Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-116o1.3

Gene Name Gene ID Reads Annotation
si:ch73-116o1.3 si:ch73-116o1.3 1










Genes with expression patterns similar to si:ch73-116o1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-116o1.3 si:ch73-116o1.3 1 2 - - - - 1.000 1.000 - - -
2. si:dkey-57a22.12 si:dkey-57a22.12 23 2 - - - - 1.000 1.000 - - -
3. abcd1 ENSDARG00000074876 6 2 - - - - 1.000 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
4. gnai3 ENSDARG00000030644 29 1.748 - - - - 0.877 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
5. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
6. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
7. U1_18 U1_18 0 1 - - - - 1.000 - - - -
8. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
9. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
10. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
11. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
12. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
13. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
14. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
15. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
16. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
17. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
18. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
19. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
20. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
21. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
22. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
23. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
24. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
25. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
26. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
27. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
28. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
29. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
30. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
31. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
32. fam5b fam5b 45 1 - - - - - 1.000 - - -
33. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
34. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
35. F13A1 F13A1 1 1 - - - - 1.000 - - - -
36. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
37. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
38. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
39. dapk2 dapk2 24 1 - - - - - 1.000 - - -
40. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
41. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
42. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
43. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
44. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
45. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
46. EXT1 EXT1 3 1 - - - - - 1.000 - - -
47. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
48. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
49. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
50. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
51. taar14l ENSDARG00000069213 11 1 - - - - 1.000 - - - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
52. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
53. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
54. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
55. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
56. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - 1.000 - - - -
57. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
58. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
59. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
60. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
61. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
62. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
63. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
64. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
65. hip1r hip1r 10 1 - - - - - 1.000 - - -
66. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
67. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
68. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
69. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
70. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
71. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
72. BIN1 BIN1 11 1 - - - - 1.000 - - - -
73. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
74. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
75. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
76. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
77. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
78. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
79. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
80. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
81. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
82. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
83. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
84. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
85. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
86. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
87. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
88. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
89. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
90. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
91. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
92. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
93. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
94. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
95. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
96. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
97. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
98. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
99. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
100. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -

There are 417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA