Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-141f17.1

Gene Name Gene ID Reads Annotation
si:ch73-141f17.1 si:ch73-141f17.1 1










Genes with expression patterns similar to si:ch73-141f17.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-141f17.1 si:ch73-141f17.1 1 3 - 1.000 - - 1.000 - - 1.000 -
2. zeb2b ENSDARG00000078416 23 2 - 1.000 - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
3. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.842 - 1.000 - - 0.842 - - - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
4. RIMS1 RIMS1 9 1.83 - 1.000 - - - - - 0.830 -
5. si:dkey-6n3.3 si:dkey-6n3.3 9 1.828 - 1.000 - - - - - 0.828 -
6. slc8a1a ENSDARG00000013422 12 1.817 - - - - 0.981 - - 0.836 - solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
7. BX469915.2 BX469915.2 48 1.766 - 1.000 - - 0.766 - - - -
8. rc3h2 ENSDARG00000063050 7 1.435 - 0.704 - - - - - 0.731 - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
9. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - 1.000 - - - - - - -
10. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
11. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
12. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
13. PLCXD1_3 PLCXD1_3 35 1 - 1.000 - - - - - - -
14. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
15. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
16. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 - 1.000 - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
17. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
18. cpeb1b ENSDARG00000008454 37 1 - 1.000 - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
19. KCNS3 KCNS3 82 1 - 1.000 - - - - - - -
20. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
21. USP43 USP43 14 1 - 1.000 - - - - - - -
22. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
23. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
24. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
25. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
26. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
27. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
28. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
29. rereb ENSDARG00000075670 136 1 - 1.000 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
30. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - - - 1.000 - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
31. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
32. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
33. abcc6a ENSDARG00000016750 10 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
34. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
35. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - 1.000 - - - - - - -
36. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
37. U6_20 U6_20 0 1 - 1.000 - - - - - - -
38. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
39. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
40. U6_32 U6_32 0 1 - 1.000 - - - - - - -
41. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
42. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
43. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
44. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
45. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
46. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
47. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
48. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
49. BIN1 BIN1 11 1 - - - - 1.000 - - - -
50. syt9b ENSDARG00000029239 31 1 - 1.000 - - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
51. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
52. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
53. tecrl2 tecrl2 11 1 - 1.000 - - - - - - -
54. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
55. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
56. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
57. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
58. sst2 ENSDARG00000014190 617 1 - 1.000 - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
59. her3 ENSDARG00000076857 131 1 - 1.000 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
60. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
61. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
62. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
63. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
64. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
65. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
66. tekt1 ENSDARG00000101331 27 1 - 1.000 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
67. camk1db ENSDARG00000017446 47 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
68. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
69. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
70. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
71. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
72. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
73. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
74. cyp2j20 ENSDARG00000094057 44 1 - 1.000 - - - - - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
75. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
76. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
77. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
78. ACTR3_1 ACTR3_1 2 1 - 1.000 - - - - - - -
79. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
80. ccdc14 ENSDARG00000098734 3 1 - 1.000 - - - - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
81. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
82. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
83. cdh10 cdh10 38 1 - 1.000 - - - - - - -
84. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
85. SRCIN1 SRCIN1 5 1 - 1.000 - - - - - - -
86. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
87. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
88. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
89. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
90. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
91. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - 1.000 - - - - - - -
92. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
93. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
94. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
95. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
96. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
97. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
98. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
99. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
100. CST7 CST7 22 1 - - - - 1.000 - - - -

There are 626 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA