Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-138n13.1

Gene Name Gene ID Reads Annotation
si:ch73-138n13.1 ENSDARG00000075349 4411 si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]










Genes with expression patterns similar to si:ch73-138n13.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-138n13.1 ENSDARG00000075349 4411 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
2. si:dkey-177p2.6 ENSDARG00000042322 2783 1.792 - 0.801 0.991 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
3. alas1 ENSDARG00000021059 4892 1.702 - - - - - 0.869 - 0.833 - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
4. tmem56b ENSDARG00000098224 1524 1.694 - 0.775 - - - - - 0.919 - transmembrane protein 56b [Source:ZFIN;Acc:ZDB-GENE-041010-90]
5. pdia3 ENSDARG00000102640 7239 1.692 - - 0.989 - - 0.703 - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
6. ndnl2 ENSDARG00000058212 1042 1.645 - 0.747 - - - - - 0.898 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
7. dcun1d1 ENSDARG00000099642 2043 1.642 - 0.778 - - - - - 0.864 - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
8. U6 U6 931 1.638 - 0.729 - - - - - 0.909 -
9. prrg4 ENSDARG00000030753 1008 1.613 - 0.867 - - - 0.746 - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
10. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.601 - 0.822 - - - 0.779 - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
11. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.564 - 0.736 - - - - - 0.828 - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
12. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.536 - 0.821 - - - 0.715 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
13. arhgef10lb ENSDARG00000074244, ENSDARG00000117194 907 1.533 - 0.715 - - - - - 0.818 - Rho guanine nucleotide exchange factor (GEF) 10-like b [Source:ZFIN;Acc:ZDB-GENE-090313-222]
14. nutf2l ENSDARG00000014499 3927 1.522 - - - - - 0.771 - 0.751 - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
15. SSTR5 ENSDARG00000101655 351 1.482 - 0.718 - - - 0.764 - - - somatostatin receptor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2502]
16. zgc:165653 ENSDARG00000104713 1603 1.474 - 0.703 - - - 0.771 - - - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
17. col6a2 ENSDARG00000061436 5063 1.472 - 0.746 - - - 0.726 - - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
18. nudcd1 ENSDARG00000036158 608 1.466 - 0.719 - - - 0.747 - - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
19. sgk2a ENSDARG00000063370 421 1.453 - 0.752 - - - 0.701 - - - serum/glucocorticoid regulated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9632]
20. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 1.453 - 0.744 - - - 0.709 - - - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
21. zfp36l1a ENSDARG00000016154 4305 1.435 - - - - - - - 0.726 0.709 zinc finger protein 36, C3H type-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9860]
22. cgnb ENSDARG00000058690 685 1.417 - 0.708 - - - 0.709 - - - cingulin b [Source:ZFIN;Acc:ZDB-GENE-050208-72]
23. smo ENSDARG00000002952 6411 0.995 - - 0.995 - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
24. toporsb ENSDARG00000105028 1898 0.992 - - 0.992 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
25. CABZ01029822.1 ENSDARG00000086931 1654 0.992 - - 0.992 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
26. smarcal1 ENSDARG00000102265 1921 0.992 - - 0.992 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
27. blzf1 ENSDARG00000011299 2568 0.992 - - 0.992 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
28. mpz ENSDARG00000038609 1740 0.992 - - 0.992 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
29. NSMCE2 ENSDARG00000076379 2133 0.991 - - 0.991 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
30. HPCAL1 ENSDARG00000022763 2885 0.991 - - 0.991 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
31. tfdp1b ENSDARG00000016304 3071 0.991 - - 0.991 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
32. timmdc1 ENSDARG00000053466 2179 0.991 - - 0.991 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
33. cops2 ENSDARG00000004785 4911 0.991 - - 0.991 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
34. ik ENSDARG00000004161 3132 0.991 - - 0.991 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
35. lamtor2 ENSDARG00000039872 3250 0.991 - - 0.991 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
36. eif2ak3 ENSDARG00000062139 3276 0.991 - - 0.991 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
37. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.991 - - 0.991 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
38. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.99 - - 0.990 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
39. kazald2 ENSDARG00000078518 3062 0.99 - - 0.990 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
40. bdh1 ENSDARG00000059388 3390 0.99 - - 0.990 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
41. commd4 ENSDARG00000061946 3281 0.99 - - 0.990 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
42. khdrbs1b ENSDARG00000070475 18157 0.99 - - 0.990 - - - - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
43. mrpl12 ENSDARG00000038768 5539 0.99 - - 0.990 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
44. glrx ENSDARG00000028106 16225 0.989 - - 0.989 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
45. ash2l ENSDARG00000060392 4916 0.989 - - 0.989 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
46. mef2d ENSDARG00000040237 6144 0.989 - - 0.989 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
47. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.988 - - 0.988 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
48. dlx3b ENSDARG00000014626 3647 0.987 - - 0.987 - - - - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
49. fbn2b ENSDARG00000098237 10835 0.987 - - 0.987 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
50. arhgap1 ENSDARG00000024324 6904 0.986 - - 0.986 - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
51. aurkb ENSDARG00000037640 4874 0.986 - - 0.986 - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
52. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.985 - - 0.985 - - - - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
53. srsf3b ENSDARG00000059360 14888 0.985 - - 0.985 - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
54. ube2e1 ENSDARG00000116649 10656 0.984 - - 0.984 - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
55. hmga2 ENSDARG00000069912 20402 0.983 - - 0.983 - - - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
56. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 0.975 - - 0.975 - - - - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
57. ost4 ENSDARG00000096118 7679 0.975 - - 0.975 - - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
58. rps20 ENSDARG00000036044 121457 0.974 - - 0.974 - - - - - - ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
59. fmr1 ENSDARG00000037433 5132 0.972 - - 0.972 - - - - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
60. rplp2l ENSDARG00000011201 77026 0.97 - - 0.970 - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
61. zgc:92061 zgc:92061 21304 0.969 - - 0.969 - - - - - -
62. sf3a1 ENSDARG00000041887 6702 0.963 - - 0.963 - - - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
63. ywhabb ENSDARG00000075758 23104 0.963 - - 0.963 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
64. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 0.963 - - 0.963 - - - - - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
65. znf865 ENSDARG00000036698 15532 0.959 - - 0.959 - - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
66. erh ENSDARG00000032866 20633 0.953 - - 0.953 - - - - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
67. GTSE1 ENSDARG00000013719 1115 0.942 - - - - - - - 0.942 - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
68. cdk16_1 ENSDARG00000032072 2031 0.94 - - - - - - - 0.940 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
69. ctsz ENSDARG00000043081 1073 0.94 - - - - - - - 0.940 - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
70. rnf216 ENSDARG00000087893 518 0.938 - - - - - - - 0.938 - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
71. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 0.937 - - - - - - - 0.937 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
72. dock7 ENSDARG00000078675 1995 0.936 - - - - - - - 0.936 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
73. FBXL3 FBXL3 1769 0.935 - - - - - - - 0.935 -
74. PRKDC ENSDARG00000075083 693 0.933 - - - - - - - 0.933 - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
75. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 0.933 - - - - - - - 0.933 - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
76. prkag1 ENSDARG00000003818 2800 0.933 - - - - - - - 0.933 - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
77. CR387996.1 ENSDARG00000097774 3037 0.93 - - - - - - - 0.930 -
78. ghitm 1443 0.93 - - - - - - - 0.930 - growth hormone inducible transmembrane protein
79. si:ch211-113a14.18 ENSDARG00000051735 1253 0.929 - - - - - - - 0.929 - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
80. DEDD ENSDARG00000029783 530 0.929 - - - - - - - 0.929 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
81. arih2 ENSDARG00000012848 7087 0.929 - - - - - - - 0.929 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
82. pold3 ENSDARG00000076169 694 0.929 - - - - - - - 0.929 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
83. suco ENSDARG00000016532 1609 0.928 - - - - - - - 0.928 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
84. TTC28 ENSDARG00000114920 580 0.928 - - - - - - - 0.928 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
85. pcdh10b ENSDARG00000102824 732 0.927 - - - - - - - 0.927 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
86. CD99L2 ENSDARG00000056722 5588 0.927 - - - - - - - 0.927 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
87. B3GNT1 B3GNT1 601 0.927 - - - - - - - 0.927 -
88. si:ch211-195b13.1 ENSDARG00000016623 427 0.927 - - - - - - - 0.927 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
89. CR354611.2 CR354611.2 2040 0.927 - - - - - - - 0.927 -
90. E2F1 ENSDARG00000103868 638 0.927 - - - - - - - 0.927 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
91. zgc:171727 ENSDARG00000105781 350 0.927 - - - - - - - 0.927 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
92. med20 ENSDARG00000046006 614 0.927 - - - - - - - 0.927 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
93. phf12a ENSDARG00000074303 1025 0.927 - - - - - - - 0.927 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
94. dok7 ENSDARG00000060236 364 0.927 - - - - - - - 0.927 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
95. wdr92 ENSDARG00000037334 329 0.927 - - - - - - - 0.927 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
96. grna ENSDARG00000004954 189 0.926 - - - - - - - 0.926 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
97. nkain4 ENSDARG00000062699 377 0.926 - - - - - - - 0.926 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
98. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.926 - - - - - - - 0.926 - kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
99. SIPA1L3 ENSDARG00000061699 268 0.926 - - - - - - - 0.926 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
100. KIRREL3 ENSDARG00000115903 206 0.926 - - - - - - - 0.926 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]

There are 765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA