Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-367p23.2

Gene Name Gene ID Reads Annotation
si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]










Genes with expression patterns similar to si:ch73-367p23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
2. tnnt3b ENSDARG00000068457 101827 5.868 0.706 0.931 0.760 0.908 0.911 0.736 - 0.916 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
3. ckmb ENSDARG00000040565 505935 5.786 0.872 - 0.813 0.917 0.754 0.762 - 0.888 0.780 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. ttnb ttnb 73721 5.77 0.727 - 0.779 0.905 - 0.770 0.850 0.903 0.836
5. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 5.639 0.922 - 0.754 0.713 0.716 0.728 - 0.889 0.917 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
6. myoz1b ENSDARG00000071445 13381 5.436 0.898 - 0.787 0.932 - - 0.956 0.900 0.963 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
7. mybpc2b ENSDARG00000021265 9618 5.193 0.935 0.944 0.749 0.862 - - - 0.825 0.878 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
8. mylz3 ENSDARG00000017441 303597 5.151 0.880 - 0.793 0.934 - 0.727 - 0.915 0.902 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. atp2a1 ENSDARG00000020574 291561 5.131 0.927 - 0.833 0.892 - 0.714 - 0.862 0.903 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. BX294434.1 ENSDARG00000061272 6493 5.131 0.872 0.934 0.726 0.828 - - - 0.829 0.942 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
11. hhatla ENSDARG00000039051 6598 5.101 0.894 0.902 0.750 0.874 - - - 0.728 0.953 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
12. tpma ENSDARG00000033683 752432 5.098 0.930 - 0.801 0.850 - 0.910 - 0.810 0.797 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
13. si:ch211-226o13.2 84923 5.081 0.736 - 0.812 0.947 - 0.727 - 0.891 0.968 si:ch211-226o13.2
14. CR847973.1 ENSDARG00000115516 8754 5.068 0.854 0.840 0.754 0.875 - - - 0.854 0.891
15. ryr3 ENSDARG00000071331 6795 4.965 0.841 0.943 0.723 0.784 - - - 0.733 0.941 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
16. acta1b ENSDARG00000055618 195597 4.879 0.929 - 0.804 0.730 - 0.814 - 0.871 0.731 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
17. myhz1.3 ENSDARG00000067997 155509 4.733 0.943 - 0.759 0.826 0.733 - - 0.757 0.715 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
18. tnnt3a ENSDARG00000030270 112506 4.49 0.925 - 0.808 0.889 - - - 0.900 0.968 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
19. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 4.355 0.823 0.923 - 0.909 - - - 0.807 0.893 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
20. ckma ENSDARG00000035327, ENSDARG00000114671 418792 4.331 0.867 - 0.807 0.867 - - - 0.904 0.886 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
21. ttna ttna 101197 4.316 0.854 - 0.812 - - - 0.842 0.887 0.921
22. mylpfb ENSDARG00000002589 70167 4.302 - 0.918 0.806 0.947 - 0.743 - 0.888 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
23. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 4.293 0.910 - 0.773 0.903 - 0.794 - 0.913 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
24. CR354540.2 ENSDARG00000117517 18452 4.291 0.914 - 0.761 0.835 - - - 0.857 0.924
25. pkmb ENSDARG00000099860 25094 4.26 0.852 - - 0.884 - 0.842 - 0.903 0.779 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
26. PTPLA PTPLA 4044 4.239 0.913 0.900 - 0.737 - - - 0.789 0.900
27. neb ENSDARG00000032630, ENSDARG00000109273 19493 4.212 0.900 - 0.765 0.864 - - - 0.746 0.937 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
28. tnni2a.4 ENSDARG00000029069 122344 4.206 0.962 - 0.736 0.773 - - - 0.898 0.837 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
29. SYNPO2L SYNPO2L 6697 4.167 0.931 - 0.730 0.880 - - - 0.735 0.891
30. znf648 ENSDARG00000104823 1918 4.16 0.812 0.868 - 0.801 - - - 0.801 0.878 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
31. ptrfa ptrfa 4363 4.147 0.851 0.879 - 0.821 - - - 0.758 0.838
32. tnnt2d ENSDARG00000002988 7590 4.127 0.839 0.829 - 0.828 - - - 0.762 0.869 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
33. ank1 ank1 5209 4.113 0.923 0.757 0.720 - - - - 0.793 0.920
34. prx ENSDARG00000017246 6183 4.083 0.852 0.881 0.720 0.827 - - - - 0.803 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
35. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.08 0.886 0.774 - 0.818 - - - 0.719 0.883 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
36. tmem38a ENSDARG00000024047 41883 4.033 0.911 - 0.719 0.711 - 0.913 - 0.779 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
37. cfl2 ENSDARG00000014106 8051 3.975 0.831 0.921 0.747 0.755 - - - 0.721 - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
38. myl1 ENSDARG00000014196 98943 3.966 0.807 - 0.793 0.751 - 0.758 - 0.857 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
39. cacna2d1a ENSDARG00000014804 1924 3.875 0.884 0.746 - 0.725 - - - 0.743 0.777 calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
40. murcb murcb 13655 3.674 0.953 - 0.936 0.889 0.896 - - - -
41. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.476 0.869 0.895 - - - - - 0.806 0.906 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
42. jph2 ENSDARG00000028625 6706 3.467 0.877 - - 0.791 - - - 0.877 0.922 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
43. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 3.463 0.926 - 0.877 - - 0.750 - 0.910 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
44. pgam2 ENSDARG00000057571 23387 3.454 0.925 - 0.957 0.849 - - - 0.723 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
45. trdn ENSDARG00000041779 4283 3.44 0.889 0.949 0.737 - - - - - 0.865 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
46. pygma ENSDARG00000055518 15972 3.421 0.960 0.906 - - - - - 0.734 0.821 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
47. srl ENSDARG00000104587 11126 3.386 0.886 0.929 - 0.777 - - - 0.794 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
48. jph1a ENSDARG00000058603 2852 3.372 - 0.851 - 0.842 - - - 0.826 0.853 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
49. IGFN1 IGFN1 5030 3.337 0.846 0.839 - - - - - 0.796 0.856
50. myoz2a ENSDARG00000012311 1373 3.329 0.840 0.887 - 0.814 - - - - 0.788 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
51. cap2 ENSDARG00000104478 3266 3.319 0.870 0.796 - - - - - 0.787 0.866 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
52. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.311 0.876 0.898 0.751 0.786 - - - - -
53. znf106a ENSDARG00000016651 6049 3.308 0.850 0.856 - - - - - 0.729 0.873 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
54. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.306 0.821 - 0.764 - - - - 0.803 0.918 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
55. vcl vcl 6667 3.281 0.918 0.893 0.766 - - - - - 0.704
56. rtn2a ENSDARG00000016088 12184 3.276 0.920 - 0.706 0.818 - - - 0.832 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
57. myom1a ENSDARG00000061249 10230 3.255 - - 0.732 - 0.802 - - 0.846 0.875 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
58. eef2l2 ENSDARG00000035256 6815 3.252 0.894 0.845 0.741 0.772 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
59. MYOM1 MYOM1 3870 3.23 0.791 0.757 - - - - - 0.816 0.866
60. casq1b ENSDARG00000018105 2643 3.229 0.845 0.851 - - - - - 0.703 0.830 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
61. apobec2a ENSDARG00000018881 4790 3.223 0.838 0.906 - 0.741 - - - 0.738 - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
62. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 3.217 - - 0.724 0.870 - - - 0.765 0.858 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
63. mdh1b ENSDARG00000018008 3196 3.204 0.857 0.750 - 0.752 - - - - 0.845 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
64. fitm1 ENSDARG00000056464 1759 3.184 0.872 0.880 - - - - - 0.714 0.718 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
65. MYOM2_1 MYOM2_1 4054 3.159 - 0.757 - 0.795 - - - 0.766 0.841
66. casq2 ENSDARG00000008982 21802 3.154 0.961 - 0.708 0.783 - - - - 0.702 calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
67. gapdh ENSDARG00000043457 68684 3.121 0.736 - 0.708 0.877 - - - 0.800 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
68. sucla2 ENSDARG00000005359 5992 3.113 0.852 0.820 - - - - - 0.708 0.733 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
69. murca murca 6614 3.086 0.930 - 0.735 0.703 - - - - 0.718
70. ak1 ENSDARG00000001950 26964 2.996 0.755 - - 0.778 - 0.722 - 0.741 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
71. rtn2b ENSDARG00000057027 1391 2.981 - 0.744 - 0.787 - - - 0.710 0.740 reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
72. ucmab ENSDARG00000005485 1808 2.981 0.704 0.768 - - - - 0.749 - 0.760 upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
73. zgc:158296 ENSDARG00000070923 3935 2.978 - 0.817 0.716 0.720 - - - - 0.725 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
74. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.884 0.703 0.755 - 0.705 - - - - 0.721 cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
75. ryr1b ENSDARG00000023797 5693 2.673 - 0.919 - - - - - 0.844 0.910 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
76. C13H10orf71 3489 2.66 0.891 0.934 - - - - - - 0.835 chromosome 13 C10orf71 homolog
77. smyd1b ENSDARG00000091253 4964 2.649 0.951 0.918 - - 0.780 - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
78. AIMP1 ENSDARG00000060036 4136 2.644 0.895 0.937 - - - - - - 0.812 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
79. smyd2b ENSDARG00000005629 8181 2.628 0.888 0.905 - - - - - - 0.835 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
80. myod1 ENSDARG00000030110 6019 2.621 0.909 0.928 - - - - - - 0.784 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
81. NRAP ENSDARG00000009341 3565 2.609 0.877 0.890 - 0.842 - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
82. txlnbb ENSDARG00000076241 6396 2.602 0.950 0.925 - - - - - - 0.727 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
83. tmem161a ENSDARG00000012790 16094 2.595 0.972 - - 0.748 - - - - 0.875 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
84. pvalb1 ENSDARG00000037789 121195 2.581 - - - - 0.864 0.793 - 0.924 - parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
85. calm1b ENSDARG00000034187 13158 2.575 0.941 - 0.750 - - - 0.884 - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
86. actn3b ENSDARG00000001431 15747 2.572 0.957 0.902 - 0.713 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
87. atp2a1l ENSDARG00000035458 6222 2.547 - - - 0.829 - - - 0.828 0.890 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
88. EHBP1L1 EHBP1L1 2500 2.536 0.894 0.845 - 0.797 - - - - -
89. jph1b ENSDARG00000038826 7416 2.535 - 0.884 - 0.815 - - - 0.836 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
90. sh3bgr ENSDARG00000021633 3498 2.528 0.897 0.856 - - - - - - 0.775 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
91. chrna1 ENSDARG00000009021 2931 2.527 0.884 0.929 - 0.714 - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
92. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 2.527 0.919 - 0.775 0.833 - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
93. si:ch211-255p10.3 ENSDARG00000096616 8336 2.521 - - - 0.809 - - - 0.764 0.948 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
94. dtnba ENSDARG00000077694 5483 2.521 0.912 0.900 - 0.709 - - - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
95. eno3 ENSDARG00000039007 11355 2.52 - 0.842 - 0.780 - - - - 0.898 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
96. tmod4 ENSDARG00000020890 17436 2.512 - - 0.740 0.848 - - - - 0.924 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
97. BX530018.3 ENSDARG00000107022 614 2.504 0.856 0.852 - - - - - - 0.796
98. tgm2a ENSDARG00000070157 4516 2.48 0.928 - 0.725 - - - - - 0.827 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
99. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 2.479 0.804 - - - - - - 0.750 0.925 myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
100. CR392006.1 CR392006.1 1401 2.476 0.758 0.903 - - - - - - 0.815

There are 1329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA