Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-265d7.2

Gene Name Gene ID Reads Annotation
si:ch73-265d7.2 ENSDARG00000116713 2142 si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]










Genes with expression patterns similar to si:ch73-265d7.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-265d7.2 ENSDARG00000116713 2142 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
2. nkx6.1 ENSDARG00000022569 3779 2.875 0.917 - - - - 0.972 0.986 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
3. ADAMTS3 ENSDARG00000060127 2839 2.843 0.981 - - - - 0.913 0.949 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
4. zgc:113531 ENSDARG00000038794 2063 2.803 0.947 - - - - 0.883 0.973 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
5. mnx2a ENSDARG00000042106 939 2.794 0.937 - - - - 0.896 0.961 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
6. pkd2l1 ENSDARG00000022503 372 2.787 0.907 - - - - 0.949 0.931 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
7. fabp7a ENSDARG00000007697 5211 2.75 - 0.972 - - - 0.864 0.914 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
8. nkx2.2a ENSDARG00000053298 747 2.712 0.881 - - - - 0.962 0.869 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
9. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 2.675 0.909 - - - - 0.866 0.900 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
10. olig2 ENSDARG00000040946 1405 2.657 0.809 - - - - 0.929 0.919 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
11. nkx6.2 ENSDARG00000104735 5081 2.652 0.820 - - - - 0.931 0.901 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
12. CU928222.1 ENSDARG00000097436 1662 2.631 0.803 - - - - 0.886 0.942 - -
13. pkd1b ENSDARG00000033029 461 2.629 0.845 - - - - 0.830 0.954 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
14. nkx2.2b ENSDARG00000101549 266 2.616 0.821 - - - - 0.916 0.879 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
15. sst1.1 ENSDARG00000040799 677 2.604 0.794 - - - - 0.936 0.874 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
16. hectd2 ENSDARG00000061194 559 2.603 0.780 - - - - 0.856 0.967 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
17. cdkl1 ENSDARG00000017329 3345 2.594 0.924 - - - - 0.793 0.877 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
18. im:7162084 im:7162084 665 2.592 0.922 - - - - 0.794 0.876 - -
19. SLC5A7 SLC5A7 453 2.591 0.817 - - - - 0.946 0.828 - -
20. BX511121.1 ENSDARG00000029997 1774 2.588 0.836 - - - - 0.789 0.963 - -
21. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 2.551 0.812 - - - - 0.847 0.892 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
22. chat chat 463 2.55 0.858 - - - - 0.766 0.926 - -
23. scg2a 800 2.55 0.816 - - - - 0.789 0.945 - - secretogranin II (chromogranin C) a
24. nkx2.9 ENSDARG00000020332 357 2.533 0.888 - - - - 0.820 0.825 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
25. hnrnpa3 ENSDARG00000059351 453 2.529 0.804 - - - - 0.894 0.831 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
26. urp2 ENSDARG00000067781 85 2.495 0.875 - - - - 0.853 0.767 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
27. cyr61l2 ENSDARG00000099985 725 2.491 0.808 - - - - 0.817 0.866 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
28. vim ENSDARG00000010008 3551 2.488 0.741 - - - - 0.762 0.985 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
29. gad2 ENSDARG00000015537 724 2.484 0.890 - - - - 0.754 0.840 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
30. wnt4a ENSDARG00000071208 1157 2.479 - - 0.719 - - 0.856 0.904 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
31. calca ENSDARG00000056590 150 2.478 0.747 - - - - 0.849 0.882 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
32. gad1b ENSDARG00000027419 440 2.472 0.806 - - - - 0.783 0.883 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
33. mnx2b ENSDARG00000030350 484 2.467 0.741 - - - - 0.758 0.968 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
34. sema3c ENSDARG00000034300 881 2.456 0.837 - - - - 0.799 0.820 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
35. CDK5R1 CDK5R1 562 2.454 0.720 - - - - 0.743 0.991 - -
36. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.445 0.812 - - - - 0.762 0.871 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
37. kif5c ENSDARG00000076027 424 2.433 0.813 - - - - 0.825 0.795 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
38. prdm8 ENSDARG00000025017 370 2.405 0.722 - - - - 0.833 0.850 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
39. MSMP ENSDARG00000105581 254 2.369 0.905 - - - - 0.747 0.717 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
40. her12 ENSDARG00000032963 754 2.365 0.711 - - - - 0.746 0.908 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
41. fyna ENSDARG00000011370 1679 2.351 0.773 - - - - 0.730 0.848 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
42. slc18a3a ENSDARG00000006356 1285 2.338 0.708 - - - - 0.725 0.905 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
43. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 2.337 0.784 - - - - 0.841 0.712 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
44. CABZ01021538.1 CABZ01021538.1 67 2.314 0.743 - - - - 0.809 0.762 - -
45. NPPC ENSDARG00000068126 45 2.296 0.708 - - - - 0.754 0.834 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
46. SPTBN4_1 ENSDARG00000092624 473 2.244 0.831 - - - - 0.707 0.706 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
47. ank2b ENSDARG00000043313 3065 2.205 0.765 - - - - 0.731 0.709 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
48. gpr98 gpr98 717 1.884 - - - - - 0.924 0.960 - -
49. SSX2IP SSX2IP 316 1.875 - - - - - 0.910 0.965 - -
50. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.871 0.951 - - - - - 0.920 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
51. notch1b ENSDARG00000052094 7874 1.861 - 0.998 - - - - 0.863 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
52. tubb5 ENSDARG00000037997 18691 1.858 - 0.998 - - - - 0.860 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
53. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.846 0.871 - - - - - 0.975 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
54. si:dkey-169l5.3 si:dkey-169l5.3 239 1.805 - - - - - 0.905 0.900 - -
55. gria2b ENSDARG00000052765 188 1.805 - - - - - 0.821 0.984 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
56. CABZ01029738.1 CABZ01029738.1 327 1.795 - - - - - 0.861 0.934 - -
57. st18 663 1.791 0.858 - - - - - 0.933 - - suppression of tumorigenicity 18, zinc finger
58. CABZ01080599.2 CABZ01080599.2 192 1.789 - - - - - 0.911 0.878 - -
59. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.789 - 0.999 - - - - 0.790 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
60. neurod neurod 1189 1.782 - - - - - 0.887 0.895 - -
61. insm1a ENSDARG00000091756 1838 1.78 0.827 - - - - - 0.953 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
62. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.776 - - - - - 0.804 0.972 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
63. chrm3a ENSDARG00000071091 72 1.776 - - - - - 0.822 0.954 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
64. gfra3 ENSDARG00000087704 122 1.773 - - - - - 0.908 0.865 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
65. crb1 ENSDARG00000100506, ENSDARG00000110621 373 1.773 0.907 - - - - - 0.866 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
66. pbx3a ENSDARG00000089262 97 1.771 - - - - - 0.841 0.930 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
67. atp1b4 ENSDARG00000053262 1337 1.77 0.789 - - - - - 0.981 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
68. ascl1a ENSDARG00000038386 1290 1.761 - - - - - 0.916 0.845 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
69. PRIMA1 PRIMA1 459 1.753 0.959 - - - - - 0.794 - -
70. lhx4 ENSDARG00000039458 328 1.753 - - - - - 0.824 0.929 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
71. nes ENSDARG00000088805 2710 1.747 - - - - - 0.800 0.947 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
72. tac1 ENSDARG00000014490 781 1.745 0.793 - - - - 0.952 - - - tachykinin 1 [Source:ZFIN;Acc:ZDB-GENE-060503-904]
73. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.744 - - - - - 0.817 0.927 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
74. pdzrn4 ENSDARG00000045687 362 1.743 0.790 - - - - - 0.953 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
75. hnrnpub ENSDARG00000004735 16496 1.735 - 0.906 - - - - 0.829 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
76. C8H1orf106 C8H1orf106 2690 1.733 - - - - - 0.754 0.979 - -
77. her13 ENSDARG00000007097 2000 1.722 0.804 - - - - - 0.918 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
78. prtgb ENSDARG00000040442 12365 1.719 - - - - - 0.976 - - 0.743 protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
79. elavl3 ENSDARG00000014420 8644 1.713 - - - - - 0.793 0.920 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
80. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.71 - - - - - 0.737 0.973 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
81. ptprna ENSDARG00000058646 1327 1.71 - - - - - 0.751 0.959 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
82. ENTHD1 ENTHD1 235 1.707 - - - - - 0.862 0.845 - -
83. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.704 - - - - - 0.803 0.901 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
84. neurog1 ENSDARG00000056130 3924 1.701 - - - - - 0.781 0.920 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
85. irx1b ENSDARG00000056594 2224 1.701 - - - - - 0.771 0.930 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
86. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.7 - - - - - 0.819 0.881 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
87. ek1 ENSDARG00000020080 742 1.698 0.785 - - - - - 0.913 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
88. AGO1 ENSDARG00000092644 4521 1.696 - - - - - 0.776 0.920 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
89. clu ENSDARG00000010434 498 1.691 0.810 - - - - - 0.881 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
90. dlg4 88 1.689 - - - - - 0.735 0.954 - - discs large MAGUK scaffold protein 4, transcript variant X5
91. lhfpl4a ENSDARG00000111810 206 1.687 - - - - - 0.949 0.738 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
92. chga ENSDARG00000008829 1086 1.685 - - - - - 0.868 0.817 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
93. isl1 ENSDARG00000004023 981 1.684 - - - - - 0.750 0.934 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
94. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.683 - - - - - 0.728 0.955 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
95. spon1a ENSDARG00000010029 355 1.682 - - - - - 0.807 0.875 - - spondin 1a [Source:ZFIN;Acc:ZDB-GENE-000427-9]
96. epha3l epha3l 1441 1.677 0.762 - - - - - 0.915 - -
97. tmem240 tmem240 180 1.677 - - - - - 0.823 0.854 - -
98. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.675 - - - - - 0.812 0.863 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
99. RNF208 ENSDARG00000078056 60 1.673 0.778 - - - - - 0.895 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
100. sv2c ENSDARG00000059997 592 1.671 - - - - - 0.787 0.884 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]

There are 1234 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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