Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-116o1.3

Gene Name Gene ID Reads Annotation
si:ch73-116o1.3 si:ch73-116o1.3 1










Genes with expression patterns similar to si:ch73-116o1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-57a22.12 si:dkey-57a22.12 23 2 - - - - 1.000 1.000 - - -
2. si:ch73-116o1.3 si:ch73-116o1.3 1 2 - - - - 1.000 1.000 - - -
3. abcd1 ENSDARG00000074876 6 2 - - - - 1.000 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
4. gnai3 ENSDARG00000030644 29 1.748 - - - - 0.877 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
5. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
6. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
7. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
8. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
9. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
10. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
11. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
12. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
13. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
14. F13A1 F13A1 1 1 - - - - 1.000 - - - -
15. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
16. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
17. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
18. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
19. ODF2 ODF2 6 1 - - - - 1.000 - - - -
20. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
21. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
22. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
23. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
24. DKK3 DKK3 12 1 - - - - - 1.000 - - -
25. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
26. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
27. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
28. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
29. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
30. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
31. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
32. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
33. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
34. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
35. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
36. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
37. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
38. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
39. hip1r hip1r 10 1 - - - - - 1.000 - - -
40. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
41. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
42. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
43. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
44. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
45. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
46. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
47. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
48. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
49. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
50. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
51. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
52. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
53. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
54. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
55. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
56. wibg wibg 2 1 - - - - 1.000 - - - -
57. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
58. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
59. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
60. EXT1 EXT1 3 1 - - - - - 1.000 - - -
61. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
62. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
63. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
64. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
65. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
66. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
67. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
68. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
69. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
70. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
71. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
72. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
73. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
74. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
75. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
76. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
77. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
78. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
79. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
80. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
81. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
82. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
83. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
84. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
85. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
86. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
87. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
88. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
89. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
90. itm1 itm1 32 1 - - - - - 1.000 - - -
91. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
92. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
93. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
94. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
95. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
96. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
97. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
98. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
99. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
100. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -

There are 417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA