Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-116o1.3

Gene Name Gene ID Reads Annotation
si:ch73-116o1.3 si:ch73-116o1.3 1










Genes with expression patterns similar to si:ch73-116o1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-116o1.3 si:ch73-116o1.3 1 2 - - - - 1.000 1.000 - - -
2. si:dkey-57a22.12 si:dkey-57a22.12 23 2 - - - - 1.000 1.000 - - -
3. abcd1 ENSDARG00000074876 6 2 - - - - 1.000 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
4. gnai3 ENSDARG00000030644 29 1.748 - - - - 0.877 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
5. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
6. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
7. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
8. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
9. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
10. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
11. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
12. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
13. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
14. itm1 itm1 32 1 - - - - - 1.000 - - -
15. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
16. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
17. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
18. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
19. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
20. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
21. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
22. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
23. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
24. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
25. MOB2 MOB2 4 1 - - - - 1.000 - - - -
26. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
27. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
28. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
29. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
30. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
31. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
32. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
33. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
34. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
35. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
36. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
37. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
38. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
39. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
40. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
41. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
42. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
43. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
44. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
45. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
46. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
47. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
48. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
49. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
50. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
51. EXT1 EXT1 3 1 - - - - - 1.000 - - -
52. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
53. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
54. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
55. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
56. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
57. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
58. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
59. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
60. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
61. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
62. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
63. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
64. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
65. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
66. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
67. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
68. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
69. hip1r hip1r 10 1 - - - - - 1.000 - - -
70. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
71. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
72. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
73. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
74. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
75. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
76. wibg wibg 2 1 - - - - 1.000 - - - -
77. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
78. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
79. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
80. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
81. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
82. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
83. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
84. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
85. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
86. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
87. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
88. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
89. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
90. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
91. F13A1 F13A1 1 1 - - - - 1.000 - - - -
92. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
93. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
94. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
95. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
96. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
97. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
98. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
99. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
100. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -

There are 417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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