Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-346o4.3

Gene Name Gene ID Reads Annotation
si:ch73-346o4.3 si:ch73-346o4.3 29










Genes with expression patterns similar to si:ch73-346o4.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-346o4.3 si:ch73-346o4.3 29 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. CABZ01038313.1 CABZ01038313.1 79 2.776 0.870 1.000 - - - - - 0.906 -
3. DNAJC14 ENSDARG00000105398 20 2.641 - 1.000 - - - - - 0.913 0.728 DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
4. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
5. vwc2 ENSDARG00000076495 22 2 - 1.000 - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
6. gpr88 24 2 - 1.000 - - - 1.000 - - - G protein-coupled receptor 88
7. PGBD4_5 PGBD4_5 16 1.921 0.921 1.000 - - - - - - -
8. spred3 ENSDARG00000040358 134 1.921 - 1.000 - - - 0.921 - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
9. zgc:113516 20 1.913 0.913 - - - - 1.000 - - - zgc:113516
10. dnajb2 ENSDARG00000058644 30 1.867 0.867 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
11. si:dkey-63d15.12 ENSDARG00000075480 9 1.854 - - - - - 1.000 - - 0.854 si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
12. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1.841 - - - - - 1.000 - 0.841 - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
13. gpr22 gpr22 115 1.819 - 1.000 - - - 0.819 - - -
14. PPAPDC3 PPAPDC3 14 1.815 - - - - - 1.000 - 0.815 -
15. CR847906.1 ENSDARG00000099493 88 1.795 - 1.000 - - - - - 0.795 - protein NLRC3-like [Source:NCBI gene;Acc:571651]
16. CT025914.2 CT025914.2 53 1.792 - - - - - 0.864 - - 0.928
17. cldnj ENSDARG00000058880 59 1.781 0.781 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
18. grm2a ENSDARG00000004150 64 1.771 - 1.000 - - - 0.771 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
19. Mar-09 Mar-09 126 1.768 - 1.000 - - - 0.768 - - -
20. si:ch211-274k16.6 si:ch211-274k16.6 26 1.764 - - - - - 1.000 - 0.764 -
21. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.748 0.858 - - - - - - 0.890 - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
22. PLA2R1 ENSDARG00000077474 45 1.746 0.851 - - - - - - 0.895 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
23. sgms2 57 1.741 - 1.000 - - - - - 0.741 - sphingomyelin synthase 2, transcript variant X1
24. si:ch211-243a22.1 si:ch211-243a22.1 42 1.738 - - - - - 1.000 - 0.738 -
25. nab2 ENSDARG00000078076 108 1.731 - - - - - 1.000 - 0.731 - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
26. LRP3 ENSDARG00000008485 1401 1.73 0.730 1.000 - - - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
27. slc5a1 ENSDARG00000013871 4 1.718 - - - - - 0.864 - - 0.854 solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
28. mdm1 ENSDARG00000045675 64 1.713 - 0.713 - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
29. foxb1a ENSDARG00000089042 101 1.704 - 0.704 - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
30. DPYD DPYD 52 1.682 0.921 - - - - 0.761 - - -
31. dfnb31a 166 1.582 - 0.817 - - - 0.765 - - - deafness, autosomal recessive 31a, transcript variant X3
32. faxcb ENSDARG00000078981 249 1.578 - 0.818 - - - 0.760 - - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
33. exosc4 ENSDARG00000103432 21 1.574 - - 0.854 - 0.720 - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
34. tnr ENSDARG00000020771 20 1.573 - 0.731 - - - - - 0.842 - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
35. AGAP2 ENSDARG00000099874 151 1.573 0.746 - - - - 0.827 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
36. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 1.572 - - - - - 0.794 - 0.778 - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
37. HYAL2_1 HYAL2_1 266 1.566 0.861 - - - - - - 0.705 -
38. ndufv3_1 ENSDARG00000090389 25 1.526 - - - - 0.720 - - - 0.806 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
39. gdf11 ENSDARG00000044924 534 1.433 - 0.713 - - - 0.720 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
40. CABZ01051641.1 CABZ01051641.1 0 1 - - - - - 1.000 - - -
41. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
42. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
43. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
44. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 - 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
45. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
46. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
47. slc6a11a ENSDARG00000074002 189 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
48. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
49. zgc:175284 ENSDARG00000078159 29 1 - - - - - 1.000 - - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
50. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
51. hid1b ENSDARG00000100583 35 1 - - - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
52. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
53. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
54. CR846080.4 CR846080.4 6 1 - - - - - 1.000 - - -
55. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
56. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - - 1.000 - - -
57. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
58. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
59. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
60. si:ch73-91k6.8 si:ch73-91k6.8 37 1 - 1.000 - - - - - - -
61. gpr12 ENSDARG00000062934 7 1 - - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
62. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
63. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
64. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
65. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
66. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
67. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
68. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
69. MSRA ENSDARG00000029587 30 1 - 1.000 - - - - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
70. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
71. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
72. pole2 ENSDARG00000100028 42 1 - - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
73. olig3 ENSDARG00000074253 84 1 - 1.000 - - - - - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
74. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
75. star ENSDARG00000006137 149 1 - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
76. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
77. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
78. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
79. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
80. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
81. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
82. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
83. pik3ap1 ENSDARG00000078285 23 1 - - - - - 1.000 - - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
84. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -
85. rnf165a ENSDARG00000077906 133 1 - - - - - 1.000 - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
86. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
87. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
88. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
89. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
90. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
91. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
92. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
93. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
94. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
95. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
96. mettl8 ENSDARG00000017359 36 1 - - - - - 1.000 - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
97. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 - 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
98. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
99. si:ch211-260c23.1 13 1 - - - - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
100. faim2a ENSDARG00000038784 39 1 - 1.000 - - - - - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]

There are 1136 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA