Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-387e10.3

Gene Name Gene ID Reads Annotation
si:ch73-387e10.3 si:ch73-387e10.3 517










Genes with expression patterns similar to si:ch73-387e10.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-387e10.3 si:ch73-387e10.3 517 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. pex16 ENSDARG00000058202 486 2.534 - - - 0.793 - - - 0.957 0.784 peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
3. dmbx1b ENSDARG00000002510 351 2.486 - 0.809 - 0.885 - - 0.792 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
4. slc5a3a ENSDARG00000010376 134 2.34 - - - - - 0.825 0.807 - 0.708 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
5. dpy19l1l ENSDARG00000069995 584 1.808 - - - - - 0.875 0.933 - - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
6. ndufaf4 ENSDARG00000077859 552 1.805 - - - 0.914 - - - 0.891 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
7. PARP12 PARP12 77 1.79 - - - 0.952 - - 0.838 - -
8. pik3c3 ENSDARG00000054829 559 1.789 - - - 0.858 - - - 0.931 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
9. rprd2b ENSDARG00000074676 809 1.769 - - - 0.886 - - - 0.883 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
10. fam172a ENSDARG00000052697 422 1.766 - - - 0.913 - - - 0.853 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
11. dnajc18 ENSDARG00000056005 8084 1.763 - - - 0.906 - - - 0.857 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
12. rnf220a ENSDARG00000060929 693 1.75 - - - 0.909 - - - 0.841 - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
13. RBM26 ENSDARG00000104130 1012 1.748 - - - 0.869 - - - 0.879 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
14. ctdspla ENSDARG00000071673 1447 1.745 - - - 0.833 - - - 0.912 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
15. ly75 ENSDARG00000053113 196 1.731 - - - - - - 0.795 0.936 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
16. ercc3 ENSDARG00000002402 340 1.728 - 0.785 - 0.943 - - - - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
17. si:dkey-56e3.3 ENSDARG00000075194 491 1.72 - - - 0.836 - - 0.884 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
18. CABZ01045230.1 CABZ01045230.1 158 1.717 - - - - - 0.763 - 0.954 -
19. ANK1_1 ANK1_1 507 1.715 - - - 0.923 - - - 0.792 -
20. pdxka ENSDARG00000088959 217 1.711 - 0.780 - - - - - 0.931 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
21. exd2 ENSDARG00000016117 342 1.708 - - - 0.934 - 0.774 - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
22. gna13b ENSDARG00000037924 1963 1.703 - 0.835 - - - - - 0.868 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
23. rhogb ENSDARG00000004301 358 1.696 - - - - - - 0.828 0.868 - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
24. atp6ap1a ENSDARG00000041417 898 1.685 - - - 0.876 - - - 0.809 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
25. enosf1 ENSDARG00000038359 209 1.684 - 0.751 - - - - - 0.933 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
26. camk2d1 ENSDARG00000043010 669 1.679 - - - 0.754 - - - 0.925 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
27. pnkd ENSDARG00000071032 447 1.677 - - - 0.855 - - - 0.822 - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
28. si:dkey-114c15.7 237 1.671 - - - - - 0.743 - 0.928 - si:dkey-114c15.7
29. HTRA4 ENSDARG00000005943 77 1.671 - 0.722 - 0.949 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
30. slc6a6a ENSDARG00000012534 183 1.664 - 0.711 - - - - - 0.953 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
31. DIP2C DIP2C 222 1.66 - - - 0.952 - - 0.708 - -
32. CDKN1C CDKN1C 667 1.659 - 0.720 - 0.939 - - - - -
33. si:dkey-219c3.2 ENSDARG00000075805 619 1.656 - 0.726 - 0.930 - - - - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
34. KBTBD13_1 KBTBD13_1 116 1.656 - 0.719 - - - - - 0.937 -
35. CU633775.1 ENSDARG00000113543 319 1.654 - - - 0.925 - - - - 0.729
36. tmie ENSDARG00000069423 305 1.65 - 0.749 - - - - - 0.901 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
37. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.646 - 0.700 - 0.946 - - - - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
38. chst13 chst13 669 1.642 - - - - - - 0.877 0.765 -
39. pde4cb ENSDARG00000002411 63 1.634 - 0.773 - - - - 0.861 - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
40. cwc27 ENSDARG00000043727 690 1.625 - - - 0.903 - 0.722 - - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
41. cdan1 ENSDARG00000042261 658 1.624 - - - 0.902 - 0.722 - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
42. zgc:113336 ENSDARG00000104078 147 1.622 - - - - - - 0.919 - 0.703 zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
43. snai1a ENSDARG00000056995 1427 1.614 - - - 0.847 - - 0.767 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
44. NAALAD2 ENSDARG00000021383 704 1.611 - 0.832 - - - - 0.779 - - N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
45. rprd2a ENSDARG00000058089 743 1.609 - - - 0.758 - - - 0.851 - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
46. esyt3 ENSDARG00000006422 335 1.6 - 0.882 - - - - - - 0.718 extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
47. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.597 - - - 0.855 - - - 0.742 - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
48. sorbs2a ENSDARG00000003046 242 1.589 - 0.786 - 0.803 - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
49. SDK2 SDK2 145 1.582 - - - - - 0.730 0.852 - -
50. chst12a ENSDARG00000028786 598 1.58 - - - - - 0.729 - 0.851 - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
51. ddb1 ENSDARG00000074431 1054 1.579 - - - 0.788 - - - 0.791 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
52. fam65a 731 1.578 - - - - - - 0.725 0.853 - family with sequence similarity 65, member A, transcript variant X5
53. vps36 ENSDARG00000057021 636 1.573 - 0.801 - - - - 0.772 - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
54. scamp5 scamp5 797 1.573 - 0.824 - 0.749 - - - - -
55. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.572 - - - 0.818 - - - - 0.754 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
56. cnot8 ENSDARG00000020043 866 1.545 - - - 0.828 - - 0.717 - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
57. bcmo1a bcmo1a 402 1.544 0.754 - - - - - 0.790 - -
58. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 1.542 - - - - - 0.715 - - 0.827 KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
59. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.54 - 0.759 - - - - 0.781 - - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
60. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.539 - - - 0.801 - - - - 0.738 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
61. cpz ENSDARG00000075521 2356 1.519 - - - - - - 0.727 0.792 - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
62. ubtf ENSDARG00000035066 4070 1.518 - - - 0.753 - - - 0.765 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
63. si:dkey-15h8.15 ENSDARG00000102601 335 1.514 - - - 0.723 - - 0.791 - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
64. DMXL1 DMXL1 798 1.513 - - - - - - 0.803 0.710 -
65. med19b ENSDARG00000009472 936 1.508 - - - 0.740 - - - 0.768 - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
66. si:ch211-76l23.5 si:ch211-76l23.5 26 1.503 - 0.759 - - - - - - 0.744
67. agtr1b ENSDARG00000045443 232 1.502 - 0.717 - - - - - - 0.785 angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
68. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.482 - 0.735 - - - 0.747 - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
69. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.482 - 0.722 - 0.760 - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
70. STARD10 ENSDARG00000097718 181 1.477 - - - - - 0.748 0.729 - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
71. kazald2 ENSDARG00000078518 3062 1.459 - - - - - - 0.742 - 0.717 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
72. CBLC ENSDARG00000078217 96 1.447 - 0.721 - - - - 0.726 - - Cbl proto-oncogene C, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-080220-20]
73. iqsec2 iqsec2 304 1.425 - 0.724 - - - - - 0.701 -
74. mea1 ENSDARG00000039820 589 0.959 - - - - - - - 0.959 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
75. ncoa6 ENSDARG00000071272 759 0.958 - - - - - - - 0.958 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
76. BX511021.1 ENSDARG00000073936 647 0.957 - - - - - - - 0.957 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
77. b3galtla b3galtla 111 0.956 - - - - - - - 0.956 -
78. gng2_1 ENSDARG00000056831 113 0.956 - - - 0.956 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
79. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.956 - - - 0.956 - - - - -
80. zgc:174877 ENSDARG00000079278 143 0.956 - - - - - - - 0.956 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
81. mgll ENSDARG00000036820 747 0.956 - - - 0.956 - - - - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
82. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.955 - - - - - - - 0.955 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
83. DTX3 DTX3 303 0.955 - - - 0.955 - - - - -
84. nrxn2b ENSDARG00000063150 343 0.955 - - - - - - - 0.955 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
85. rexo1 ENSDARG00000026986 770 0.955 - - - 0.955 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
86. si:dkey-157e10.7 si:dkey-157e10.7 105 0.954 - - - - - - - 0.954 -
87. GPR180 73 0.954 - - - 0.954 - - - - - G protein-coupled receptor 180, transcript variant X2
88. DHX36 ENSDARG00000101059 314 0.954 - - - 0.954 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
89. WDR89 ENSDARG00000077265 322 0.953 - - - 0.953 - - - - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
90. TP53BP2 TP53BP2 217 0.953 - - - 0.953 - - - - -
91. ADCY3 ADCY3 537 0.953 - - - 0.953 - - - - -
92. tuba4l ENSDARG00000074289 101 0.953 - - - 0.953 - - - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
93. SHISA9 SHISA9 154 0.953 - - - 0.953 - - - - -
94. mctp2a ENSDARG00000001414 307 0.953 - - - 0.953 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
95. si:dkey-100n10.2 101 0.952 - - - 0.952 - - - - - si:dkey-100n10.2
96. C12H10orf88 C12H10orf88 449 0.952 - - - 0.952 - - - - -
97. tmem104 ENSDARG00000088560 859 0.952 - - - 0.952 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
98. znhit2 ENSDARG00000030805 197 0.952 - - - 0.952 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
99. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.952 - - - 0.952 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
100. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.952 - - - - - - - 0.952 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]

There are 1617 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA