Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-21g5.7

Gene Name Gene ID Reads Annotation
si:ch73-21g5.7 ENSDARG00000093156 9412 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]










Genes with expression patterns similar to si:ch73-21g5.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-21g5.7 ENSDARG00000093156 9412 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
2. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 5.652 0.785 0.749 0.807 0.701 - 0.970 0.919 - 0.721 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
3. her4.1 ENSDARG00000056732 1264 5.565 0.745 0.745 0.787 - - 0.835 0.928 0.817 0.708 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
4. dpysl5a ENSDARG00000011141 1827 5.133 0.861 0.796 0.869 - - 0.890 0.973 - 0.744 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
5. plp1a ENSDARG00000103732 3544 5.114 0.893 - - 0.805 - 0.973 0.985 0.705 0.753 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
6. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 4.799 0.792 0.749 0.845 0.870 - 0.752 - - 0.791 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
7. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 4.768 0.713 - 0.769 - - 0.922 0.902 0.713 0.749 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
8. cspg5a ENSDARG00000069981 1699 4.623 0.733 0.700 0.796 0.728 - - 0.965 - 0.701 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
9. myt1b ENSDARG00000102879 5411 4.522 0.915 0.933 - - - 0.919 0.970 - 0.785 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
10. nova2 ENSDARG00000017673 7685 4.362 0.945 0.890 - - - 0.791 0.990 - 0.746 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
11. mapk12b ENSDARG00000006409 2246 4.357 0.748 0.911 - 0.721 - 0.983 0.994 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
12. nrarpb ENSDARG00000018958 6225 4.348 0.886 0.798 - - - 0.904 0.988 - 0.772 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
13. tuba1c ENSDARG00000055216 8384 4.335 0.930 - - - - 0.882 0.980 0.739 0.804 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. cnrip1a ENSDARG00000091683 1491 4.293 0.845 0.734 - - - 0.948 0.995 0.771 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
15. zic1 ENSDARG00000015567 2520 4.221 0.708 0.781 0.901 - - 0.936 0.895 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
16. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 4.22 0.921 - 0.710 - - - 0.988 0.835 0.766 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
17. ZFHX3 ENSDARG00000103057 7759 4.192 0.791 - 0.820 0.753 - 0.879 0.949 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
18. gap43 ENSDARG00000099744 4114 4.144 0.741 0.804 - - - 0.909 0.972 - 0.718 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
19. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 4.128 - 0.846 - 0.758 - 0.794 0.975 - 0.755 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
20. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 4.111 0.921 - 0.788 - - 0.702 0.962 - 0.738 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
21. rtn1b ENSDARG00000021143 1682 4.11 0.792 0.813 - - - 0.899 0.893 0.713 - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
22. her13 ENSDARG00000007097 2000 4.078 0.866 - 0.777 - - - 0.923 0.780 0.732 hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
23. rap2ip rap2ip 681 4.037 - 0.751 - - - 0.870 0.960 0.715 0.741
24. hnrnpub ENSDARG00000004735 16496 3.924 0.759 - - 0.757 - 0.844 0.850 - 0.714 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
25. pcsk1nl ENSDARG00000076170 1232 3.758 0.906 0.922 - - - 0.958 0.972 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
26. sox2 ENSDARG00000070913 2763 3.742 0.908 0.926 - - - 0.940 0.968 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
27. syt11a ENSDARG00000057913 1145 3.712 0.888 0.876 - - - 0.977 0.971 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
28. marcksa ENSDARG00000004049 2518 3.711 - 0.711 - 0.706 - - 0.842 0.731 0.721 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
29. st18 663 3.676 - 0.906 - - - 0.977 0.954 0.839 - suppression of tumorigenicity 18, zinc finger
30. mir10d-1 mir10d-1 860 3.661 0.900 0.871 - - - 0.952 0.938 - -
31. pcdh1gc5 ENSDARG00000104826 10052 3.66 0.907 0.835 - - - 0.936 0.982 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
32. tox ENSDARG00000032317 9126 3.645 0.869 - - - 0.998 0.815 0.963 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
33. slc18a3a ENSDARG00000006356 1285 3.617 0.950 0.851 - - - 0.821 0.995 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
34. BX957337.1 BX957337.1 1685 3.609 0.909 0.768 - - - 0.973 0.959 - -
35. nadl1.1 1200 3.604 0.922 0.899 - - - 0.812 0.971 - - neural adhesion molecule L1.1, transcript variant X1
36. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 3.599 0.703 - - - 0.999 0.970 0.927 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
37. stx1b ENSDARG00000000503 2724 3.597 0.907 0.890 - - - 0.828 0.972 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
38. nes ENSDARG00000088805 2710 3.594 0.922 0.913 - - - 0.780 0.979 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
39. CU928222.1 ENSDARG00000097436 1662 3.572 0.898 0.903 - - - 0.800 0.971 - -
40. CLIP3 ENSDARG00000054456 734 3.57 0.886 0.808 - - - 0.941 0.935 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
41. dla ENSDARG00000010791 9281 3.568 0.981 0.803 - - - - 0.996 - 0.788 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
42. atp1b4 ENSDARG00000053262 1337 3.561 0.861 0.817 - - - 0.968 0.915 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
43. mllt11 ENSDARG00000071026 2518 3.558 0.868 - - - - 0.885 0.949 0.856 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
44. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.556 0.882 0.904 - - - - 0.990 - 0.780 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
45. stmn2a ENSDARG00000033234 2272 3.544 0.738 0.900 - - - 0.949 0.957 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
46. her15.2 her15.2 1701 3.536 - 0.881 0.729 - - 0.973 0.953 - -
47. sox21b ENSDARG00000008540 1460 3.519 0.900 0.896 - - - - 0.995 0.728 - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
48. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.499 0.944 0.737 - - - 0.836 0.982 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
49. snap25a ENSDARG00000020609 4537 3.496 0.824 0.871 - - - 0.856 0.945 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
50. stxbp1a ENSDARG00000001994 5154 3.48 - 0.884 - - - 0.917 0.963 - 0.716 syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
51. fzd3a ENSDARG00000021664 1958 3.474 0.951 - 0.842 0.769 - - 0.912 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
52. slc32a1 ENSDARG00000059775 1092 3.469 0.760 0.898 - - - 0.862 0.949 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
53. C7H4orf48 C7H4orf48 1455 3.467 0.832 - - - - 0.937 0.923 0.775 -
54. SNAP91 ENSDARG00000098809 556 3.467 0.796 0.906 - - - 0.798 0.967 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
55. MAP6 MAP6 643 3.464 0.736 0.835 - - - 0.931 0.962 - -
56. stmn1b ENSDARG00000033655 9491 3.461 0.813 - - - - 0.954 0.990 - 0.704 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
57. scrt2 ENSDARG00000056175 4331 3.458 0.803 0.835 - - - 0.900 0.920 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
58. mdkb ENSDARG00000020708 5393 3.455 - - 0.900 0.782 - 0.943 0.830 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
59. amph ENSDARG00000007663 599 3.449 0.780 0.875 - - - 0.840 0.954 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
60. vsnl1a ENSDARG00000023228 1584 3.447 0.738 0.918 - - - 0.923 0.868 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
61. MAP1A MAP1A 847 3.445 0.753 0.874 - - - 0.897 0.921 - -
62. gnao1a ENSDARG00000016676 8184 3.44 0.861 0.768 - - - - 0.985 - 0.826 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
63. ptprna ENSDARG00000058646 1327 3.438 - 0.753 0.898 - - 0.814 0.973 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
64. scn8aa ENSDARG00000005775 792 3.436 0.773 0.898 - - - 0.822 0.943 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
65. hmgb1b ENSDARG00000030479 10398 3.436 0.827 - 0.835 - - 0.838 0.936 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
66. CHL1 CHL1 1553 3.428 0.895 0.907 - - - 0.700 0.926 - -
67. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.426 0.756 0.862 - - - 0.933 0.875 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
68. AGO1 ENSDARG00000092644 4521 3.426 0.879 0.709 0.863 - - - 0.975 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
69. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.41 0.736 0.777 - - - 0.934 0.963 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
70. ttc9b ENSDARG00000068421 251 3.406 0.812 0.914 - - - 0.951 - 0.729 - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
71. TUBB8P7_1 TUBB8P7_1 2722 3.403 0.838 0.778 - - - 0.834 0.953 - -
72. stmn2b ENSDARG00000070537 1586 3.397 0.853 0.806 - - - 0.871 0.867 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
73. atp6v0cb ENSDARG00000036577 3472 3.391 0.806 - - - - 0.874 0.989 - 0.722 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
74. st8sia2 ENSDARG00000018788 2183 3.387 0.748 - 0.743 - - 0.951 0.945 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
75. slc1a3a ENSDARG00000104431 9888 3.38 0.792 0.734 - - - 0.907 0.947 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
76. Sep-03 Sep-03 1124 3.369 0.799 - 0.856 - - 0.829 0.885 - -
77. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.367 0.804 0.892 - 0.711 - - 0.960 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
78. sox3 ENSDARG00000053569 12016 3.363 0.949 0.828 0.844 - - - 0.742 - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
79. pax6a ENSDARG00000103379 3061 3.357 0.863 0.794 - - - 0.758 0.942 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
80. slc1a2b ENSDARG00000102453 3136 3.356 0.774 0.814 - - - 0.815 0.953 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
81. msi1 ENSDARG00000010710 2634 3.356 0.786 - 0.791 - - 0.808 0.971 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
82. ptprnb ENSDARG00000077047 2743 3.351 0.860 0.923 0.746 - - - 0.822 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
83. CABZ01111990.1 CABZ01111990.1 4374 3.349 0.865 - - - - - 0.977 0.757 0.750
84. mex3b ENSDARG00000058369 1867 3.348 - - 0.771 - - 0.887 0.936 0.754 - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
85. cadm3 ENSDARG00000057013 1545 3.339 - 0.829 - - - 0.899 0.897 - 0.714 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
86. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 3.339 0.783 0.892 - - - - 0.958 - 0.706 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
87. fez1 ENSDARG00000023174 701 3.338 0.770 - - - - 0.891 0.863 0.814 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
88. kcnc3a ENSDARG00000055855 1821 3.311 0.850 0.701 - - - 0.800 0.960 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
89. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.308 - 0.723 - - - 0.927 0.932 0.726 -
90. C8H1orf106 C8H1orf106 2690 3.308 0.860 - 0.701 0.805 - - 0.942 - -
91. npas3b npas3b 1446 3.298 0.762 - 0.757 - - 0.795 0.984 - -
92. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 3.284 0.788 0.743 - - - 0.942 0.811 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
93. hmgb3a ENSDARG00000056725 15668 3.28 0.811 - - - - 0.842 0.864 - 0.763 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
94. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 3.255 - - 0.830 - - 0.866 0.856 0.703 - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
95. gad2 ENSDARG00000015537 724 3.253 0.801 0.815 - - - 0.806 0.831 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
96. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.248 0.726 0.729 - - - 0.853 0.940 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
97. dpysl3 ENSDARG00000002587 4381 3.243 0.758 - - - - 0.743 0.967 - 0.775 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
98. nbeaa ENSDARG00000070080 862 3.212 0.819 - - - - 0.718 0.968 - 0.707 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
99. ptbp2b ENSDARG00000015901 2458 3.209 0.734 - - - - 0.931 0.841 0.703 - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
100. ELOVL4 ELOVL4 3026 3.194 0.891 0.705 - - - - 0.885 - 0.713

There are 2688 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA