Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-116o1.3

Gene Name Gene ID Reads Annotation
si:ch73-116o1.3 si:ch73-116o1.3 1










Genes with expression patterns similar to si:ch73-116o1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-116o1.3 si:ch73-116o1.3 1 2 - - - - 1.000 1.000 - - -
2. si:dkey-57a22.12 si:dkey-57a22.12 23 2 - - - - 1.000 1.000 - - -
3. abcd1 ENSDARG00000074876 6 2 - - - - 1.000 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
4. gnai3 ENSDARG00000030644 29 1.748 - - - - 0.877 0.871 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
5. BIN1 BIN1 11 1 - - - - 1.000 - - - -
6. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
7. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
8. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
9. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
10. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
11. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
12. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
13. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
14. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
15. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
16. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
17. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
18. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
19. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
20. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
21. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
22. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
23. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
24. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
25. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
26. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
27. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
28. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
29. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
30. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
31. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
32. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
33. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
34. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
35. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
36. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - 1.000 - - - -
37. si:ch211-69k21.3 si:ch211-69k21.3 3 1 - - - - 1.000 - - - -
38. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
39. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
40. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
41. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
42. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
43. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
44. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
45. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
46. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
47. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
48. nlgn4b 1 1 - - - - 1.000 - - - - neuroligin 4b, transcript variant X1
49. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
50. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
51. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
52. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
53. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
54. CST7 CST7 22 1 - - - - 1.000 - - - -
55. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
56. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
57. 5S_rRNA_5 5S_rRNA_5 1 1 - - - - 1.000 - - - -
58. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
59. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
60. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
61. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
62. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
63. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
64. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
65. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
66. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
67. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
68. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
69. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
70. U1_18 U1_18 0 1 - - - - 1.000 - - - -
71. SSTR2 SSTR2 12 1 - - - - 1.000 - - - -
72. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
73. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
74. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
75. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
76. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
77. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
78. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
79. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
80. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
81. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
82. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
83. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
84. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
85. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
86. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
87. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
88. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
89. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
90. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
91. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
92. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
93. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
94. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
95. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
96. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
97. F13A1 F13A1 1 1 - - - - 1.000 - - - -
98. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
99. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
100. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -

There are 417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA