Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-308m11.1

Gene Name Gene ID Reads Annotation
si:ch73-308m11.1 54 si:ch73-308m11.1










Genes with expression patterns similar to si:ch73-308m11.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-308m11.1 54 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 si:ch73-308m11.1
2. rorb ENSDARG00000033498 544 0.911 - - - - - - 0.911 - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
3. chst2a ENSDARG00000075007 726 0.906 - 0.906 - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a [Source:ZFIN;Acc:ZDB-GENE-060929-40]
4. ogg1 ENSDARG00000060002 114 0.892 - - - - - - 0.892 - - 8-oxoguanine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070112-932]
5. drd1b ENSDARG00000038918 113 0.891 - - - - - - 0.891 - - dopamine receptor D1b [Source:ZFIN;Acc:ZDB-GENE-070524-2]
6. ENSDARG00000076021 ENSDARG00000076021 162 0.886 - - - - - - 0.886 - -
7. SERTAD4 ENSDARG00000089795 791 0.885 - - - - - - 0.885 - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
8. zgc:193682 zgc:193682 15 0.882 - - - - - - 0.882 - -
9. krit1 ENSDARG00000098916 431 0.878 - - - - - - 0.878 - - KRIT1, ankyrin repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-555]
10. actr8 ENSDARG00000103610 367 0.867 - - - - - - 0.867 - - ARP8 actin related protein 8 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5065]
11. GAS2L1 ENSDARG00000078803 315 0.862 - - - - - - 0.862 - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
12. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 0.856 - - - - 0.856 - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
13. lrrc8db ENSDARG00000103840 606 0.855 - - - - - - 0.855 - - leucine rich repeat containing 8 VRAC subunit Db [Source:ZFIN;Acc:ZDB-GENE-061013-487]
14. glb1 ENSDARG00000036415 80 0.848 - - - - - - 0.848 - - galactosidase, beta 1 [Source:ZFIN;Acc:ZDB-GENE-050410-9]
15. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.844 - - - - - - 0.844 - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
16. BX927282.2 ENSDARG00000096925 221 0.841 - 0.841 - - - - - - -
17. FEZ2_1 FEZ2_1 153 0.836 - 0.836 - - - - - - -
18. si:rp71-36d5.4 si:rp71-36d5.4 20 0.833 - - - - 0.833 - - - -
19. mpp7 mpp7 743 0.833 - - - - - - 0.833 - -
20. cbx6a ENSDARG00000071051 379 0.832 - - - - - - 0.832 - - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
21. si:dkeyp-33e11.3 si:dkeyp-33e11.3 306 0.832 - - - - - - 0.832 - -
22. fasn_1 ENSDARG00000087657 31 0.832 - - - - 0.832 - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
23. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.831 - - - - - - 0.831 - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
24. cstf2 ENSDARG00000090788 170 0.83 - - - - - - 0.830 - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
25. CCDC61 ENSDARG00000062307 582 0.83 - - - - - - 0.830 - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
26. dlgap1b ENSDARG00000037415 658 0.828 - 0.828 - - - - - - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
27. CABZ01087514.1 ENSDARG00000090861 245 0.824 - 0.824 - - - - - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
28. ISM2 ISM2 1710 0.819 - - - - - - 0.819 - -
29. cmah ENSDARG00000057714 852 0.816 - - - - - - 0.816 - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
30. eltd1 eltd1 295 0.815 - 0.815 - - - - - - -
31. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 0.812 - 0.812 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
32. ca4c ENSDARG00000044512 102 0.81 - - - - 0.810 - - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
33. git2a ENSDARG00000061915 884 0.808 - 0.808 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
34. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 0.806 - - - - - - 0.806 - - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
35. CCDC80 ENSDARG00000000002 413 0.805 - 0.805 - - - - - - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
36. si:dkey-68l7.1 si:dkey-68l7.1 159 0.804 - 0.804 - - - - - - -
37. sfxn1 ENSDARG00000019963 1689 0.804 - - - - - - 0.804 - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
38. adamts9 ENSDARG00000077778 419 0.803 - - - - - - 0.803 - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
39. wtip ENSDARG00000103607 797 0.796 - - - - - - 0.796 - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
40. myf6 ENSDARG00000029830 1911 0.795 - 0.795 - - - - - - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
41. HERC4 ENSDARG00000059936 369 0.793 - 0.793 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
42. cx32.3 ENSDARG00000041787 33 0.793 - - - - - - - - 0.793 connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
43. si:ch73-234b20.4 112 0.787 - 0.787 - - - - - - - si:ch73-234b20.4, transcript variant X1
44. mysm1 ENSDARG00000034693 291 0.787 - - - - - - 0.787 - - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
45. SNAP23_1 SNAP23_1 613 0.787 - - - - - - 0.787 - -
46. cyp2aa1 ENSDARG00000099003 297 0.787 - - - - - - 0.787 - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
47. ccdc82 ENSDARG00000014966 563 0.786 - 0.786 - - - - - - - coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
48. sec22bb_1 ENSDARG00000100435 57 0.785 - 0.785 - - - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
49. tsku ENSDARG00000040815 631 0.784 - - - - - - 0.784 - - tsukushi small leucine rich proteoglycan homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-4683]
50. si:ch211-190k17.31 si:ch211-190k17.31 29 0.784 - - - - - - 0.784 - -
51. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.781 - - - - - - 0.781 - - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
52. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.781 - - - - - - 0.781 - - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
53. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.781 - 0.781 - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
54. CU457815.1 ENSDARG00000115823 1005 0.779 - 0.779 - - - - - - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
55. il11ra ENSDARG00000026736 83 0.779 - - - - - - 0.779 - - interleukin 11 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5942]
56. kcnc1a ENSDARG00000051852 317 0.779 - - - - - - 0.779 - - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
57. pik3r4 ENSDARG00000060469 381 0.779 - - - - - - 0.779 - - phosphoinositide-3-kinase, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050309-84]
58. sema6e ENSDARG00000000189 35 0.778 - - - - - - 0.778 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
59. cib2 ENSDARG00000102820 296 0.777 - 0.777 - - - - - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
60. METRNL 166 0.776 - 0.776 - - - - - - - meteorin, glial cell differentiation regulator-like
61. gpr78 gpr78 135 0.776 - 0.776 - - - - - - -
62. tvp23b ENSDARG00000057060 361 0.776 - - - - 0.776 - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
63. zgc:154006 ENSDARG00000061797 152 0.774 - - - - - - 0.774 - - zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
64. hps3 ENSDARG00000015749 481 0.774 - - - - - - 0.774 - - Hermansky-Pudlak syndrome 3 [Source:ZFIN;Acc:ZDB-GENE-061110-115]
65. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 0.773 - - - - - - 0.773 - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
66. CU929089.1 CU929089.1 479 0.773 - - - - - - 0.773 - -
67. si:ch73-269m14.3 ENSDARG00000096305 28 0.772 - 0.772 - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
68. si:ch211-160d14.11 si:ch211-160d14.11 2 0.772 - - - - - - 0.772 - -
69. marveld2b ENSDARG00000061651 459 0.772 - - - - - - 0.772 - - MARVEL domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-050208-54]
70. pdzd3b ENSDARG00000055656 3 0.772 - - - - - - 0.772 - - PDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081022-151]
71. zgc:173480 171 0.772 - 0.772 - - - - - - - zgc:173480
72. KRT222 ENSDARG00000071518 767 0.771 - - - - - - 0.771 - - keratin 222 [Source:ZFIN;Acc:ZDB-GENE-070912-343]
73. pax3b ENSDARG00000028348 388 0.77 - 0.770 - - - - - - - paired box 3b [Source:ZFIN;Acc:ZDB-GENE-080917-53]
74. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.769 - - - - - - 0.769 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
75. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 0.768 - - - - - - 0.768 - - forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
76. adprm ENSDARG00000026090 91 0.768 - - - - - - 0.768 - - ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent [Source:ZFIN;Acc:ZDB-GENE-040426-1406]
77. mov10a ENSDARG00000015829 566 0.766 - - - - - - 0.766 - - Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
78. map2k2b ENSDARG00000068918 676 0.765 - - - - - - 0.765 - - mitogen-activated protein kinase kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080219-34]
79. cyp27a7 ENSDARG00000033802 216 0.764 - - - - - - 0.764 - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
80. CABZ01067657.1 ENSDARG00000117241 245 0.764 - - - - - - 0.764 - -
81. si:dkey-260c8.6 ENSDARG00000096233 60 0.763 - 0.763 - - - - - - - si:dkey-260c8.6 [Source:ZFIN;Acc:ZDB-GENE-120215-121]
82. atp6v0b ENSDARG00000031681 4611 0.762 - - - - - - 0.762 - - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
83. si:dkey-209n16.2 ENSDARG00000095914 27 0.761 - - - - - - 0.761 - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
84. depdc7 232 0.761 - - - - - - 0.761 - - DEP domain containing 7, transcript variant X1
85. pdk3b ENSDARG00000099791 50 0.759 - - - - - - 0.759 - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
86. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 0.758 - - - - - - 0.758 - - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
87. TMEM71 TMEM71 696 0.758 - - - - - - 0.758 - -
88. prex1 ENSDARG00000075793 1017 0.757 - 0.757 - - - - - - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]
89. spag9a ENSDARG00000074531 1195 0.757 - - - - - - 0.757 - - sperm associated antigen 9a [Source:ZFIN;Acc:ZDB-GENE-070820-7]
90. esrrgb ENSDARG00000011696 108 0.755 - - - - - - 0.755 - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
91. tmem8c 10 0.754 - 0.754 - - - - - - - transmembrane protein 8C, transcript variant X1
92. irx1a ENSDARG00000101831 644 0.753 - 0.753 - - - - - - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
93. gys2 ENSDARG00000004904 212 0.753 - - - - - - 0.753 - - glycogen synthase 2 [Source:ZFIN;Acc:ZDB-GENE-030826-31]
94. CU467646.1_1 ENSDARG00000075090 128 0.752 - 0.752 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
95. si:ch211-139n6.3 ENSDARG00000093230 147 0.751 - - - - - - 0.751 - - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
96. hoxc13a ENSDARG00000070353 4815 0.75 - - - - - - 0.750 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
97. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.749 - - - - - - 0.749 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
98. gtf3aa ENSDARG00000030267 217 0.747 - 0.747 - - - - - - - general transcription factor IIIAa [Source:ZFIN;Acc:ZDB-GENE-041006-1]
99. PSMG4 1007 0.746 - 0.746 - - - - - - - proteasome (prosome, macropain) assembly chaperone 4
100. cldn17 ENSDARG00000099950 14 0.746 - - - - - - 0.746 - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA