Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-289h5.3

Gene Name Gene ID Reads Annotation
si:ch73-289h5.3 si:ch73-289h5.3 9










Genes with expression patterns similar to si:ch73-289h5.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-289h5.3 si:ch73-289h5.3 9 5 1.000 1.000 1.000 - 1.000 - - 1.000 -
2. BX000442.2 BX000442.2 8 2 1.000 - - - 1.000 - - - -
3. trim35-38 trim35-38 3 1.993 - - 0.993 - 1.000 - - - -
4. fbxl8 ENSDARG00000054222 3 1.894 - 0.894 - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
5. slc17a9a ENSDARG00000042954 36 1.878 0.984 0.894 - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
6. npy8br ENSDARG00000005780 15 1.782 - - 0.836 - - - - 0.946 - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
7. ZNF337_6 ZNF337_6 898 1.771 0.914 0.857 - - - - - - -
8. si:dkey-181m9.8 ENSDARG00000078267 123 1.756 0.928 0.828 - - - - - - - si:dkey-181m9.8 [Source:ZFIN;Acc:ZDB-GENE-070912-399]
9. neurod6a ENSDARG00000040008 17 1.629 - - - - 0.872 - - 0.757 - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
10. cyp2p6 ENSDARG00000042978 46 1.558 - 0.722 0.836 - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
11. cttn ENSDARG00000011777 19 1.552 - 0.726 - - 0.826 - - - - cortactin [Source:ZFIN;Acc:ZDB-GENE-040715-3]
12. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
13. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
14. CABZ01034089.1 ENSDARG00000107106 0 1 - - - - - - - 1.000 -
15. or111-1 ENSDARG00000041030 1 1 - - - - - - - 1.000 - odorant receptor, family D, subfamily 111, member 1 [Source:ZFIN;Acc:ZDB-GENE-000329-16]
16. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
17. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
18. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
19. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
20. illr1 ENSDARG00000059254 1 1 - - - - - - - 1.000 - immune-related, lectin-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050311-2]
21. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
22. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
23. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
24. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
25. or125-8 ENSDARG00000056940 1 1 - - - - - - - 1.000 - odorant receptor, family E, subfamily 125, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-98]
26. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
27. grin2da ENSDARG00000086207 28 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
28. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
29. adcy3b ENSDARG00000017437 8 1 - - - - - - - 1.000 - adenylate cyclase 3b [Source:ZFIN;Acc:ZDB-GENE-041014-276]
30. mgrn1b ENSDARG00000004796 18 1 - - - - - - - 1.000 - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
31. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
32. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
33. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - - 1.000 -
34. or109-13 ENSDARG00000101588 1 1 - - - - - - - 1.000 - odorant receptor, family D, subfamily 109, member 13 [Source:ZFIN;Acc:ZDB-GENE-070806-75]
35. CABZ01012857.1 CABZ01012857.1 78 1 1.000 - - - - - - - -
36. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
37. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
38. or115-12 ENSDARG00000044748 2 1 - - - - - - - 1.000 - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
39. crfb12 ENSDARG00000052413 47 1 1.000 - - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
40. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
41. v2rl1 ENSDARG00000005942 1 1 - - - - - - - 1.000 - vomeronasal 2 receptor, l1 [Source:ZFIN;Acc:ZDB-GENE-050419-65]
42. U1_18 U1_18 0 1 - - - - 1.000 - - - -
43. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
44. acta2 ENSDARG00000045180 96 1 1.000 - - - - - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
45. DPEP3 DPEP3 53 1 - - - - - - - 1.000 -
46. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
47. si:ch211-238p8.24 ENSDARG00000086732 0 1 - - - - - - - 1.000 - si:ch211-238p8.24 [Source:ZFIN;Acc:ZDB-GENE-091118-22]
48. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
49. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
50. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
51. F13A1 F13A1 1 1 - - - - 1.000 - - - -
52. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
53. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
54. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
55. CR759920.1 CR759920.1 4 1 - - - - - - - 1.000 -
56. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
57. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
58. THBS1_1 THBS1_1 6 1 1.000 - - - - - - - -
59. BRSK2_2 BRSK2_2 3 1 - - - - - - - 1.000 -
60. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
61. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
62. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - - - - - 1.000 - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
63. PDE9A_1 PDE9A_1 1 1 - - - - - - - 1.000 -
64. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
65. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
66. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
67. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
68. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 - 1.000 - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
69. CST7 CST7 22 1 - - - - 1.000 - - - -
70. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
71. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
72. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
73. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
74. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
75. tbxas1 ENSDARG00000002249 55 1 1.000 - - - - - - - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
76. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - - - - - - 1.000 -
77. CCDC57_1 CCDC57_1 35 1 - - - - - - - 1.000 -
78. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
79. zgc:136254 ENSDARG00000068465 27 1 - - - - - - - 1.000 - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
80. PEG3_9 PEG3_9 3 1 - - - - - - - 1.000 -
81. cart4 ENSDARG00000070142 55 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
82. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
83. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
84. taar14f ENSDARG00000088859, ENSDARG00000114926 1 1 - - - - - - - 1.000 - trace amine associated receptor 14f [Source:ZFIN;Acc:ZDB-GENE-041210-313]
85. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
86. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 1.000 - - - - - - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
87. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
88. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
89. CU915534.1 ENSDARG00000105830 1 1 - - - - - - - 1.000 -
90. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
91. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
92. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
93. BIN1 BIN1 11 1 - - - - 1.000 - - - -
94. CDH24_1 CDH24_1 7 1 - - - - - - - 1.000 -
95. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
96. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
97. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1 - 1.000 - - - - - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
98. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
99. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
100. fut9d ENSDARG00000028098 427 1 1.000 - - - - - - - - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA