Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-167f18.3

Gene Name Gene ID Reads Annotation
si:ch73-167f18.3 si:ch73-167f18.3 78










Genes with expression patterns similar to si:ch73-167f18.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-167f18.3 si:ch73-167f18.3 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ALPK1 195 2.603 - 0.861 - - - - 0.764 0.978 - alpha-kinase 1
3. dclk1a ENSDARG00000018856 177 1.864 0.891 - - - - - - 0.973 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
4. ponzr1 ENSDARG00000090444 540 1.751 0.823 - - - - - - 0.928 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
5. spef2 ENSDARG00000098330 59 1.732 - - - - 0.734 - - 0.998 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
6. ptpdc1 ptpdc1 281 1.675 0.725 - - - - - - 0.950 -
7. clybl ENSDARG00000029729 690 1.67 - - - - - - 0.734 0.936 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
8. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1.66 - - - - 0.909 0.751 - - -
9. si:rp71-17i16.6 ENSDARG00000095453 167 1.656 0.950 - - - - - 0.706 - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
10. h1m ENSDARG00000102892 319 1.651 - 0.868 - - - - 0.783 - - linker histone H1M [Source:ZFIN;Acc:ZDB-GENE-030131-5614]
11. CU694254.1 CU694254.1 4 1.651 - - - - - 0.751 - - 0.900
12. grapa ENSDARG00000005414 29 1.641 - 0.797 - - 0.844 - - - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
13. lrrc39 ENSDARG00000071465, ENSDARG00000116738 349 1.632 - 0.726 - - - - - 0.906 - leucine rich repeat containing 39 [Source:ZFIN;Acc:ZDB-GENE-050417-279]
14. PLXNB2_1 PLXNB2_1 10 1.617 - - - - 0.903 - 0.714 - -
15. CABZ01031998.1 CABZ01031998.1 3 1.606 - - - - - - 0.714 - 0.892
16. tmem9 ENSDARG00000055757 340 1.599 - 0.726 - - - - - 0.873 - transmembrane protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-6083]
17. zgc:173770 ENSDARG00000076476 34 1.595 0.891 - - - - - 0.704 - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
18. cyb5r2 ENSDARG00000051925 304 1.58 - 0.866 - - - - 0.714 - - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
19. nrbf2 nrbf2 604 1.577 - 0.723 - - - - - 0.854 -
20. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.574 - 0.823 - - - 0.751 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
21. fhl3b ENSDARG00000104315 359 1.572 0.866 0.706 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
22. ccdc78 ENSDARG00000030095 8 1.552 - - - - - 0.751 0.801 - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
23. SLC41A2 SLC41A2 202 1.551 - - - - - - 0.720 0.831 -
24. si:ch211-196n4.5 si:ch211-196n4.5 63 1.549 - 0.798 - - - 0.751 - - -
25. ACBD3 ENSDARG00000042623 159 1.549 - 0.842 - - - 0.707 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
26. HIST2H4A HIST2H4A 33 1.548 - - - - - 0.751 - - 0.797
27. ipp ENSDARG00000075339 3 1.547 - - - - - 0.751 - - 0.796 intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
28. il11b ENSDARG00000058557 17 1.537 - 0.823 - - - - 0.714 - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
29. cyp2k8 ENSDARG00000101190 69 1.518 - 0.804 - - - - 0.714 - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
30. znf687b ENSDARG00000019299 71 1.516 - 0.777 0.739 - - - - - - zinc finger protein 687b [Source:ZFIN;Acc:ZDB-GENE-041111-214]
31. AL954146.5 AL954146.5 202 1.505 0.748 0.757 - - - - - - -
32. srd5a3 ENSDARG00000043307 142 1.496 - - - - - 0.751 0.745 - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
33. csrnp1a ENSDARG00000031426 225 1.49 0.756 0.734 - - - - - - - cysteine-serine-rich nuclear protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-475]
34. bbc3 ENSDARG00000069282 79 1.475 - 0.747 - - - 0.728 - - - BCL2 binding component 3 [Source:ZFIN;Acc:ZDB-GENE-070119-4]
35. abhd6a ENSDARG00000060756 122 1.472 0.770 0.702 - - - - - - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
36. gpib ENSDARG00000103826 19 1.425 0.702 - - - - - 0.723 - - glucose-6-phosphate isomerase b [Source:ZFIN;Acc:ZDB-GENE-020513-3]
37. pcsk7 ENSDARG00000069968 5 1.416 0.702 - - - - - 0.714 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
38. sult1st3 ENSDARG00000018361 7 1.415 - - 0.701 - - - 0.714 - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
39. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1 - - - - - 1.000 - - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
40. pde6b ENSDARG00000011671 44 1 - - - - - - - 1.000 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
41. slc6a6b ENSDARG00000098438 7 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
42. mir92a-1 20 1 - - - - - 1.000 - - - microRNA 92a-1
43. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - - - - 1.000 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
44. jam3a ENSDARG00000114589 630 1 - - - - - - - 1.000 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
45. TRHDE_1 TRHDE_1 102 1 - - - - - 1.000 - - -
46. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 - - - - - 1.000 - - -
47. si:dkey-100h21.2 si:dkey-100h21.2 30 1 - - - - - - - 1.000 -
48. IKZF4 ENSDARG00000037068 36 1 - - - - - - - 1.000 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
49. adcyap1a ENSDARG00000004015 67 1 - - - - - - - 1.000 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
50. mir130b 180 0.999 - - - - - - - 0.999 - microRNA 130b
51. VDAC3 ENSDARG00000003695 34 0.998 - - - - - - - 0.998 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
52. GDPD4_1 GDPD4_1 190 0.998 - - - - - - - 0.998 -
53. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.998 - - - - - - - 0.998 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
54. hoxa4a 37 0.998 - - - - - - - 0.998 - homeobox A4a, transcript variant X4
55. ankdd1b ENSDARG00000025866 51 0.997 - - - - - - - 0.997 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
56. MAP7 MAP7 98 0.997 - - - - - - - 0.997 -
57. pus7 ENSDARG00000031774 195 0.997 - - - - - - - 0.997 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
58. si:dkey-157e10.7 si:dkey-157e10.7 105 0.996 - - - - - - - 0.996 -
59. rpgra ENSDARG00000056617 77 0.995 - - - - - - - 0.995 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
60. prkag3b ENSDARG00000000369 1945 0.994 - - - - - - - 0.994 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
61. ly75 ENSDARG00000053113 196 0.994 - - - - - - - 0.994 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
62. TTF1_4 TTF1_4 504 0.994 - - - - - - - 0.994 -
63. si:dkey-17e6.2 si:dkey-17e6.2 72 0.993 - - - - - - - 0.993 -
64. KBTBD13_1 KBTBD13_1 116 0.993 - - - - - - - 0.993 -
65. BX005410.2 BX005410.2 44 0.992 - - - - - - - 0.992 -
66. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.992 - - - - - - - 0.992 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
67. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.991 - - - - - - - 0.991 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
68. CIT CIT 212 0.99 - - - - - - - 0.990 -
69. SHANK1 ENSDARG00000060539 102 0.99 - - - - - - - 0.990 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
70. mea1 ENSDARG00000039820 589 0.99 - - - - - - - 0.990 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
71. tarsl2 ENSDARG00000092774 505 0.99 - - - - - - - 0.990 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
72. rwdd2b ENSDARG00000055426 294 0.989 - - - - - - - 0.989 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
73. pard3 pard3 161 0.989 - - - - - - - 0.989 -
74. hn1a hn1a 115 0.989 - - - - - - - 0.989 -
75. zgc:174688 zgc:174688 170 0.989 - - - - - - - 0.989 -
76. nrxn2b ENSDARG00000063150 343 0.989 - - - - - - - 0.989 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
77. b3galtla b3galtla 111 0.988 - - - - - - - 0.988 -
78. CABZ01045230.1 CABZ01045230.1 158 0.988 - - - - - - - 0.988 -
79. slc6a6a ENSDARG00000012534 183 0.988 - - - - - - - 0.988 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
80. BX511021.1 ENSDARG00000073936 647 0.987 - - - - - - - 0.987 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
81. zgc:174877 ENSDARG00000079278 143 0.986 - - - - - - - 0.986 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
82. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.985 - - - - - - - 0.985 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
83. commd1 ENSDARG00000031203 340 0.985 - - - - - - - 0.985 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
84. aatkb ENSDARG00000104442 392 0.984 - - - - - - - 0.984 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
85. p2rx3b ENSDARG00000029718 105 0.982 - - - - - - - 0.982 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
86. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.982 - - - - - - - 0.982 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
87. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.981 - - - - - - - 0.981 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
88. enosf1 ENSDARG00000038359 209 0.981 - - - - - - - 0.981 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
89. nrp2b ENSDARG00000038446 783 0.981 - - - - - - - 0.981 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
90. si:dkey-253d23.2 ENSDARG00000071589 143 0.98 - - - - - - - 0.980 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
91. smarcd2 ENSDARG00000088877 416 0.98 - - - - - - - 0.980 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
92. RUFY1 ENSDARG00000078685 114 0.98 - - - - - 0.980 - - - RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
93. camk2d1 ENSDARG00000043010 669 0.979 - - - - - - - 0.979 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
94. fgf12a ENSDARG00000027957 143 0.978 - - - - - - - 0.978 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
95. reep1 ENSDARG00000014854 915 0.978 - - - - - - - 0.978 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
96. ncoa6 ENSDARG00000071272 759 0.978 - - - - - - - 0.978 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
97. CR381544.1 ENSDARG00000088187 821 0.976 - - - - - - - 0.976 -
98. si:dkey-8k3.2 ENSDARG00000038424 285 0.975 - - - - - - - 0.975 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
99. zgc:122979 ENSDARG00000004187 61 0.975 - - - - - - - 0.975 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
100. ANGPT4 ENSDARG00000076787 140 0.974 - - - - - - - 0.974 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]

There are 1181 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA