Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-116o1.3

Gene Name Gene ID Reads Annotation
si:ch73-116o1.3 si:ch73-116o1.3 1










Genes with expression patterns similar to si:ch73-116o1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-57a22.12 si:dkey-57a22.12 23 2 - - - - 1.000 1.000 - - -
2. si:ch73-116o1.3 si:ch73-116o1.3 1 2 - - - - 1.000 1.000 - - -
3. abcd1 ENSDARG00000074876 6 2 - - - - 1.000 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
4. gnai3 ENSDARG00000030644 29 1.748 - - - - 0.877 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
5. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
6. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
7. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
8. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
9. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
10. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
11. wibg wibg 2 1 - - - - 1.000 - - - -
12. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
13. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
14. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
15. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
16. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
17. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
18. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
19. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
20. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
21. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
22. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
23. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
24. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
25. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
26. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
27. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
28. BIN1 BIN1 11 1 - - - - 1.000 - - - -
29. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
30. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
31. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
32. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
33. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
34. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
35. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
36. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
37. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
38. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
39. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
40. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
41. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
42. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
43. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
44. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
45. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
46. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
47. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
48. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
49. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
50. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
51. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
52. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
53. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
54. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
55. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
56. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
57. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
58. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
59. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
60. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
61. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
62. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
63. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
64. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
65. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
66. mir124-1 10 1 - - - - - 1.000 - - - microRNA 124-1
67. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
68. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
69. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
70. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
71. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
72. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
73. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
74. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
75. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
76. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
77. U8 U8 11 1 - - - - 1.000 - - - -
78. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
79. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
80. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
81. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
82. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
83. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
84. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
85. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
86. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
87. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
88. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
89. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
90. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
91. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
92. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
93. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
94. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
95. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
96. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
97. EXT1 EXT1 3 1 - - - - - 1.000 - - -
98. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
99. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
100. MOB2 MOB2 4 1 - - - - 1.000 - - - -

There are 417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA