Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-127m5.2

Gene Name Gene ID Reads Annotation
si:ch73-127m5.2 ENSDARG00000096797 429 si:ch73-127m5.2 [Source:ZFIN;Acc:ZDB-GENE-030131-1052]










Genes with expression patterns similar to si:ch73-127m5.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-127m5.2 ENSDARG00000096797 429 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-127m5.2 [Source:ZFIN;Acc:ZDB-GENE-030131-1052]
2. BX548000.3 BX548000.3 241 2.273 0.768 0.771 - - - - 0.734 - -
3. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.538 - 0.790 - - - - 0.748 - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
4. krr1 ENSDARG00000011246 1624 1.538 - 0.786 - - - 0.752 - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
5. nfe2l1a ENSDARG00000030616, ENSDARG00000116760 68 1.525 0.772 - - - - - 0.753 - - nuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
6. ENSDARG00000035683 ENSDARG00000035683 219 1.524 0.815 - - - - - 0.709 - -
7. itga11a ENSDARG00000036086, ENSDARG00000111495 254 1.512 - 0.733 - - - - 0.779 - - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
8. si:dkey-260j18.2 ENSDARG00000101942 450 1.499 - 0.755 - - - - - 0.744 - si:dkey-260j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3956]
9. znf592 ENSDARG00000060885 776 1.495 - - - - - - 0.714 0.781 - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
10. rrp36 ENSDARG00000032516, ENSDARG00000109916 916 1.484 - 0.707 - - - 0.777 - - - ribosomal RNA processing 36 [Source:ZFIN;Acc:ZDB-GENE-030131-9751]
11. si:ch73-138e16.8 175 1.453 0.703 - - - - - 0.750 - - si:ch73-138e16.8
12. FP236789.2 FP236789.2 335 1.414 0.712 - - - - - 0.702 - -
13. lrrc47 ENSDARG00000053138 417 0.924 - - - - - - 0.924 - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
14. tmem63bb ENSDARG00000106631 503 0.908 - - - - - - 0.908 - - transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
15. AMBRA1 AMBRA1 382 0.898 - 0.898 - - - - - - -
16. sars2 ENSDARG00000102736 206 0.882 - - - - - - 0.882 - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
17. CT573152.3 CT573152.3 206 0.866 - - - - - - 0.866 - -
18. deptor ENSDARG00000040930 191 0.866 - - - - - - 0.866 - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
19. arvcfb ENSDARG00000061688 2388 0.865 - 0.865 - - - - - - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
20. slc43a1b ENSDARG00000037748 1406 0.865 - 0.865 - - - - - - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
21. CR385063.1 CR385063.1 590 0.864 - 0.864 - - - - - - -
22. CEACAM7 CEACAM7 46 0.863 0.863 - - - - - - - -
23. vcanb ENSDARG00000009401 3611 0.862 - 0.862 - - - - - - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
24. pigt ENSDARG00000075842 210 0.862 0.862 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
25. cables1 ENSDARG00000099395 361 0.856 - - - - - - 0.856 - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
26. BX088524.2 ENSDARG00000103268 564 0.853 - 0.853 - - - - - - -
27. eef2k ENSDARG00000035835 2906 0.853 - 0.853 - - - - - - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
28. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.852 - - - - - - 0.852 - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
29. si:ch211-197l9.2 ENSDARG00000078244 655 0.852 - 0.852 - - - - - - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
30. tmem129 ENSDARG00000075346 109 0.85 - - - - - - 0.850 - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
31. myog ENSDARG00000009438 2368 0.848 - 0.848 - - - - - - - myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265]
32. rnf139 ENSDARG00000036929 494 0.846 - 0.846 - - - - - - - ring finger protein 139 [Source:ZFIN;Acc:ZDB-GENE-080401-4]
33. cd248b ENSDARG00000077938 2561 0.846 - 0.846 - - - - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
34. c1qtnf6a ENSDARG00000055175 335 0.845 - 0.845 - - - - - - - C1q and TNF related 6a [Source:ZFIN;Acc:ZDB-GENE-080108-3]
35. klhl21 ENSDARG00000039255 2550 0.843 - 0.843 - - - - - - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
36. cdon ENSDARG00000061328 1441 0.843 - 0.843 - - - - - - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
37. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.843 - - - - - - 0.843 - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
38. rbm19 ENSDARG00000042590, ENSDARG00000112734 542 0.843 - - - - - - 0.843 - - RNA binding motif protein 19 [Source:ZFIN;Acc:ZDB-GENE-031125-3]
39. cog8 ENSDARG00000002798 229 0.842 - 0.842 - - - - - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
40. scnm1 ENSDARG00000003027 256 0.842 - - - - - - 0.842 - - sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
41. CABZ01071909.1_1 ENSDARG00000117524 86 0.839 - - - - - - 0.839 - -
42. ap4s1 ENSDARG00000054220 346 0.838 - 0.838 - - - - - - - adaptor related protein complex 4 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-030616-404]
43. st3gal3a ENSDARG00000015374 2360 0.838 - 0.838 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
44. sh3tc2 ENSDARG00000089917 415 0.838 - 0.838 - - - - - - - SH3 domain and tetratricopeptide repeats 2 [Source:ZFIN;Acc:ZDB-GENE-081104-347]
45. ZCCHC2 ENSDARG00000067950 204 0.837 - 0.837 - - - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
46. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 0.835 - 0.835 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
47. ncapg2 ENSDARG00000060023 993 0.834 - 0.834 - - - - - - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
48. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.832 - 0.832 - - - - - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
49. timm44 ENSDARG00000104771 98 0.829 - 0.829 - - - - - - - translocase of inner mitochondrial membrane 44 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-145]
50. FHOD3_1 FHOD3_1 983 0.828 - 0.828 - - - - - - -
51. scly ENSDARG00000073813 578 0.826 - 0.826 - - - - - - - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
52. babam1 ENSDARG00000077526 776 0.825 0.825 - - - - - - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
53. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 0.825 - 0.825 - - - - - - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
54. PARP6_1 PARP6_1 331 0.824 0.824 - - - - - - - -
55. ITGAL ITGAL 277 0.824 0.824 - - - - - - - -
56. KLHL29_1 KLHL29_1 158 0.823 - - - - - - 0.823 - -
57. CR383676.3 CR383676.3 2650 0.822 - - - - - - 0.822 - -
58. endog ENSDARG00000058865 679 0.821 - - - - - - 0.821 - - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
59. epas1b ENSDARG00000057671, ENSDARG00000113561, ENSDARG00000115742 1306 0.819 - 0.819 - - - - - - - endothelial PAS domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-060607-11]
60. tab1 ENSDARG00000036613 445 0.819 - - - - - - 0.819 - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
61. fam175a fam175a 224 0.818 0.818 - - - - - - - -
62. MBTD1 ENSDARG00000060868 783 0.817 - - - - - - 0.817 - - mbt domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-138]
63. ptpn11b ENSDARG00000012340, ENSDARG00000114232 604 0.817 - 0.817 - - - - - - - protein tyrosine phosphatase, non-receptor type 11, b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]
64. BX511021.1 ENSDARG00000073936 647 0.815 - 0.815 - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
65. BCR ENSDARG00000079286 389 0.812 - 0.812 - - - - - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
66. phf16 phf16 1116 0.812 - 0.812 - - - - - - -
67. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.812 0.812 - - - - - - - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
68. itga1 ENSDARG00000074316, ENSDARG00000116602 610 0.812 - - - - - - 0.812 - - integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]
69. CENPT CENPT 330 0.812 0.812 - - - - - - - -
70. cldn15la ENSDARG00000016081 197 0.811 0.811 - - - - - - - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
71. ddit3 ENSDARG00000059836 334 0.811 - - - - - - 0.811 - - DNA-damage-inducible transcript 3 [Source:ZFIN;Acc:ZDB-GENE-070410-90]
72. mao ENSDARG00000023712 1448 0.811 - - - - - - 0.811 - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
73. rabl3 ENSDARG00000040959 271 0.81 0.810 - - - - - - - - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
74. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 0.809 - - - - - - 0.809 - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
75. CABZ01102038.1 ENSDARG00000116210 132 0.809 - 0.809 - - - - - - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
76. acadl ENSDARG00000088357, ENSDARG00000115321 1179 0.809 - 0.809 - - - - - - - acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
77. gb:ai877918 ENSDARG00000100179 173 0.808 0.808 - - - - - - - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
78. tmem194b tmem194b 724 0.808 - - - - - - 0.808 - -
79. anapc7 ENSDARG00000063005 1139 0.807 - - - - - - 0.807 - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
80. ggctb ENSDARG00000005085 704 0.806 - 0.806 - - - - - - - gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
81. prmt3 ENSDARG00000019791 268 0.806 - 0.806 - - - - - - - protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1]
82. tmem242 ENSDARG00000037070 1081 0.806 - 0.806 - - - - - - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
83. snoMBII-202_2 snoMBII-202_2 72 0.805 0.805 - - - - - - - -
84. pogzb ENSDARG00000076542, ENSDARG00000113904 787 0.804 - - - - - - 0.804 - - pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3]
85. atraid ENSDARG00000043388 648 0.804 - - - - - - 0.804 - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]
86. TJP1 TJP1 153 0.803 - 0.803 - - - - - - -
87. pex12 ENSDARG00000035149 175 0.802 - 0.802 - - - - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
88. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 0.802 0.802 - - - - - - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
89. ndufs8b ENSDARG00000057055 10 0.802 0.802 - - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
90. gpd1l ENSDARG00000040024 2182 0.802 - 0.802 - - - - - - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
91. obfc1 obfc1 156 0.802 0.802 - - - - - - - -
92. nob1 ENSDARG00000016080 2483 0.801 - - - - - - 0.801 - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
93. dpp3 ENSDARG00000020676 2393 0.8 0.800 - - - - - - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
94. ITCH ITCH 1226 0.8 - 0.800 - - - - - - -
95. st8sia4 ENSDARG00000103600 198 0.8 - - - - - - 0.800 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
96. UFSP1 ENSDARG00000061610 81 0.799 - - - - - - 0.799 - - UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
97. CU013533.1 CU013533.1 108 0.799 - - - - - - 0.799 - -
98. cdkal1 ENSDARG00000104848 2102 0.798 - 0.798 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
99. LRIF1 LRIF1 135 0.797 - - - - - - 0.797 - -
100. loh12cr1 loh12cr1 346 0.797 - - - - - - 0.797 - -

There are 682 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA