Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-191k20.4

Gene Name Gene ID Reads Annotation
si:ch73-191k20.4 37 si:ch73-191k20.4, transcript variant X1










Genes with expression patterns similar to si:ch73-191k20.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-191k20.4 37 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-191k20.4, transcript variant X1
2. HIST2H4A HIST2H4A 33 2.449 - - - - - - 0.939 0.714 0.796
3. hel_dr4 hel_dr4 12 1.892 0.892 - - - - 1.000 - - -
4. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1.867 - - - 0.867 - 1.000 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
5. DEPDC7 19 1.816 - - - - - 1.000 - - 0.816 DEP domain containing 7, transcript variant X1
6. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1.799 - - - - - 1.000 - 0.799 - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
7. KCNJ12 KCNJ12 17 1.791 - - - - 0.791 1.000 - - -
8. si:ch211-218c6.9 si:ch211-218c6.9 40 1.786 - - - - 0.786 1.000 - - -
9. adam19b ENSDARG00000067545 162 1.708 - - - - - 0.793 0.915 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
10. prkaa2 ENSDARG00000060641 12 1.634 - - 0.866 - - 0.768 - - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
11. CCDC88A CCDC88A 90 1.612 0.728 - - - - 0.884 - - -
12. SGSM1_1 SGSM1_1 40 1.607 - - 0.748 - - 0.859 - - -
13. ADAMTS16 ENSDARG00000074646 277 1.525 - - - - 0.714 - 0.811 - - ADAM metallopeptidase with thrombospondin type 1 motif, 16 [Source:ZFIN;Acc:ZDB-GENE-130530-760]
14. C9HXorf36 C9HXorf36 44 1.482 - - 0.700 - - 0.782 - - -
15. SYTL1 ENSDARG00000070094 282 1.454 - - - - 0.738 - 0.716 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
16. SYN3 0 1 - - - - - 1.000 - - - synapsin III
17. si:dkey-247i3.1 ENSDARG00000076252 11 1 - - - - - 1.000 - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
18. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - 1.000 - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
19. si:ch211-226h7.4 si:ch211-226h7.4 0 1 - - - - - 1.000 - - -
20. si:ch211-22k7.8 si:ch211-22k7.8 0 1 - - - - - 1.000 - - -
21. hbaa2 ENSDARG00000069735 10 1 - - - - - 1.000 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
22. si:dkey-161j23.6 ENSDARG00000092347 0 1 - - - - - 1.000 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]
23. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 1 - - - - - 1.000 - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
24. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - - - 1.000 - - -
25. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - 1.000 - - -
26. zgc:136902 zgc:136902 4 1 - - - - - 1.000 - - -
27. cbx7b ENSDARG00000087181 5 1 - - - - - 1.000 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
28. BX569793.1 ENSDARG00000096832 0 1 - - - - - 1.000 - - -
29. sdhaf1 ENSDARG00000092478 51 1 - - - - - 1.000 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
30. si:ch211-113a14.15_1 2 1 - - - - - 1.000 - - - si:ch211-113a14.15
31. tlr1 ENSDARG00000100649 2 1 - - - - - 1.000 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
32. AL928685.1 ENSDARG00000095786 0 1 - - - - - 1.000 - - -
33. PPFIBP1 PPFIBP1 46 1 - - - - - 1.000 - - -
34. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - - - - 1.000 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
35. BX005421.3 ENSDARG00000114309 7 1 - - - - - 1.000 - - -
36. col5a2b ENSDARG00000024847 17 1 - - - - - 1.000 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
37. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - 1.000 - - -
38. PEG3_34 PEG3_34 0 1 - - - - - 1.000 - - -
39. si:ch1073-403i13.1 si:ch1073-403i13.1 1 1 - - - - - 1.000 - - -
40. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - - - 1.000 - - -
41. CR847844.3 CR847844.3 1 1 - - - - - 1.000 - - -
42. HTR7 17 1 - - - - - 1.000 - - - 5-hydroxytryptamine receptor 7
43. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - - 1.000 - - -
44. si:dkey-20j1.5 si:dkey-20j1.5 1 1 - - - - - 1.000 - - -
45. EGFR_1 EGFR_1 2 1 - - - - - 1.000 - - -
46. CABZ01113978.1 CABZ01113978.1 1 1 - - - - - 1.000 - - -
47. ENSDARG00000091642 ENSDARG00000091642 14 1 - - - - - 1.000 - - -
48. ungb ENSDARG00000094922 16 1 - - - - - 1.000 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
49. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - 1.000 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
50. gcnt4b ENSDARG00000077550 2 1 - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
51. AHNAK2 AHNAK2 33 1 - - - - - 1.000 - - -
52. lmbrd2a ENSDARG00000099566 15 1 - - - - - 1.000 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
53. coch ENSDARG00000024032 7 1 - - - - - 1.000 - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
54. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - 1.000 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
55. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - 1.000 - - -
56. heatr1 ENSDARG00000099742 92 1 - - - - - 1.000 - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
57. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - - - - - 1.000 - - -
58. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - 1.000 - - -
59. vcpip1 ENSDARG00000060177 56 1 - - - - - 1.000 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
60. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
61. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
62. esyt1b ENSDARG00000014239 8 1 - - - - - 1.000 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
63. tpgs2 ENSDARG00000011926 48 1 - - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
64. slc4a4b ENSDARG00000044808 9 1 - - - - - 1.000 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
65. kcnq2a ENSDARG00000075307 7 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
66. si:ch211-171b20.3 ENSDARG00000094794 2 1 - - - - - 1.000 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
67. adarb1b ENSDARG00000003544 31 1 - - - - - 1.000 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
68. si:dkey-32n7.8 ENSDARG00000090630 0 1 - - - - - 1.000 - - - si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326]
69. dnmt3aa ENSDARG00000005394 63 1 - - - - - 1.000 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
70. ENSDARG00000086666 ENSDARG00000086666 2159 1 - - - - - 1.000 - - -
71. BX294653.4 BX294653.4 1 1 - - - - - 1.000 - - -
72. aven ENSDARG00000002894 49 1 - - - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
73. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - 1.000 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
74. atp8b5a ENSDARG00000062040 1 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
75. zgc:162879 ENSDARG00000074163 6 1 - - - - - 1.000 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
76. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 1 - - - - - 1.000 - - -
77. U1_54 U1_54 0 1 - - - - - 1.000 - - -
78. zgc:195633_1 142 1 - - - - - 1.000 - - - zgc:195633
79. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - - 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
80. or125-4 ENSDARG00000095417 2 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
81. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
82. ei24 ENSDARG00000053840 78 1 - - - - - 1.000 - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
83. apex2 ENSDARG00000008472 39 1 - - - - - 1.000 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
84. wu:fa26c03 18714 1 - - - - - 1.000 - - - wu:fa26c03
85. SNTB2 ENSDARG00000051763 2 1 - - - - - 1.000 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
86. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
87. elavl2 ENSDARG00000040732 44 1 - - - - - 1.000 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
88. veph veph 3 1 - - - - - 1.000 - - -
89. zeb1a ENSDARG00000016788 48 1 - - - - - 1.000 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
90. CR854899.1 ENSDARG00000102357 8 1 - - - - - 1.000 - - -
91. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - 1.000 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
92. pak1_1 ENSDARG00000103959 28 1 - - - - - 1.000 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
93. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - 1.000 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
94. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - - - - 1.000 - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
95. tti2 ENSDARG00000073773 19 1 - - - - - 1.000 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
96. mtmr10 ENSDARG00000010601 37 1 - - - - - 1.000 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
97. C12H17orf70 C12H17orf70 25 1 - - - - - 1.000 - - -
98. si:ch211-145h19.1 31 1 - - - - - 1.000 - - - si:ch211-145h19.1
99. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - 1.000 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
100. TRIM14_11 TRIM14_11 2 1 - - - - - 1.000 - - -

There are 698 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA