Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-21k16.6

Gene Name Gene ID Reads Annotation
si:ch73-21k16.6 si:ch73-21k16.6 4896










Genes with expression patterns similar to si:ch73-21k16.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-21k16.6 si:ch73-21k16.6 4896 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. apex1 ENSDARG00000045843 6345 2.375 0.788 0.758 - - - - 0.829 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
3. creb1a ENSDARG00000053586 5068 2.316 0.728 0.873 - - - 0.715 - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
4. hn1b hn1b 7325 2.301 0.746 0.767 - - - - 0.788 - -
5. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.3 0.790 0.763 - - - - 0.747 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
6. hoxd9a ENSDARG00000059274 3414 2.283 - 0.804 - - - 0.761 - - 0.718 homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
7. ipo7 ENSDARG00000035751 7095 2.283 - 0.783 - - - 0.719 0.781 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
8. ddx39ab ENSDARG00000015111 11619 2.268 0.744 - - - - 0.731 0.793 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
9. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.253 0.812 0.714 - - - - 0.727 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
10. mdh2 ENSDARG00000043371 14485 2.241 0.725 - - - - - 0.713 - 0.803 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
11. anp32e ENSDARG00000054804 11017 2.239 0.754 0.727 - - - - 0.758 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
12. ank2b ENSDARG00000043313 3065 2.216 0.733 - - - - 0.751 0.732 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
13. tmsb ENSDARG00000054911 6411 2.213 0.765 0.727 - - - - 0.721 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
14. chd7 ENSDARG00000075211 12085 2.207 0.796 - - - - 0.703 0.708 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
15. lbx2 ENSDARG00000025131 1388 2.198 0.719 0.711 - - - - 0.768 - - ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
16. limch1a ENSDARG00000074275 2981 2.186 - 0.727 0.754 - - - - - 0.705 LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
17. ubr5 ENSDARG00000018192 9267 2.177 0.706 0.711 - - - - 0.760 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
18. klhl21 ENSDARG00000039255 2550 2.166 - 0.704 - - - - 0.710 - 0.752 kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
19. prmt1 ENSDARG00000010246 11311 1.738 0.873 0.865 - - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
20. wu:fb17g07 wu:fb17g07 10567 1.688 0.854 - - - - - 0.834 - -
21. CABZ01072954.1 CABZ01072954.1 2330 1.681 0.840 - - - - - 0.841 - -
22. ACVR2B 6615 1.676 0.861 0.815 - - - - - - - activin A receptor, type IIB
23. puf60a ENSDARG00000032175 5618 1.675 - 0.829 - - - - 0.846 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
24. dcaf7 ENSDARG00000054355 3517 1.652 - - - - - 0.867 0.785 - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
25. dip2a ENSDARG00000078058 1625 1.638 0.859 - - - - - 0.779 - - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
26. purbb ENSDARG00000103546 4983 1.63 - - 0.853 - - 0.777 - - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
27. cd99l2 ENSDARG00000056722 5036 1.629 0.800 - - - - - 0.829 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
28. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.626 0.839 0.787 - - - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
29. hnrnpub ENSDARG00000004735 16496 1.621 0.817 - - - - - 0.804 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
30. hoxb9a ENSDARG00000056023 11856 1.618 0.810 - - - - - 0.808 - - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
31. pfn2l ENSDARG00000012682 21690 1.614 0.809 - - - - - 0.805 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
32. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 1.611 - 0.819 - - - - 0.792 - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
33. si:ch211-238e22.1 si:ch211-238e22.1 1032 1.607 - - - - - 0.772 0.835 - -
34. BCKDHB ENSDARG00000014676 3725 1.607 - 0.849 - - - - 0.758 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
35. tnnc1b ENSDARG00000037539 13945 1.606 - - 0.784 - - - - - 0.822 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
36. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.601 - 0.828 - - - - 0.773 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
37. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.598 - 0.816 - - - - 0.782 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
38. hmgb3a ENSDARG00000056725 15668 1.597 0.834 - - - - - 0.763 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
39. slc1a3a ENSDARG00000104431 9888 1.595 0.779 - - - - - - - 0.816 solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
40. CABZ01070258.1 ENSDARG00000105687 3643 1.595 0.846 0.749 - - - - - - -
41. cdkn2aipnl ENSDARG00000053395 5107 1.589 - 0.799 - - - 0.790 - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
42. lypla2 ENSDARG00000053656 8971 1.589 - 0.760 - - - - 0.829 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
43. pak2b ENSDARG00000018476 4331 1.582 - 0.781 - - - - 0.801 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
44. tnni2b.1 ENSDARG00000035958 51597 1.581 - - 0.787 - - - - - 0.794 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
45. CABZ01111990.1 CABZ01111990.1 4374 1.58 0.755 0.825 - - - - - - -
46. hoxb10a ENSDARG00000011579 2135 1.577 0.810 - - - - - 0.767 - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
47. nudt3a ENSDARG00000016256 2713 1.575 - 0.846 - - - - 0.729 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
48. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.574 - - 0.760 - - - - - 0.814 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
49. eif2s3 ENSDARG00000008292 17051 1.572 0.709 0.863 - - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
50. apobec2a ENSDARG00000018881 4790 1.572 - - 0.781 - - - - - 0.791 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
51. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.572 - 0.846 - - - - 0.726 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
52. plagx ENSDARG00000036855 3768 1.565 0.709 - - - - - 0.856 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
53. zmiz1a ENSDARG00000074502 3920 1.561 - 0.817 - - - - 0.744 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
54. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.56 0.791 - - - - - 0.769 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
55. AGO1 ENSDARG00000092644 4521 1.56 0.832 0.728 - - - - - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
56. hoxa9b ENSDARG00000056819 3081 1.559 0.840 - - - - - - - 0.719 homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
57. ptbp2b ENSDARG00000015901 2458 1.558 0.826 - - - - - 0.732 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
58. yth2 yth2 3716 1.557 - 0.824 - - - - 0.733 - -
59. prnprs3 ENSDARG00000003705 1854 1.556 0.785 - - - - - 0.771 - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
60. kdm1a ENSDARG00000060679 6152 1.556 0.747 - - - - - 0.809 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
61. supt6h ENSDARG00000006524 3221 1.552 - 0.809 - - - - 0.743 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
62. si:ch211-207e19.11 si:ch211-207e19.11 9604 1.549 - - 0.790 - - - - - 0.759
63. paip2b ENSDARG00000008706 4255 1.548 - 0.836 - - - 0.712 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
64. dnmt3ab ENSDARG00000015566 1206 1.547 0.829 0.718 - - - - - - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
65. wasf3 wasf3 3287 1.546 0.807 - - - - - 0.739 - -
66. BX950186.2 BX950186.2 1267 1.546 - - - - - 0.738 0.808 - -
67. mrps23 ENSDARG00000033973 2265 1.544 - 0.829 - - - - 0.715 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
68. POLE4 ENSDARG00000013016 848 1.543 - 0.734 - - - - 0.809 - - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
69. txn2 ENSDARG00000034777 4071 1.543 - 0.785 - - - - 0.758 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
70. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.542 - 0.831 - - - - 0.711 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
71. dnajc15 ENSDARG00000038309 1274 1.54 0.826 - - - - - 0.714 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
72. setb ENSDARG00000003920 21788 1.537 - - - - - 0.777 0.760 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
73. api5 ENSDARG00000033597 6655 1.536 0.725 - - - - 0.811 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
74. SPEG SPEG 4017 1.535 - - 0.768 - 0.767 - - - -
75. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.534 - 0.785 - - - - 0.749 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
76. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.533 - 0.741 - - - - 0.792 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
77. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.532 - 0.788 - - - - 0.744 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
78. snrpc ENSDARG00000009871 9567 1.532 0.754 - - - - - 0.778 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
79. myf6 ENSDARG00000029830 1911 1.528 0.795 - - - - - - - 0.733 myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
80. top2b ENSDARG00000034195 3715 1.528 - 0.786 - - - - 0.742 - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
81. nr2f2 ENSDARG00000040926 5213 1.526 0.731 - - - - 0.795 - - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
82. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.524 - - 0.768 - 0.756 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
83. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.523 - 0.772 - - - 0.751 - - -
84. dut ENSDARG00000106529 3120 1.52 0.745 - - - - - 0.775 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
85. pbx4 ENSDARG00000052150 35676 1.518 0.786 0.732 - - - - - - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
86. Sep-06 Sep-06 5465 1.518 - 0.776 - - - - 0.742 - -
87. hnrnpr ENSDARG00000014569 3423 1.518 - 0.702 - - - - 0.816 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
88. ATP5J_2 ATP5J_2 2381 1.517 - 0.765 - - - - - - 0.752
89. ccdc85ca ENSDARG00000005232 3218 1.516 0.761 - - - - - 0.755 - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
90. mrpl40 ENSDARG00000043554 2198 1.516 - 0.720 - - - - 0.796 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
91. foxp4 ENSDARG00000076120 9458 1.515 0.789 0.726 - - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
92. mier1a ENSDARG00000041072 1690 1.515 - 0.709 - - - - 0.806 - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
93. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.513 - - - - - - 0.746 - 0.767 heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
94. ssbp4 ENSDARG00000056483 10196 1.512 0.739 - - - - - 0.773 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
95. isoc2 ENSDARG00000013371 1378 1.512 - 0.782 - - - 0.730 - - - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
96. igdcc4 ENSDARG00000076919 1303 1.511 0.759 0.752 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
97. dbn1 ENSDARG00000069113 4527 1.51 0.795 - - - - - 0.715 - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
98. txlnba ENSDARG00000020594 9385 1.509 - - 0.729 - - - - - 0.780 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
99. TACC2 1702 1.508 - 0.797 - - - - 0.711 - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
100. FP016176.1 FP016176.1 7030 1.508 0.775 0.733 - - - - - - -

There are 1504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA