Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-132f6.4

Gene Name Gene ID Reads Annotation
si:ch73-132f6.4 si:ch73-132f6.4 235










Genes with expression patterns similar to si:ch73-132f6.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-132f6.4 si:ch73-132f6.4 235 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. tmem206 ENSDARG00000012271 508 1.592 0.884 - - - - - 0.708 - - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
3. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 1.519 - - - - - 0.735 0.784 - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
4. mppe1 ENSDARG00000045416 340 1.47 - - - - - 0.761 0.709 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
5. mipep ENSDARG00000055344 63 1.435 - 0.707 - - - 0.728 - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
6. MAN2A2 ENSDARG00000063101 922 1.416 - - - - - 0.715 0.701 - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
7. foxa1 ENSDARG00000102138 1797 1.413 - 0.706 - - - - 0.707 - - forkhead box A1 [Source:ZFIN;Acc:ZDB-GENE-990415-78]
8. ccrl1b ccrl1b 154 0.932 - 0.932 - - - - - - -
9. KIRREL3 ENSDARG00000115903 206 0.929 - 0.929 - - - - - - - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
10. arhgef28 ENSDARG00000060415 142 0.921 - 0.921 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
11. nfybb ENSDARG00000045611, ENSDARG00000110926 350 0.921 - - - - - 0.921 - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
12. ap4b1 ENSDARG00000013726 382 0.9 - 0.900 - - - - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
13. CABZ01073112.1 CABZ01073112.1 40 0.896 - 0.896 - - - - - - -
14. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 0.892 - 0.892 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
15. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 0.892 - 0.892 - - - - - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
16. LAMTOR1 ENSDARG00000076464 27 0.879 - 0.879 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
17. b2m ENSDARG00000053136 215 0.857 - - - - - 0.857 - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
18. cab39l ENSDARG00000036658 204 0.854 - 0.854 - - - - - - - calcium binding protein 39-like [Source:ZFIN;Acc:ZDB-GENE-041114-204]
19. abca2 ENSDARG00000013500 91 0.853 - 0.853 - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-1]
20. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 0.853 - 0.853 - - - - - - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
21. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.85 - - - - - 0.850 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
22. GSTK1_1 GSTK1_1 316 0.849 - - - - - - 0.849 - -
23. fgfr1op2 ENSDARG00000009657 904 0.847 - - - - - 0.847 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
24. DNAJC16_1 DNAJC16_1 245 0.846 - 0.846 - - - - - - -
25. zgc:112175 ENSDARG00000037810 402 0.846 - - - - - - 0.846 - - zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
26. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.841 - 0.841 - - - - - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
27. CELF6 ENSDARG00000101933 228 0.841 - - - - - 0.841 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
28. si:dkey-253d23.8 ENSDARG00000094427 26 0.841 - 0.841 - - - - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
29. FAM175B FAM175B 23 0.841 - 0.841 - - - - - - -
30. ripply2 ENSDARG00000070535 18 0.841 - 0.841 - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
31. sall1b ENSDARG00000075891 32 0.841 - 0.841 - - - - - - - spalt-like transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-020228-3]
32. ncs1b ENSDARG00000054186 252 0.841 - 0.841 - - - - - - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
33. si:ch211-260c23.1 13 0.841 - 0.841 - - - - - - - si:ch211-260c23.1, transcript variant X7
34. SAC3D1 SAC3D1 72 0.841 - 0.841 - - - - - - -
35. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 0.841 - 0.841 - - - - - - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
36. polg2 ENSDARG00000074933 117 0.841 - 0.841 - - - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
37. RNF39 RNF39 52 0.841 - 0.841 - - - - - - -
38. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 0.841 - 0.841 - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
39. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 0.841 - 0.841 - - - - - - - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
40. rps6ka1 ENSDARG00000033437 366 0.841 - 0.841 - - - - - - - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
41. FNDC3A ENSDARG00000105503 11 0.841 - 0.841 - - - - - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
42. slco1c1 ENSDARG00000016749 30 0.841 - 0.841 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
43. BX323064.1 ENSDARG00000099914 11 0.841 - 0.841 - - - - - - -
44. mnd1 ENSDARG00000074451 182 0.84 - - - - - 0.840 - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
45. slc30a4 ENSDARG00000007180 158 0.838 0.838 - - - - - - - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
46. ndrg3a ENSDARG00000013087 5581 0.836 - - - - - 0.836 - - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
47. uqcrfs1 ENSDARG00000007745 4654 0.834 - - - - - 0.834 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
48. ormdl3 ENSDARG00000025555, ENSDARG00000110450 70 0.829 - 0.829 - - - - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:ZFIN;Acc:ZDB-GENE-041010-190]
49. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 0.828 - 0.828 - - - - - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
50. APH1A APH1A 129 0.828 - 0.828 - - - - - - -
51. ankha ENSDARG00000071724 23 0.828 - 0.828 - - - - - - - ANKH inorganic pyrophosphate transport regulator a [Source:ZFIN;Acc:ZDB-GENE-050913-33]
52. nme6 ENSDARG00000016138 207 0.826 - - - - - 0.826 - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
53. CT867948.2 CT867948.2 131 0.826 - 0.826 - - - - - - -
54. lrpprc ENSDARG00000043970 3847 0.825 - - - - - 0.825 - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
55. zgc:100832 ENSDARG00000012035 462 0.825 - - - - - - 0.825 - - zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
56. tasp1 ENSDARG00000060580 453 0.823 0.823 - - - - - - - - taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]
57. gtf3c6 ENSDARG00000043301 97 0.823 - 0.823 - - - - - - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
58. mybpha ENSDARG00000058799 53 0.822 - 0.822 - - - - - - - myosin binding protein Ha [Source:ZFIN;Acc:ZDB-GENE-040426-1531]
59. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.822 - - - - - 0.822 - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
60. fastkd2 ENSDARG00000074031 748 0.821 - - - - - - 0.821 - - FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
61. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.821 - - - - - 0.821 - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
62. adsl ENSDARG00000017049, ENSDARG00000111547, ENSDARG00000116659 1430 0.82 - - - - - - 0.820 - - adenylosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-030131-6363]
63. tmem63a ENSDARG00000031956 112 0.819 - 0.819 - - - - - - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
64. si:dkey-231k6.4 si:dkey-231k6.4 72 0.819 - 0.819 - - - - - - -
65. coil ENSDARG00000040070 863 0.819 - - - - - 0.819 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
66. ANO7 ANO7 54 0.816 - 0.816 - - - - - - -
67. nt5e ENSDARG00000071017 18 0.816 - 0.816 - - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
68. si:dkey-11f4.16 ENSDARG00000099799 121 0.816 - 0.816 - - - - - - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
69. sla1 ENSDARG00000054340 95 0.816 - 0.816 - - - - - - - Src-like-adaptor 1 [Source:ZFIN;Acc:ZDB-GENE-050904-3]
70. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 0.814 - - - - - - 0.814 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
71. KIF21A_1 KIF21A_1 237 0.814 - - - - - 0.814 - - -
72. dhrs11b ENSDARG00000031299 409 0.813 - - - - - - 0.813 - - dehydrogenase/reductase (SDR family) member 11b [Source:ZFIN;Acc:ZDB-GENE-040625-155]
73. FARS2 ENSDARG00000091247 202 0.813 - - - - - - 0.813 - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
74. RBM12B_1 RBM12B_1 1192 0.812 0.812 - - - - - - - -
75. noc3l ENSDARG00000002487 230 0.811 - - - - - 0.811 - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
76. abhd14b ENSDARG00000100531 333 0.809 0.809 - - - - - - - - abhydrolase domain containing 14B [Source:ZFIN;Acc:ZDB-GENE-040426-1342]
77. elp6 ENSDARG00000060445, ENSDARG00000115612 458 0.807 - - - - - 0.807 - - - elongator acetyltransferase complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-060825-249]
78. dnal1 ENSDARG00000034042 339 0.804 - - - - - 0.804 - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
79. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 0.804 - - - - - 0.804 - - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
80. r3hcc1l ENSDARG00000089243 1254 0.803 - - - - - 0.803 - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
81. ptpn2b ENSDARG00000035986 909 0.801 - - - - - - 0.801 - - protein tyrosine phosphatase, non-receptor type 2, b [Source:ZFIN;Acc:ZDB-GENE-030909-8]
82. rltpr 258 0.801 - - - - - 0.801 - - - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
83. acot13 ENSDARG00000061728, ENSDARG00000114746 516 0.801 - - - - - 0.801 - - - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
84. phyh ENSDARG00000086740 88 0.8 - 0.800 - - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
85. KIAA0355 3250 0.799 - - - - - - 0.799 - - KIAA0355 ortholog, transcript variant X1
86. fbln2 ENSDARG00000015156 1694 0.798 - - - - - 0.798 - - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
87. CU467824.1 CU467824.1 76 0.798 - 0.798 - - - - - - -
88. dhrs12 ENSDARG00000011770 795 0.798 - - - - - - 0.798 - - dehydrogenase/reductase (SDR family) member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-1134]
89. ODF3L2 40 0.797 - - - - - 0.797 - - - outer dense fiber of sperm tails 3-like 2
90. megf10 ENSDARG00000017229 656 0.797 - 0.797 - - - - - - - multiple EGF-like-domains 10 [Source:ZFIN;Acc:ZDB-GENE-080506-1]
91. tnfaip8 tnfaip8 1170 0.796 - - - - - 0.796 - - -
92. snn ENSDARG00000099888 399 0.796 - - - - - - 0.796 - - stannin [Source:ZFIN;Acc:ZDB-GENE-040426-1987]
93. marveld3 ENSDARG00000099654 113 0.796 - - - - - 0.796 - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
94. arglu1b ENSDARG00000018319 1110 0.795 - - - - - - 0.795 - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
95. SNORD18 SNORD18 175 0.795 - - - - - - 0.795 - -
96. pex7 ENSDARG00000042553 409 0.795 0.795 - - - - - - - - peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
97. pex11g ENSDARG00000025559 129 0.795 0.795 - - - - - - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
98. si:ch73-55c23.2 si:ch73-55c23.2 105 0.794 - - - - - 0.794 - - -
99. ubl3b ENSDARG00000021556 1210 0.794 - - - - - - 0.794 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
100. stac3 ENSDARG00000098883 1765 0.794 - 0.794 - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]

There are 451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA