIN;Acc:ZDB-GENE-141212-293]
73. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - 1.000 - - - - - - -
74. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - - - - 1.000 - -
75. itln1 ENSDARG00000007534 8 1 - 1.000 - - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
76. il7r ENSDARG00000078970 4 1 - - - - - - 1.000 - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
77. grm1a ENSDARG00000026796 9 1 - - - - - - 1.000 - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
78. PRKD1 ENSDARG00000075949 15 1 - - - - - - 1.000 - - protein kinase D1 [Source:ZFIN;Acc:ZDB-GENE-080131-1]
79. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
80. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
81. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
82. CHD6 ENSDARG00000017244 219 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
83. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1 - - - - - - 1.000 - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
84. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -
85. s100t ENSDARG00000055589 453 1 - 1.000 - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
86. CABZ01088365.1 CABZ01088365.1 66 1 - 1.000 - - - - - - -
87. CABZ01056052.1 ENSDARG00000110748 3 1 - 1.000 - - - - - - -
88. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
89. elfn1b ENSDARG00000074372 25 1 - 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
90. hdhd2 ENSDARG00000024728 5 1 - - - - - - 1.000 - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
91. PLCB1 2 1 - - - - - - 1.000 - - phospholipase C beta 1
92. ush1g ush1g 0 1 - - - - - - 1.000 - -
93. mir20b 0 1 - - - - - - 1.000 - - microRNA 20b
94. dnm1a ENSDARG00000010042 43 1 - - - - - - 1.000 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
95. CABZ01066439.2 CABZ01066439.2 5 1 - - - - - - 1.000 - -
96. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
97. tsen54 ENSDARG00000036844 11 1 - 1.000 - - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
98. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
99. TNFRSF14_1 TNFRSF14_1 165 1 - 1.000 - - - - - - -
100. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b

There are 1129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA