Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-375g18.1

Gene Name Gene ID Reads Annotation
si:ch73-375g18.1 ENSDARG00000075024 2431 si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]










Genes with expression patterns similar to si:ch73-375g18.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-375g18.1 ENSDARG00000075024 2431 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
2. tra2b ENSDARG00000002168 3218 2.68 - 0.994 0.941 - - - 0.745 - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
3. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 2.542 0.763 - 0.978 - - - 0.801 - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
4. ppm1da ENSDARG00000009273 7713 2.374 - 0.777 0.884 - - - 0.713 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
5. gfap ENSDARG00000025301 5584 1.964 - 0.992 0.972 - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
6. CABZ01079490.1 CABZ01079490.1 1808 1.963 - 0.993 0.970 - - - - - -
7. impdh2 ENSDARG00000006900 3197 1.956 - 0.968 - - - 0.988 - - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
8. zgc:100829 ENSDARG00000015557 1686 1.952 - 0.994 0.958 - - - - - - zgc:100829 [Source:ZFIN;Acc:ZDB-GENE-040801-54]
9. emc3 ENSDARG00000020607 3406 1.949 - 0.995 0.954 - - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
10. pes ENSDARG00000018902 3286 1.871 - - 0.879 - - 0.992 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
11. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.837 - - - - - 0.971 0.866 - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
12. zgc:111974 zgc:111974 1386 1.825 0.831 0.994 - - - - - - -
13. hnrpdl 14288 1.793 - - 0.897 - - 0.896 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
14. abat ENSDARG00000006031 2143 1.793 0.798 - - - - 0.995 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
15. txnipa ENSDARG00000036107 8863 1.791 - 0.867 - - - 0.924 - - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
16. dyrk1ab ENSDARG00000023814 1769 1.776 0.783 0.993 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
17. SMARCA1 ENSDARG00000012776 673 1.775 - - - - - 0.991 0.784 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
18. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.769 0.795 - 0.974 - - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
19. NFRKB ENSDARG00000091512 646 1.768 0.791 - 0.977 - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
20. sh3yl1 ENSDARG00000074393 815 1.765 0.776 - - - - 0.989 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
21. necap2 ENSDARG00000046002 4372 1.758 - - 0.974 - - - 0.784 - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
22. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.757 - 0.766 - - - 0.991 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
23. mat2b ENSDARG00000012932 3146 1.755 - 0.977 - - - - 0.778 - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
24. im:7136729 im:7136729 1625 1.753 - - 0.966 - - - 0.787 - -
25. atp2a3 ENSDARG00000060978 1408 1.752 0.766 - - - - 0.986 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
26. fibpa ENSDARG00000016058 2148 1.748 - - 0.893 - - - 0.855 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
27. arglu1b ENSDARG00000018319 1110 1.747 0.774 - 0.973 - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
28. ppfibp2b ENSDARG00000029168 961 1.745 - 0.993 - 0.752 - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
29. ctsf ENSDARG00000063095 4564 1.738 - - - - - 0.983 0.755 - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
30. sept8a ENSDARG00000032606 2737 1.738 - 0.959 - - - - 0.779 - - septin 8a [Source:ZFIN;Acc:ZDB-GENE-030131-309]
31. rab5c ENSDARG00000026712 4733 1.733 - - 0.968 - - - 0.765 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
32. bcl9 ENSDARG00000036687 1124 1.731 - - 0.969 - - - 0.762 - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
33. ddx42 ENSDARG00000037928 1659 1.731 - 0.993 - - - - 0.738 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
34. sec22a ENSDARG00000078328 1207 1.73 0.757 - 0.973 - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
35. ahsa1l ahsa1l 2366 1.73 0.737 0.993 - - - - - - -
36. angptl3 ENSDARG00000044365 574 1.73 - 0.993 - - - - 0.737 - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
37. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 1.724 0.734 0.990 - - - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
38. nme3 ENSDARG00000100990 3889 1.724 0.775 - 0.949 - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
39. ppifb ENSDARG00000052842 3533 1.722 0.773 - 0.949 - - - - - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
40. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.721 - - - - - 0.995 0.726 - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
41. mt-nd5 ENSDARG00000063921 21268 1.721 - - 0.844 - - 0.877 - - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
42. arf1l arf1l 9119 1.72 0.783 - - - - 0.937 - - -
43. tmem231 ENSDARG00000042272 557 1.707 - - 0.975 - - - 0.732 - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
44. CASKIN2_1 CASKIN2_1 2299 1.704 0.710 - - - - 0.994 - - -
45. ambp ENSDARG00000004296, ENSDARG00000112731 1305 1.702 0.790 - - - - 0.912 - - - alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
46. arpp19b ENSDARG00000039880 4823 1.7 - - 0.906 - - - 0.794 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
47. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.699 0.750 - 0.949 - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
48. epas1a ENSDARG00000008697 3225 1.699 - - 0.943 - - - 0.756 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
49. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.695 - - 0.957 - - - 0.738 - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
50. STARD4 ENSDARG00000102477 411 1.694 - 0.992 - - - - 0.702 - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
51. vta1 ENSDARG00000013732 6072 1.694 0.727 - 0.967 - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
52. tmed4 ENSDARG00000024954 3476 1.693 0.734 - 0.959 - - - - - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
53. srp19 ENSDARG00000035699 2624 1.693 0.713 - 0.980 - - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
54. cxxc1 cxxc1 914 1.693 - - 0.974 - - - 0.719 - -
55. atpv0e1 atpv0e1 1957 1.691 0.779 0.912 - - - - - - -
56. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.69 - 0.981 - - - - 0.709 - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
57. setd8b 2528 1.683 - - 0.942 - - - 0.741 - - SET domain containing (lysine methyltransferase) 8b
58. hnrnpul1 ENSDARG00000040564 6550 1.683 - - 0.960 - - - 0.723 - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
59. zgc:91909 ENSDARG00000021287 1488 1.679 0.847 - - - - - 0.832 - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
60. chd1l ENSDARG00000015471 1142 1.673 0.786 - 0.887 - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
61. mthfd1b ENSDARG00000040492 3784 1.672 - 0.966 - - - - 0.706 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
62. etfb ENSDARG00000009250 13036 1.671 - 0.922 - - - - 0.749 - - electron transfer flavoprotein subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-1931]
63. fkbp14 ENSDARG00000040695 7725 1.667 0.708 - - - - 0.959 - - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
64. cyc1 ENSDARG00000038075 16699 1.663 - 0.791 0.872 - - - - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
65. erlin1 ENSDARG00000021991 5664 1.645 - - 0.921 - - - 0.724 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
66. SVIL SVIL 2589 1.641 0.715 - 0.926 - - - - - -
67. wnt6b ENSDARG00000073935 236 1.638 0.868 - - - - - 0.770 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
68. ftr82 ENSDARG00000055647 3302 1.615 0.770 - - - - - 0.845 - - finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
69. eif2s1a ENSDARG00000005827 5992 1.61 0.753 - - - - - 0.857 - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
70. gmfb ENSDARG00000028327 6522 1.599 0.847 - - - - - 0.752 - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
71. ube2nb ENSDARG00000045877 4583 1.59 - - 0.873 - - - 0.717 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
72. rpl5a ENSDARG00000020197 35209 1.589 - - 0.709 - - 0.880 - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
73. chmp3 ENSDARG00000038064 577 1.579 0.833 - - 0.746 - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
74. top1l ENSDARG00000070545 40529 1.567 - - 0.802 - - 0.765 - - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
75. pdlim1 ENSDARG00000019845 5765 1.56 - - 0.827 - - - 0.733 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
76. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.557 0.821 - - - - - 0.736 - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
77. carhsp1 ENSDARG00000053129 2100 1.552 0.809 - - - - - 0.743 - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
78. ssx2ip ssx2ip 482 1.552 0.802 - - - - - 0.750 - -
79. IL17RD ENSDARG00000098359 2309 1.534 0.809 - - - - - 0.725 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
80. syncripl ENSDARG00000026723 3889 1.528 0.741 - 0.787 - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
81. BICD2 ENSDARG00000075571 401 1.525 0.762 - - - - - 0.763 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
82. MAP1S_1 MAP1S_1 1117 1.523 - - - 0.763 - - 0.760 - -
83. mvp ENSDARG00000021242 6875 1.523 0.710 - 0.813 - - - - - - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
84. mpp1 ENSDARG00000105287 1359 1.501 0.718 - - - - - 0.783 - - membrane protein, palmitoylated 1 [Source:ZFIN;Acc:ZDB-GENE-031113-4]
85. rnf170 ENSDARG00000104069 838 1.496 0.781 - - - - - 0.715 - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
86. pi4k2a ENSDARG00000033666 1257 1.487 0.752 - - - - - 0.735 - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
87. RBM6 ENSDARG00000077060 3521 1.481 0.712 - - - - - 0.769 - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
88. iah1 ENSDARG00000015765 326 1.481 0.753 - - - - - 0.728 - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
89. pycr1 pycr1 1258 1.48 0.758 - - - - - 0.722 - -
90. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.477 0.742 - - - - - 0.735 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
91. hsdl2 ENSDARG00000002523 2746 1.472 0.725 - - - - - 0.747 - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
92. bcl2l1 ENSDARG00000008434 1956 1.471 0.715 - - - - - 0.756 - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
93. tbca ENSDARG00000016754 6427 1.467 0.756 - - - - - 0.711 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
94. zgc:101663 ENSDARG00000037852 830 1.466 0.745 - - - - - 0.721 - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
95. golga7 ENSDARG00000057676 4691 1.465 0.741 - - - - - 0.724 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
96. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 0.996 - 0.996 - - - - - - - sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
97. creg2 ENSDARG00000000666 643 0.996 - - - - - 0.996 - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
98. snx27b ENSDARG00000016977 2768 0.996 - 0.996 - - - - - - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
99. yes1 ENSDARG00000005941 3577 0.996 - - - - - 0.996 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
100. zfyve21 ENSDARG00000027887 1687 0.995 - - - - - 0.995 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]

There are 1300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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