Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-340m8.2

Gene Name Gene ID Reads Annotation
si:ch73-340m8.2 ENSDARG00000040258 2 si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]










Genes with expression patterns similar to si:ch73-340m8.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-340m8.2 ENSDARG00000040258 2 3 - - 1.000 1.000 - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
2. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1.757 - - 0.757 1.000 - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
3. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1.647 - - 0.845 0.802 - - - - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
4. slc5a12 ENSDARG00000005004 15 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
5. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
6. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
7. fshr ENSDARG00000071494, ENSDARG00000112820 3 1 - - - 1.000 - - - - - follicle stimulating hormone receptor [Source:ZFIN;Acc:ZDB-GENE-020423-5]
8. rdh1 ENSDARG00000017882 24 1 - - 1.000 - - - - - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
9. CABZ01010098.1 ENSDARG00000117245 1 1 - - 1.000 - - - - - -
10. C1RL C1RL 2 1 - - 1.000 - - - - - -
11. HDAC7 HDAC7 12 1 - - 1.000 - - - - - -
12. AL935186.2 ENSDARG00000097345 6 1 - - 1.000 - - - - - -
13. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - 1.000 - - - - - -
14. si:ch211-255g12.8 ENSDARG00000069627 22 1 - - 1.000 - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
15. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
16. gphb5 ENSDARG00000027472 8 1 - - - 1.000 - - - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
17. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
18. U1_37 U1_37 2 1 - - 1.000 - - - - - -
19. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
20. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - - - 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
21. wsb2 ENSDARG00000058608 11 1 - - 1.000 - - - - - - WD repeat and SOCS box containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-26]
22. psmb11 psmb11 5 1 - - - - - - - 1.000 -
23. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - 1.000 - - - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
24. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
25. CR388129.2 CR388129.2 1 1 - - - 1.000 - - - - -
26. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
27. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
28. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
29. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
30. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
31. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
32. rad9b ENSDARG00000075632 1 1 - - 1.000 - - - - - - RAD9 checkpoint clamp component B [Source:ZFIN;Acc:ZDB-GENE-040910-3]
33. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
34. KCNJ15 ENSDARG00000058988 18 1 - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
35. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
36. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
37. rnf126 ENSDARG00000104076 1 1 - - 1.000 - - - - - - ring finger protein 126 [Source:ZFIN;Acc:ZDB-GENE-070209-292]
38. si:dkey-22l1.1 ENSDARG00000096743 5 1 - - 1.000 - - - - - - si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
39. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
40. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
41. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
42. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
43. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
44. si:ch211-149o7.4 si:ch211-149o7.4 1 1 - - 1.000 - - - - - -
45. sult1st2 ENSDARG00000041540 1 1 - - 1.000 - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-27]
46. 5_8S_rRNA_3 5_8S_rRNA_3 2 1 - - 1.000 - - - - - -
47. fgf21 ENSDARG00000100846 19 1 - - 1.000 - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
48. BX323023.1 BX323023.1 1 1 - - 1.000 - - - - - -
49. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1
50. bmpr1ab ENSDARG00000105045 2 1 - - 1.000 - - - - - - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
51. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
52. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
53. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
54. CT737138.1 CT737138.1 26 1 - - 1.000 - - - - - -
55. CABZ01111936.1 CABZ01111936.1 1 1 - - 1.000 - - - - - -
56. MUC5AC_2 MUC5AC_2 5 1 - - - 1.000 - - - - -
57. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
58. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
59. MICALCL MICALCL 1 1 - - 1.000 - - - - - -
60. kcnq1 ENSDARG00000059798 11 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
61. si:dkey-115f9.3 7 1 - - - 1.000 - - - - - si:dkey-115f9.3, transcript variant X2
62. si:ch211-213i16.3 2 1 - - 1.000 - - - - - - si:ch211-213i16.3, transcript variant X1
63. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
64. CR735107.1 CR735107.1 6 1 - - 1.000 - - - - - -
65. slc1a9 ENSDARG00000098269 12 1 - - - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
66. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
67. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
68. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
69. BX664622.1 ENSDARG00000101754 39 1 - - - 1.000 - - - - -
70. CABZ01065328.1 ENSDARG00000090310 1 1 - - 1.000 - - - - - - CD48 antigen-like [Source:NCBI gene;Acc:100329398]
71. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
72. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
73. zgc:174224 ENSDARG00000093875 4 1 - - 1.000 - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
74. BX629350.1 BX629350.1 1 1 - - 1.000 - - - - - -
75. ttr ENSDARG00000037191 11 1 - - 1.000 - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
76. khk ENSDARG00000029874 43 1 - - 1.000 - - - - - - ketohexokinase [Source:ZFIN;Acc:ZDB-GENE-040718-381]
77. pls1 ENSDARG00000039272 39 1 - - 1.000 - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
78. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
79. BX682234.3 BX682234.3 7 1 - - - 1.000 - - - - -
80. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
81. ADAD2 ENSDARG00000105626 6 1 - - - 1.000 - - - - - adenosine deaminase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-130530-788]
82. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
83. si:dkey-260c8.5 si:dkey-260c8.5 8 1 - - - 1.000 - - - - -
84. ITIH4 ITIH4 9 1 - - 1.000 - - - - - -
85. BX897747.2 BX897747.2 1 1 - - 1.000 - - - - - -
86. clec3ba ENSDARG00000076541 3 1 - - - - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
87. hs3st2 ENSDARG00000059616 2 1 - - 1.000 - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
88. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
89. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
90. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
91. si:dkey-163m14.6 5 1 - - - 1.000 - - - - - si:dkey-163m14.6
92. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
93. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
94. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
95. si:ch211-212i14.2 si:ch211-212i14.2 9 1 - - 1.000 - - - - - -
96. U1_8 U1_8 1 1 - - 1.000 - - - - - -
97. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - 1.000 - - - - -
98. BX004785.2 ENSDARG00000093487 10 1 - - 1.000 - - - - - -
99. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
100. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]

There are 149 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA