Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-27e22.5

Gene Name Gene ID Reads Annotation
si:ch73-27e22.5 si:ch73-27e22.5 10










Genes with expression patterns similar to si:ch73-27e22.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-27e22.5 si:ch73-27e22.5 10 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. slc37a1 ENSDARG00000086103 16 2.615 - - - - 0.999 0.826 - 0.790 - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
3. si:dkey-121j17.5 ENSDARG00000014232 18 2 - - - - - 1.000 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
4. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 2 - - - - - 1.000 - 1.000 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
5. PIK3CA ENSDARG00000075456 39 2 1.000 - - - - 1.000 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
6. dand5 ENSDARG00000036471 8 2 - - - - - - 1.000 1.000 - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
7. si:ch211-203b20.4 ENSDARG00000091790 3 2 - - - - - 1.000 1.000 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
8. ankrd1b ENSDARG00000076192 204 2 1.000 - - - 1.000 - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
9. VSIG10L ENSDARG00000089237 12 2 - - - - - 1.000 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
10. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 2 - - - - - 1.000 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
11. ZNF337_23 ZNF337_23 39 2 - - - - - 1.000 1.000 - -
12. CABZ01079015.1 CABZ01079015.1 10 1.967 1.000 - - - 0.967 - - - -
13. CR759907.3 CR759907.3 3 1.961 - - 0.961 - - - 1.000 - -
14. dnah7 ENSDARG00000060165 21 1.95 - - - - 0.950 - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
15. crx ENSDARG00000011989, ENSDARG00000113850 330 1.935 - - 0.935 - - 1.000 - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
16. sftpbb ENSDARG00000067566 13 1.935 - - 0.935 - - 1.000 - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
17. snoU13 snoU13 2 1.935 1.000 - 0.935 - - - - - -
18. plp1b ENSDARG00000011929 8 1.935 - - 0.935 - - 1.000 - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
19. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1.935 1.000 - 0.935 - - - - - -
20. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.923 - - - - - 1.000 0.923 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
21. CABZ01087025.1 ENSDARG00000117232 10 1.918 - - 0.935 0.983 - - - - -
22. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.914 - - - - - 0.948 0.966 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
23. klf9 ENSDARG00000068194 5 1.881 - - 0.935 0.946 - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
24. GBF1 ENSDARG00000027016 30 1.868 - - - - 0.868 - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
25. OTOG ENSDARG00000068460 60 1.865 1.000 - - - - - 0.865 - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
26. si:dkey-242e21.3 ENSDARG00000075723 77 1.85 1.000 - - - - - 0.850 - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
27. TTC18 TTC18 58 1.822 - - - - - 0.941 0.881 - -
28. CU570691.1 ENSDARG00000088908 5 1.816 - - - - - 1.000 - - 0.816
29. ATP13A5 ATP13A5 13 1.816 1.000 - - - - - - - 0.816
30. aox1 aox1 14 1.785 - - - - - 0.785 1.000 - -
31. glipr1b ENSDARG00000030078 73 1.782 1.000 - - - 0.782 - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
32. adgb ENSDARG00000005595 118 1.766 - - - - - 0.880 0.886 - - androglobin [Source:ZFIN;Acc:ZDB-GENE-041001-205]
33. ripply3 ENSDARG00000036974 30 1.754 - - - - - 0.754 1.000 - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
34. pde6g 8 1.745 - - 0.745 - - - - 1.000 - phosphodiesterase 6G, cGMP-specific, rod, gamma
35. xkr8.1 ENSDARG00000004498 18 1.743 - - - 0.884 - 0.859 - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
36. ribc1 ENSDARG00000055739 32 1.739 - - - - - 1.000 0.739 - - RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
37. si:dkey-30c15.12 ENSDARG00000058546 12 1.735 - - 0.735 - 1.000 - - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
38. rx3 ENSDARG00000052893 43 1.729 - - - - - - 1.000 0.729 - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
39. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 1.724 - - - - 0.969 - - - 0.755 hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
40. abch1 ENSDARG00000071341 1 1.718 - - 0.718 - - 1.000 - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
41. gucy2f ENSDARG00000025504 6 1.718 - - 0.718 - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
42. rprma ENSDARG00000053383 12 1.712 - - 0.712 - - - 1.000 - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
43. ak7a ENSDARG00000019001 71 1.707 - - - - - 0.850 0.857 - - adenylate kinase 7a [Source:ZFIN;Acc:ZDB-GENE-040724-122]
44. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 1.687 - - 0.935 - 0.752 - - - - Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
45. si:ch1073-185p12.2 ENSDARG00000100199 7 1.676 - - - - - - 0.881 - 0.795 si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
46. BAIAP2L2 BAIAP2L2 31 1.644 - - - - 0.870 0.774 - - -
47. apbb1ip ENSDARG00000016505 224 1.581 - - - - 0.752 0.829 - - - amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1318]
48. zgc:92594 ENSDARG00000089517 83 1.579 0.782 - - - - - 0.797 - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
49. mif4gda ENSDARG00000102080, ENSDARG00000115033, ENSDARG00000117121 198 1.577 - - - - - 0.859 0.718 - - MIF4G domain containing a [Source:ZFIN;Acc:ZDB-GENE-040426-1382]
50. slc24a1 ENSDARG00000041431 33 1.565 - - - - - 0.782 0.783 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
51. or115-14 ENSDARG00000094235 17 1.56 - - 0.701 - - 0.859 - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
52. ankmy1 ENSDARG00000062702 52 1.556 - - - - - - 0.740 - 0.816 ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
53. CABZ01066439.2 CABZ01066439.2 5 1.545 - - - 0.729 - - - - 0.816
54. CCDC83 ENSDARG00000077179 29 1.527 0.734 - - - - 0.793 - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
55. slc8a4b ENSDARG00000037145 46 1.525 - - 0.805 - - 0.720 - - - solute carrier family 8 (sodium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-050809-103]
56. AL929252.1 AL929252.1 81 1.516 0.733 - - 0.783 - - - - -
57. CABZ01074181.1 CABZ01074181.1 396 1.487 - - - - - 0.715 0.772 - -
58. si:dkey-103d23.5 26 1.426 - - - - - - 0.718 - 0.708 si:dkey-103d23.5
59. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
60. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
61. ttr ENSDARG00000037191 11 1 1.000 - - - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
62. ca14 ENSDARG00000061697 1 1 - - - - - - - 1.000 - carbonic anhydrase XIV [Source:ZFIN;Acc:ZDB-GENE-051030-57]
63. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
64. msh6 ENSDARG00000104541 197 1 - - - - - 1.000 - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
65. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - - - - - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
66. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
67. SCN1B SCN1B 191 1 1.000 - - - - - - - -
68. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
69. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
70. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - - 1.000 - - -
71. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
72. diaph3 ENSDARG00000090785 16 1 - - - - - 1.000 - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
73. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
74. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - - - 1.000 - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
75. cfhl3 ENSDARG00000104205, ENSDARG00000115822 1 1 - - - - - - 1.000 - - complement factor H like 3 [Source:ZFIN;Acc:ZDB-GENE-050208-423]
76. rnf217 ENSDARG00000060944 10 1 - - - - - 1.000 - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
77. U6_27 U6_27 1 1 - - - - - - 1.000 - -
78. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
79. RGS14 RGS14 15 1 - - - - - - 1.000 - -
80. crygm2d13 ENSDARG00000057460 1093 1 - - - - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
81. zgc:174153 ENSDARG00000079376 12007 1 - - - - - - 1.000 - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
82. phc3 ENSDARG00000074604 2 1 - - - - - - - 1.000 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
83. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
84. adcy1a ENSDARG00000069026 1 1 - - - - - - 1.000 - - adenylate cyclase 1a [Source:ZFIN;Acc:ZDB-GENE-070705-302]
85. CU633740.1 CU633740.1 8 1 - - - - - 1.000 - - -
86. CR942805.3 CR942805.3 7 1 - - - - - - 1.000 - -
87. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - - - 1.000 - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]
88. cx52.9 ENSDARG00000086453 7 1 - - - - - - - 1.000 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
89. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
90. rspo4 ENSDARG00000038593 3 1 - - - - - 1.000 - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
91. si:ch1073-403i13.1 si:ch1073-403i13.1 1 1 - - - - - - - 1.000 -
92. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - - - - 1.000 - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
93. si:dkey-105f21.1 si:dkey-105f21.1 5 1 - - - - - 1.000 - - -
94. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
95. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
96. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
97. FAM155A ENSDARG00000075858 1 1 - - - - - 1.000 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
98. BX682552.2_1 BX682552.2_1 37 1 - - - - - 1.000 - - -
99. si:dkey-164n2.1 47 1 - - - - - - - 1.000 - si:dkey-164n2.1, transcript variant X1
100. zgc:103559 ENSDARG00000038293 1 1 - - - - - 1.000 - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]

There are 1377 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA