Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-343l4.3

Gene Name Gene ID Reads Annotation
si:ch73-343l4.3 ENSDARG00000092502 1 si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]










Genes with expression patterns similar to si:ch73-343l4.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RNF224 RNF224 5 1 - - - - 1.000 - - - -
2. cyp2ad2 ENSDARG00000021172 2 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
3. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - 1.000 - - - -
4. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - 1.000 - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
5. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - - - - 1.000 - - - -
6. ppapdc1a ppapdc1a 1 1 - - - - 1.000 - - - -
7. FRMPD1_2 FRMPD1_2 2 1 - - - - 1.000 - - - -
8. FMNL1 FMNL1 7 1 - - - - 1.000 - - - -
9. BX897747.3_1 BX897747.3_1 1 1 - - - - 1.000 - - - -
10. HELZ2 ENSDARG00000012600 2 1 - - - - 1.000 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
11. TMEM255B 1 1 - - - - 1.000 - - - - transmembrane protein 255B
12. SNORA30 SNORA30 1 1 - - - - 1.000 - - - -
13. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - 1.000 - - - -
14. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - 1.000 - - - -
15. zgc:66432 zgc:66432 16 1 - - - - 1.000 - - - -
16. BX465203.2 BX465203.2 23 1 - - - - 1.000 - - - -
17. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - 1.000 - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
18. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - 1.000 - - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
19. APOH APOH 2 1 - - - - 1.000 - - - -
20. si:ch211-283e2.7 19 1 - - - - 1.000 - - - - si:ch211-283e2.7, transcript variant X2
21. npas4a ENSDARG00000055752 5 1 - - - - 1.000 - - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
22. fstl3 ENSDARG00000025670 41 1 - - - - 1.000 - - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
23. bpnt1 ENSDARG00000043684 78 1 - - - - 1.000 - - - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
24. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - - - 1.000 - - - -
25. npnt ENSDARG00000018721 19 1 - - - - 1.000 - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
26. AL773596.2 AL773596.2 2 1 - - - - 1.000 - - - -
27. ANKRD27 ENSDARG00000089207 3 1 - - - - 1.000 - - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
28. jak3 ENSDARG00000010252 11 1 - - - - 1.000 - - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
29. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - 1.000 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
30. ENDOD1_2 ENDOD1_2 2 1 - - - - 1.000 - - - -
31. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - - - 1.000 - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
32. si:ch73-343l4.6 ENSDARG00000025547, ENSDARG00000095127 1 1 - - - - 1.000 - - - - si:ch73-343l4.6 [Source:ZFIN;Acc:ZDB-GENE-090313-158]
33. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - 1.000 - - - -
34. si:dkeyp-46h3.5 ENSDARG00000089515 1 1 - - - - 1.000 - - - - si:dkeyp-46h3.5 [Source:ZFIN;Acc:ZDB-GENE-060503-937]
35. PSMB11_1 PSMB11_1 2 1 - - - - 1.000 - - - -
36. CR384075.2 CR384075.2 1 1 - - - - 1.000 - - - -
37. si:dkey-61f9.2 2 1 - - - - 1.000 - - - - si:dkey-61f9.2
38. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - 1.000 - - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
39. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - 1.000 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
40. si:ch73-343l4.3 ENSDARG00000092502 1 1 - - - - 1.000 - - - - si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]
41. CABZ01074647.1 CABZ01074647.1 1 1 - - - - 1.000 - - - -
42. zgc:172014 ENSDARG00000101775 3 1 - - - - 1.000 - - - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
43. ZNF70_6 ZNF70_6 15 1 - - - - 1.000 - - - -
44. MFAP4_8 MFAP4_8 1 1 - - - - 1.000 - - - -
45. GPR82 GPR82 127 1 - - - - 1.000 - - - -
46. atm_1 ENSDARG00000002385 1 1 - - - - 1.000 - - - - ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
47. CU855711.1 ENSDARG00000088643 6 1 - - - - 1.000 - - - - legumain-like [Source:NCBI gene;Acc:108191752]
48. GABRA2_1 ENSDARG00000113737 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
49. hs3st4 ENSDARG00000052648 6 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
50. si:ch211-66k16.24 si:ch211-66k16.24 1 1 - - - - 1.000 - - - -
51. si:ch211-57m13.8 ENSDARG00000078271 1 1 - - - - 1.000 - - - - si:ch211-57m13.8 [Source:ZFIN;Acc:ZDB-GENE-110411-238]
52. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - 1.000 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
53. BX005410.2 BX005410.2 44 1 - - - - 1.000 - - - -
54. CT573253.1 CT573253.1 4 1 - - - - 1.000 - - - -
55. si:dkey-200c24.1 si:dkey-200c24.1 7 1 - - - - 1.000 - - - -
56. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - 1.000 - - - -
57. CU459012.3 ENSDARG00000109688 1 1 - - - - 1.000 - - - -
58. si:dkey-30g5.2 si:dkey-30g5.2 1 1 - - - - 1.000 - - - -
59. CABZ01083815.1 ENSDARG00000105488 4 0.981 - - - - 0.981 - - - -
60. MUC5AC_2 MUC5AC_2 5 0.978 - - - - 0.978 - - - -
61. gpr55a ENSDARG00000043447 12 0.978 - - - - 0.978 - - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
62. CHCHD5 ENSDARG00000091754 35 0.978 - - - - 0.978 - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
63. CABZ01079981.1 CABZ01079981.1 8 0.978 - - - - 0.978 - - - -
64. mstnb ENSDARG00000069133 3 0.97 - - - - 0.970 - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
65. arvcfa ENSDARG00000074329 53 0.966 - - - - 0.966 - - - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
66. casd1 ENSDARG00000023900 12 0.966 - - - - 0.966 - - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
67. si:ch211-280c16.2 si:ch211-280c16.2 1 0.96 - - - - 0.960 - - - -
68. si:dkey-19j7.4 si:dkey-19j7.4 1 0.96 - - - - 0.960 - - - -
69. FAM83F FAM83F 8 0.96 - - - - 0.960 - - - -
70. si:ch211-64c10.1 si:ch211-64c10.1 21 0.96 - - - - 0.960 - - - -
71. CR388416.2 CR388416.2 3 0.96 - - - - 0.960 - - - -
72. il4r il4r 75 0.96 - - - - 0.960 - - - -
73. slc30a2 ENSDARG00000021305 4 0.96 - - - - 0.960 - - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
74. CR388416.1 CR388416.1 3 0.953 - - - - 0.953 - - - -
75. entpd2a.1 ENSDARG00000035506 14 0.953 - - - - 0.953 - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
76. PLA2G4C_1 PLA2G4C_1 2 0.953 - - - - 0.953 - - - -
77. celf5 celf5 5 0.951 - - - - 0.951 - - - -
78. prox1b ENSDARG00000088810, ENSDARG00000113014 33 0.94 - - - - 0.940 - - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
79. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 0.929 - - - - 0.929 - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
80. il11b ENSDARG00000058557 17 0.925 - - - - 0.925 - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
81. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 0.916 - - - - 0.916 - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
82. FKBP15 FKBP15 15 0.916 - - - - 0.916 - - - -
83. si:ch73-366i20.25 si:ch73-366i20.25 6 0.916 - - - - 0.916 - - - -
84. PCDH10 PCDH10 7 0.912 - - - - 0.912 - - - -
85. hydin ENSDARG00000056764, ENSDARG00000114934 16 0.912 - - - - 0.912 - - - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
86. CT027762.3 CT027762.3 17 0.912 - - - - 0.912 - - - -
87. cabp4 ENSDARG00000008866 4 0.912 - - - - 0.912 - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]
88. ccdc85al ENSDARG00000005343 25 0.912 - - - - 0.912 - - - - coiled-coil domain containing 85A, like [Source:ZFIN;Acc:ZDB-GENE-040912-92]
89. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.907 - - - - 0.907 - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
90. IFITM10 IFITM10 4 0.907 - - - - 0.907 - - - -
91. ca4b ENSDARG00000042293 5 0.907 - - - - 0.907 - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
92. si:dkey-19a16.10 si:dkey-19a16.10 3 0.907 - - - - 0.907 - - - -
93. si:ch211-218m3.16 ENSDARG00000044336 33 0.907 - - - - 0.907 - - - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
94. si:dkey-176f19.7 ENSDARG00000103348 10 0.898 - - - - 0.898 - - - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
95. slc46a3 ENSDARG00000077313 14 0.898 - - - - 0.898 - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
96. zgc:153845 62 0.898 - - - - 0.898 - - - - zgc:153845
97. PEG3_27 PEG3_27 10 0.896 - - - - 0.896 - - - -
98. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 0.887 - - - - 0.887 - - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
99. chn1 ENSDARG00000101735 9 0.885 - - - - 0.885 - - - - chimerin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1934]
100. si:ch73-91k6.1 18 0.883 - - - - 0.883 - - - - si:ch73-91k6.1

There are 60 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA